RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 C20orf144Q9BQM9 153 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 SMIM27A0A1W2PRY6 76 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 K7EP34 96 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 TRBV12-3P01733 135 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 PRR25Q96S07 402 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 SS18L2Q9UHA2 77 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 U3KQE9 123 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 MAPK1IP1LQ8NDC0 245 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 SPRR3Q9UBC9 169 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 CUL9Q8IWT3 2517 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 IGLV10-54A0A075B6I4 117 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 TMEM14BQ9NUH8 114 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 LY6HO94772 140 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 COL8A2P25067 703 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 LINC01620Q4KN68 170 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 WFDC1Q9HC57 220 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 G3V318 75 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 C14orf177Q52M58 125 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 C18orf32Q8TCD1 76 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 LINC00479Q96M42 142 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 SIGLEC8Q9NYZ4 499 aa8.49□□□□□ -1.05
RTN3-206ENST00000377819 ABCA2Q9BZC7 2435 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 COLCA2A8K830 154 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 HGFACQ04756 655 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 MRPL51Q4U2R6 128 aaKnown RBP8.48□□□□□ -1.05
RTN3-206ENST00000377819 LINC01545Q5VT33 79 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 AMTNQ6UX39 209 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 CD177Q8N6Q3 437 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 A0A1W2PPM0 123 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 C1QCP02747 245 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 GYPEP15421 78 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 RUSC1-AS1Q66K80 236 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 TRBV19A0A075B6N1 114 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 C4orf51C9J302 202 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 IGHV3-30P01768 117 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 IGHV3-33P01772 117 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 IGHV3-30-3P0DP02 117 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 IGHV3-30-5P0DP03 117 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 COX8AP10176 69 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 SRSF3P84103 164 aaKnown RBP8.48□□□□□ -1.05
RTN3-206ENST00000377819 RNASE13Q5GAN3 156 aaKnown RBP8.48□□□□□ -1.05
RTN3-206ENST00000377819 DIRC1Q969H9 104 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 LYL1P12980 280 aa8.48□□□□□ -1.05
RTN3-206ENST00000377819 SHISA3A0PJX4 238 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 LY6G6FQ5SQ64 297 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 FOXI2Q6ZQN5 318 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 CEND1Q8N111 149 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 ZNF664Q8N3J9 261 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 K7EMI3 77 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 ZNF134P52741 427 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 GAFA1Q96PS6 74 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 IGLV3-32A0A0A0MS00 114 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 IGHV4OR15-8A0A075B7B6 117 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 A0A087WW49 117 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 IGKV1-12A0A0C4DH73 117 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 C15orf62A8K5M9 175 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 PRSS47A8MTI9 375 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 UPK3BQ9BT76 320 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 HIGD2AQ9BW72 106 aa8.47□□□□□ -1.05
RTN3-206ENST00000377819 LRCOL1A6NCL2 159 aa8.46□□□□□ -1.05
RTN3-206ENST00000377819 F8W735 103 aaPredicted RBP8.46□□□□□ -1.05
RTN3-206ENST00000377819 MLANAQ16655 118 aa8.46□□□□□ -1.05
RTN3-206ENST00000377819 MED13Q9UHV7 2174 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 A0A0G2JNJ9 132 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 TGFBR3LH3BV60 316 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 BPY2O14599 106 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 CRYGSP22914 178 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 CXCL5P42830 114 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 Q9UFV3 132 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 IGKV1D-8A0A087WSZ0 117 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 GP9P14770 177 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 Q6ZVH6 145 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 FAM110AQ9BQ89 295 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 C12orf74Q32Q52 190 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 Q8NFD4 153 aa8.46□□□□□ -1.06
RTN3-206ENST00000377819 FGF23Q9GZV9 251 aaPredicted RBP8.46□□□□□ -1.06
RTN3-206ENST00000377819 IGHV7-4-1A0A0J9YVY3 117 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 TRBV10-2A0A0K0K1G8 114 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 FAM240AA0A1B0GVK7 77 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 LINC00473A8K010 186 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 CCL24O00175 119 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 PRR20EP86478 221 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 PRR20CP86479 221 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 PRR20DP86480 221 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 PRR20BP86481 221 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 PRR20AP86496 221 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 GFI1Q99684 422 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 TRAV26-2A0A0B4J265 109 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 IGHV4-59P01825 116 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 KIAA1671Q9BY89 1806 aa8.45□□□□□ -1.06
RTN3-206ENST00000377819 FAM236AA0A1B0GUQ0 79 aa8.44□□□□□ -1.06
RTN3-206ENST00000377819 FAM236BA0A1B0GV22 79 aa8.44□□□□□ -1.06
RTN3-206ENST00000377819 LYPD2Q6UXB3 125 aa8.44□□□□□ -1.06
RTN3-206ENST00000377819 WFDC11Q8NEX6 87 aa8.44□□□□□ -1.06
RTN3-206ENST00000377819 SIVA1O15304 175 aa8.44□□□□□ -1.06
RTN3-206ENST00000377819 LHFPL1Q86WI0 220 aa8.44□□□□□ -1.06
RTN3-206ENST00000377819 PAQR4Q8N4S7 273 aaPredicted RBP8.44□□□□□ -1.06
RTN3-206ENST00000377819 TMEM105Q8N8V8 129 aa8.44□□□□□ -1.06
RTN3-206ENST00000377819 IGKV1-16P04430 117 aa8.44□□□□□ -1.06
RTN3-206ENST00000377819 SCN8AQ9UQD0 1980 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 220.2 ms