RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ETDBQ3ZM63 59 aa11.16□□□□□ -0.62
TNFRSF1B-201ENST00000376259 RNF5Q99942 180 aa11.16□□□□□ -0.62
TNFRSF1B-201ENST00000376259 IGKV2D-26A0A0A0MRZ7 120 aa11.16□□□□□ -0.62
TNFRSF1B-201ENST00000376259 ASIPP42127 132 aa11.16□□□□□ -0.62
TNFRSF1B-201ENST00000376259 KLRB1Q12918 225 aa11.16□□□□□ -0.62
TNFRSF1B-201ENST00000376259 MRGPRG-AS1Q2M3A8 158 aa11.16□□□□□ -0.62
TNFRSF1B-201ENST00000376259 FAM159AQ6UWV7 190 aa11.16□□□□□ -0.62
TNFRSF1B-201ENST00000376259 ATP5J2P56134 94 aa11.16□□□□□ -0.62
TNFRSF1B-201ENST00000376259 TRAV41A0A0B4J266 112 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 H3BUX3 64 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 PPBPP02775 128 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 RBX1P62877 108 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 OR9G4Q8NGQ1 327 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 C9orf118A6NHY6 69 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 NPIPB6E9PJ23 425 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 H3BMG7 143 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 LGALS9BQ3B8N2 356 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 LGALS9CQ6DKI2 356 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 IGHV3OR16-12A0A075B7B8 117 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 ZNF815PA8K554 130 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 OVOL3O00110 214 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 GNRH2O43555 120 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 CRYGBP07316 175 aa11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 SRSF1Q07955 248 aaKnown RBP eCLIP11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 RPL39LQ96EH5 51 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1B-201ENST00000376259 K7ENP7 123 aa11.14□□□□□ -0.63
TNFRSF1B-201ENST00000376259 SLC50A1Q9BRV3 221 aa11.14□□□□□ -0.63
TNFRSF1B-201ENST00000376259 CHTOPQ9Y3Y2 248 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1B-201ENST00000376259 TMEM95Q3KNT9 176 aa11.13□□□□□ -0.63
TNFRSF1B-201ENST00000376259 Q5PR19 223 aa11.13□□□□□ -0.63
TNFRSF1B-201ENST00000376259 C8orf31Q8N9H6 132 aa11.13□□□□□ -0.63
TNFRSF1B-201ENST00000376259 ACANP16112 2415 aa11.13□□□□□ -0.63
TNFRSF1B-201ENST00000376259 TRAV12-2A0A075B6T6 113 aa11.13□□□□□ -0.63
TNFRSF1B-201ENST00000376259 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
TNFRSF1B-201ENST00000376259 TRBV12-3P01733 135 aa11.13□□□□□ -0.63
TNFRSF1B-201ENST00000376259 SH2D6Q7Z4S9 175 aa11.13□□□□□ -0.63
TNFRSF1B-201ENST00000376259 NPFFO15130 113 aa11.13□□□□□ -0.63
TNFRSF1B-201ENST00000376259 ADAMTSL5Q6ZMM2 481 aa11.13□□□□□ -0.63
TNFRSF1B-201ENST00000376259 TRBV25-1A0A075B6N4 114 aa11.12□□□□□ -0.63
TNFRSF1B-201ENST00000376259 M0R1W7 72 aa11.12□□□□□ -0.63
TNFRSF1B-201ENST00000376259 C2orf91Q6ZV80 131 aa11.12□□□□□ -0.63
TNFRSF1B-201ENST00000376259 Q8N9W7 124 aa11.12□□□□□ -0.63
TNFRSF1B-201ENST00000376259 WI2-2373I1.2A0A1W2PRP0 233 aa11.12□□□□□ -0.63
TNFRSF1B-201ENST00000376259 CSTL1Q9H114 145 aa11.12□□□□□ -0.63
TNFRSF1B-201ENST00000376259 BUB3O43684 328 aa11.12□□□□□ -0.63
TNFRSF1B-201ENST00000376259 RAB9AP51151 201 aa11.12□□□□□ -0.63
TNFRSF1B-201ENST00000376259 ANXA2RQ3ZCQ2 193 aa11.12□□□□□ -0.63
TNFRSF1B-201ENST00000376259 C11orf44Q8N8P7 122 aa11.12□□□□□ -0.63
TNFRSF1B-201ENST00000376259 H3BRM9 83 aa11.11□□□□□ -0.63
TNFRSF1B-201ENST00000376259 HOXB4P17483 251 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF1B-201ENST00000376259 NPC2P61916 151 aa11.11□□□□□ -0.63
TNFRSF1B-201ENST00000376259 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
TNFRSF1B-201ENST00000376259 A0A1W2PPM0 123 aa11.11□□□□□ -0.63
TNFRSF1B-201ENST00000376259 A0A0U1RRA0 63 aa11.11□□□□□ -0.63
TNFRSF1B-201ENST00000376259 CDKN1BP46527 198 aa11.11□□□□□ -0.63
TNFRSF1B-201ENST00000376259 PSMG4Q5JS54 123 aa11.11□□□□□ -0.63
TNFRSF1B-201ENST00000376259 KLHL30-AS1Q8NEE0 82 aa11.11□□□□□ -0.63
TNFRSF1B-201ENST00000376259 OR11H6Q8NGC7 330 aa11.11□□□□□ -0.63
TNFRSF1B-201ENST00000376259 TEX48A0A1B0GUV7 120 aa11.1□□□□□ -0.63
TNFRSF1B-201ENST00000376259 DPF1Q92782 380 aa11.1□□□□□ -0.63
TNFRSF1B-201ENST00000376259 BLCAPP62952 87 aa11.1□□□□□ -0.63
TNFRSF1B-201ENST00000376259 UNQ9165/PRO28630Q6UXU0 137 aa11.1□□□□□ -0.63
TNFRSF1B-201ENST00000376259 KIR2DL4Q99706 377 aa11.1□□□□□ -0.63
TNFRSF1B-201ENST00000376259 RHPN1-AS1Q9BWJ2 59 aa11.1□□□□□ -0.63
TNFRSF1B-201ENST00000376259 NPFFR1Q9GZQ6 430 aa11.1□□□□□ -0.63
TNFRSF1B-201ENST00000376259 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1B-201ENST00000376259 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
TNFRSF1B-201ENST00000376259 CLEC2AQ6UVW9 174 aa11.1□□□□□ -0.63
TNFRSF1B-201ENST00000376259 JPT2Q9H910 190 aa11.1□□□□□ -0.63
TNFRSF1B-201ENST00000376259 SLC25A16P16260 332 aa11.09□□□□□ -0.63
TNFRSF1B-201ENST00000376259 C2orf66Q6UXQ4 117 aa11.09□□□□□ -0.63
TNFRSF1B-201ENST00000376259 PGPEP1Q9NXJ5 209 aa11.09□□□□□ -0.63
TNFRSF1B-201ENST00000376259 K7EP34 96 aa11.09□□□□□ -0.63
TNFRSF1B-201ENST00000376259 GNLYP22749 145 aa11.09□□□□□ -0.63
TNFRSF1B-201ENST00000376259 ADORA2A-AS1P86434 159 aa11.09□□□□□ -0.63
TNFRSF1B-201ENST00000376259 KNCNA6PVL3 124 aa11.08□□□□□ -0.63
TNFRSF1B-201ENST00000376259 CRXO43186 299 aaPredicted RBP11.08□□□□□ -0.63
TNFRSF1B-201ENST00000376259 HERVK_113P61574 105 aa11.08□□□□□ -0.63
TNFRSF1B-201ENST00000376259 FAM110DQ8TAY7 271 aaPredicted RBP11.08□□□□□ -0.63
TNFRSF1B-201ENST00000376259 C11orf21Q9P2W6 132 aa11.08□□□□□ -0.63
TNFRSF1B-201ENST00000376259 MSRB2Q9Y3D2 182 aa11.08□□□□□ -0.63
TNFRSF1B-201ENST00000376259 WFDC2Q14508 124 aa11.08□□□□□ -0.64
TNFRSF1B-201ENST00000376259 BOD1L2Q8IYS8 172 aa11.08□□□□□ -0.64
TNFRSF1B-201ENST00000376259 KLK9Q9UKQ9 250 aa11.08□□□□□ -0.64
TNFRSF1B-201ENST00000376259 A0A096LNJ9 63 aa11.08□□□□□ -0.64
TNFRSF1B-201ENST00000376259 SUMO2P61956 95 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1B-201ENST00000376259 MINOS1Q5TGZ0 78 aa11.08□□□□□ -0.64
TNFRSF1B-201ENST00000376259 MINOS1-NBL1R4GNA1 71 aa11.08□□□□□ -0.64
TNFRSF1B-201ENST00000376259 PAX2Q02962 417 aa11.07□□□□□ -0.64
TNFRSF1B-201ENST00000376259 ODF1Q14990 250 aa11.07□□□□□ -0.64
TNFRSF1B-201ENST00000376259 Q8N8P6 123 aa11.07□□□□□ -0.64
TNFRSF1B-201ENST00000376259 NRGNQ92686 78 aa11.07□□□□□ -0.64
TNFRSF1B-201ENST00000376259 SRSF8Q9BRL6 282 aaKnown RBP11.07□□□□□ -0.64
TNFRSF1B-201ENST00000376259 TNFRSF13BO14836 293 aaPredicted RBP11.07□□□□□ -0.64
TNFRSF1B-201ENST00000376259 HLA-DRB4P13762 266 aa11.07□□□□□ -0.64
TNFRSF1B-201ENST00000376259 SAMD13Q5VXD3 122 aa11.07□□□□□ -0.64
TNFRSF1B-201ENST00000376259 HLA-DRB4X5D2U9 266 aa11.07□□□□□ -0.64
TNFRSF1B-201ENST00000376259 RAX2Q96IS3 184 aa11.07□□□□□ -0.64
TNFRSF1B-201ENST00000376259 EPG5Q9HCE0 2579 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms