RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 DEFB135Q30KP9 77 aa9.44□□□□□ -0.9
CBWD3-203ENST00000377344 ANXA2RQ3ZCQ2 193 aa9.44□□□□□ -0.9
CBWD3-203ENST00000377344 C1orf158Q8N1D5 194 aa9.44□□□□□ -0.9
CBWD3-203ENST00000377344 C20orf144Q9BQM9 153 aa9.44□□□□□ -0.9
CBWD3-203ENST00000377344 GOLT1BQ9Y3E0 138 aa9.44□□□□□ -0.9
CBWD3-203ENST00000377344 H7BYZ3 331 aa9.43□□□□□ -0.9
CBWD3-203ENST00000377344 CSNK1G2-AS1Q8NCQ2 148 aa9.43□□□□□ -0.9
CBWD3-203ENST00000377344 IGHV1OR15-1A0A075B7D0 117 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 IGKV3D-20A0A0C4DH25 116 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 GRIFINA4D1Z8 144 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 CBY3A6NI87 242 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 UBE2CO00762 179 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 PPP1R2P9O14990 202 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 LINC01559Q495D7 138 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 TMEM256Q8N2U0 113 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 ANAPC16Q96DE5 110 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 KCNS1Q96KK3 526 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 V9GYV3 84 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 GZMBP10144 247 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 ATRAIDQ6UW56 229 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 MRAPQ8TCY5 172 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 PYGO2Q9BRQ0 406 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 TP53TG3Q9ULZ0 132 aa9.42□□□□□ -0.9
CBWD3-203ENST00000377344 XKRY2A2RUG3 117 aa9.41□□□□□ -0.9
CBWD3-203ENST00000377344 GNRH2O43555 120 aa9.41□□□□□ -0.9
CBWD3-203ENST00000377344 PRM2P04554 102 aa9.41□□□□□ -0.9
CBWD3-203ENST00000377344 RCHY1Q96PM5 261 aa9.41□□□□□ -0.9
CBWD3-203ENST00000377344 A8MWL6 223 aa9.4□□□□□ -0.9
CBWD3-203ENST00000377344 TYMSP04818 313 aa9.4□□□□□ -0.9
CBWD3-203ENST00000377344 TCL1AP56279 114 aa9.4□□□□□ -0.9
CBWD3-203ENST00000377344 TPPP3Q9BW30 176 aa9.4□□□□□ -0.9
CBWD3-203ENST00000377344 CTDSP1Q9GZU7 261 aa9.4□□□□□ -0.9
CBWD3-203ENST00000377344 S100A4P26447 101 aaKnown RBP9.4□□□□□ -0.91
CBWD3-203ENST00000377344 ASIPP42127 132 aa9.4□□□□□ -0.91
CBWD3-203ENST00000377344 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.91
CBWD3-203ENST00000377344 TDRG1Q3Y452 100 aa9.4□□□□□ -0.91
CBWD3-203ENST00000377344 CT83Q5H943 113 aa9.4□□□□□ -0.91
CBWD3-203ENST00000377344 ZNF705AQ6ZN79 300 aaPredicted RBP9.4□□□□□ -0.91
CBWD3-203ENST00000377344 Q6ZWC4 215 aa9.4□□□□□ -0.91
CBWD3-203ENST00000377344 TIMM8BQ9Y5J9 83 aaPredicted RBP9.4□□□□□ -0.91
CBWD3-203ENST00000377344 A0A087WWC5 75 aa9.39□□□□□ -0.91
CBWD3-203ENST00000377344 TSKUQ8WUA8 353 aa9.39□□□□□ -0.91
CBWD3-203ENST00000377344 TRGV11A0A075B6L2 103 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 SPRY2O43597 315 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 AZU1P20160 251 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 DEFA6Q01524 100 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 RRN3P1Q2M238 152 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 SBSPONQ8IVN8 264 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 RNF183Q96D59 192 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 IL36BQ9NZH7 164 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 H3BVH4 76 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 NEU1Q99519 415 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 LINC00467Q9BRT7 94 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 RETNQ9HD89 108 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 TMEM242Q9NWH2 141 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 MDFICQ9P1T7 246 aa9.38□□□□□ -0.91
CBWD3-203ENST00000377344 HIGD1CA8MV81 97 aa9.37□□□□□ -0.91
CBWD3-203ENST00000377344 FAM3BP58499 235 aaPredicted RBP9.37□□□□□ -0.91
CBWD3-203ENST00000377344 SSTP61278 116 aa9.37□□□□□ -0.91
CBWD3-203ENST00000377344 ZNF575Q86XF7 245 aa9.37□□□□□ -0.91
CBWD3-203ENST00000377344 FER1L6-AS1Q8NA97 138 aa9.37□□□□□ -0.91
CBWD3-203ENST00000377344 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
CBWD3-203ENST00000377344 URGCP-MRPS24S4R325 110 aa9.37□□□□□ -0.91
CBWD3-203ENST00000377344 IGHV3-16A0A0C4DH30 117 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 MUC21A0A0G2JKD1 596 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 MUC21A0A140T8X8 626 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 SCO1O75880 301 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 ARMS2P0C7Q2 107 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 S100PP25815 95 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 TMEM88Q6PEY1 159 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 PGLYRP4Q96LB8 373 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 GFRA4Q9GZZ7 299 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 GSN-AS1Q9NRJ2 163 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 NAT8BQ9UHF3 227 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 X6R8D5 127 aa9.36□□□□□ -0.91
CBWD3-203ENST00000377344 A0A1W2PPQ1 181 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 SMIM27A0A1W2PRY6 76 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 CXCL1P09341 107 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 EMP1P54849 157 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 ZNF415Q09FC8 603 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 KCNIP4Q6PIL6 250 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 LYZL1Q6UWQ5 148 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 CBLN2Q8IUK8 224 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 TMEM263Q8WUH6 116 aaKnown RBP9.35□□□□□ -0.91
CBWD3-203ENST00000377344 C16orf74Q96GX8 76 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 OVOL2Q9BRP0 275 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 NBEAL2Q6ZNJ1 2754 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 SMIM9A6NGZ8 99 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 SNURFLB1AK76 121 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 SPINK4O60575 86 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 IGLC6P0CF74 106 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 RNASE3P12724 160 aaKnown RBP9.35□□□□□ -0.91
CBWD3-203ENST00000377344 RNASE8Q8TDE3 154 aaKnown RBP9.35□□□□□ -0.91
CBWD3-203ENST00000377344 TP53TG1Q9Y2A0 90 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 PHLDA3Q9Y5J5 127 aa9.35□□□□□ -0.91
CBWD3-203ENST00000377344 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
CBWD3-203ENST00000377344 NUP35Q8NFH5 326 aa9.34□□□□□ -0.91
CBWD3-203ENST00000377344 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
CBWD3-203ENST00000377344 CXorf65A6NEN9 183 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms