RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 SMIM27A0A1W2PRY6 76 aa7.68□□□□□ -1.18
PDPN-203ENST00000376061 TMEM189A5PLL7 270 aa7.68□□□□□ -1.18
PDPN-203ENST00000376061 A8MWL6 223 aa7.68□□□□□ -1.18
PDPN-203ENST00000376061 CRXO43186 299 aaPredicted RBP7.68□□□□□ -1.18
PDPN-203ENST00000376061 GZMBP10144 247 aa7.68□□□□□ -1.18
PDPN-203ENST00000376061 S100PP25815 95 aa7.68□□□□□ -1.18
PDPN-203ENST00000376061 ELOBQ15370 118 aa7.68□□□□□ -1.18
PDPN-203ENST00000376061 KCNIP4Q6PIL6 250 aa7.68□□□□□ -1.18
PDPN-203ENST00000376061 Q8N1Y9 231 aa7.68□□□□□ -1.18
PDPN-203ENST00000376061 GTSF1Q8WW33 167 aa7.68□□□□□ -1.18
PDPN-203ENST00000376061 IGKV3D-20A0A0C4DH25 116 aa7.67□□□□□ -1.18
PDPN-203ENST00000376061 ZNF324O75467 553 aaPredicted RBP7.67□□□□□ -1.18
PDPN-203ENST00000376061 ORM1P02763 201 aa7.67□□□□□ -1.18
PDPN-203ENST00000376061 RBMY1A1P0DJD3 496 aaKnown RBP7.67□□□□□ -1.18
PDPN-203ENST00000376061 RBMY1CP0DJD4 496 aa7.67□□□□□ -1.18
PDPN-203ENST00000376061 FAM3BP58499 235 aaPredicted RBP7.67□□□□□ -1.18
PDPN-203ENST00000376061 KRTAP10-11P60412 298 aa7.67□□□□□ -1.18
PDPN-203ENST00000376061 EGFEM1PQ0D2K5 195 aa7.67□□□□□ -1.18
PDPN-203ENST00000376061 RBMY1FQ15415 496 aaKnown RBP7.67□□□□□ -1.18
PDPN-203ENST00000376061 ZNF575Q86XF7 245 aa7.67□□□□□ -1.18
PDPN-203ENST00000376061 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.67□□□□□ -1.18
PDPN-203ENST00000376061 NEU1Q99519 415 aa7.67□□□□□ -1.18
PDPN-203ENST00000376061 NAGKQ9UJ70 344 aa7.67□□□□□ -1.18
PDPN-203ENST00000376061 TGIF2-C20orf24A0A0A6YYL0 155 aa7.66□□□□□ -1.18
PDPN-203ENST00000376061 A0A1W2PPQ1 181 aa7.66□□□□□ -1.18
PDPN-203ENST00000376061 COLCA2A8K830 154 aa7.66□□□□□ -1.18
PDPN-203ENST00000376061 HIGD1CA8MV81 97 aa7.66□□□□□ -1.18
PDPN-203ENST00000376061 G3V4G9 280 aa7.66□□□□□ -1.18
PDPN-203ENST00000376061 AMBPP02760 352 aa7.66□□□□□ -1.18
PDPN-203ENST00000376061 CXCL1P09341 107 aa7.66□□□□□ -1.18
PDPN-203ENST00000376061 RPL35AP18077 110 aaKnown RBP7.66□□□□□ -1.18
PDPN-203ENST00000376061 RPS20P60866 119 aaKnown RBP7.66□□□□□ -1.18
PDPN-203ENST00000376061 MUC21Q5SSG8 566 aa7.66□□□□□ -1.18
PDPN-203ENST00000376061 GFRA4Q9GZZ7 299 aa7.66□□□□□ -1.18
PDPN-203ENST00000376061 SRD5A3Q9H8P0 318 aa7.66□□□□□ -1.18
PDPN-203ENST00000376061 TRBV24-1A0A075B6N3 115 aa7.65□□□□□ -1.18
PDPN-203ENST00000376061 TRAV9-1A0A075B6T8 112 aa7.65□□□□□ -1.18
PDPN-203ENST00000376061 XKRY2A2RUG3 117 aa7.65□□□□□ -1.18
PDPN-203ENST00000376061 FAM231BA6NCW3 169 aa7.65□□□□□ -1.18
PDPN-203ENST00000376061 INSP01308 110 aa7.65□□□□□ -1.18
PDPN-203ENST00000376061 GIG44P09565 113 aaPredicted RBP7.65□□□□□ -1.18
PDPN-203ENST00000376061 ANXA2RQ3ZCQ2 193 aa7.65□□□□□ -1.18
PDPN-203ENST00000376061 SAMD5Q5TGI4 173 aa7.65□□□□□ -1.18
PDPN-203ENST00000376061 NUP35Q8NFH5 326 aa7.65□□□□□ -1.18
PDPN-203ENST00000376061 PYGO2Q9BRQ0 406 aa7.65□□□□□ -1.18
PDPN-203ENST00000376061 XCL2Q9UBD3 114 aa7.65□□□□□ -1.18
PDPN-203ENST00000376061 NAT8BQ9UHF3 227 aa7.65□□□□□ -1.18
PDPN-203ENST00000376061 GRIFINA4D1Z8 144 aa7.64□□□□□ -1.19
PDPN-203ENST00000376061 IGLC6P0CF74 106 aa7.64□□□□□ -1.19
PDPN-203ENST00000376061 BTF3P20290 206 aaKnown RBP7.64□□□□□ -1.19
PDPN-203ENST00000376061 CTRLP40313 264 aa7.64□□□□□ -1.19
PDPN-203ENST00000376061 NUTF2P61970 127 aaKnown RBP7.64□□□□□ -1.19
PDPN-203ENST00000376061 MORN3Q6PF18 240 aaPredicted RBP7.64□□□□□ -1.19
PDPN-203ENST00000376061 BTF3L4Q96K17 158 aa7.64□□□□□ -1.19
PDPN-203ENST00000376061 PGLYRP4Q96LB8 373 aa7.64□□□□□ -1.19
PDPN-203ENST00000376061 IGHV1OR15-1A0A075B7D0 117 aa7.63□□□□□ -1.19
PDPN-203ENST00000376061 SPINK4O60575 86 aa7.63□□□□□ -1.19
PDPN-203ENST00000376061 TYMSP04818 313 aa7.63□□□□□ -1.19
PDPN-203ENST00000376061 FOXA3P55318 350 aaPredicted RBP7.63□□□□□ -1.19
PDPN-203ENST00000376061 TDRG1Q3Y452 100 aa7.63□□□□□ -1.19
PDPN-203ENST00000376061 LCE3BQ5TA77 95 aa7.63□□□□□ -1.19
PDPN-203ENST00000376061 FAM159AQ6UWV7 190 aa7.63□□□□□ -1.19
PDPN-203ENST00000376061 FER1L6-AS1Q8NA97 138 aa7.63□□□□□ -1.19
PDPN-203ENST00000376061 FAM210BQ96KR6 192 aa7.63□□□□□ -1.19
PDPN-203ENST00000376061 C20orf144Q9BQM9 153 aa7.63□□□□□ -1.19
PDPN-203ENST00000376061 NOTCH1P46531 2555 aa7.63□□□□□ -1.19
PDPN-203ENST00000376061 H3BVH4 76 aa7.62□□□□□ -1.19
PDPN-203ENST00000376061 RAB5AP20339 215 aa7.62□□□□□ -1.19
PDPN-203ENST00000376061 ASIPP42127 132 aa7.62□□□□□ -1.19
PDPN-203ENST00000376061 KRTAP21-3Q3LHN1 58 aa7.62□□□□□ -1.19
PDPN-203ENST00000376061 MRPL54Q6P161 138 aaKnown RBP7.62□□□□□ -1.19
PDPN-203ENST00000376061 C1orf158Q8N1D5 194 aa7.62□□□□□ -1.19
PDPN-203ENST00000376061 KCNS1Q96KK3 526 aa7.62□□□□□ -1.19
PDPN-203ENST00000376061 TPPP3Q9BW30 176 aa7.62□□□□□ -1.19
PDPN-203ENST00000376061 ZMAT5Q9UDW3 170 aaKnown RBP7.62□□□□□ -1.19
PDPN-203ENST00000376061 TP53TG3Q9ULZ0 132 aa7.62□□□□□ -1.19
PDPN-203ENST00000376061 NBEAL1Q6ZS30 2694 aa7.62□□□□□ -1.19
PDPN-203ENST00000376061 MGAM2Q2M2H8 2515 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 LOC102724200A0A096LPH7 203 aaPredicted RBP7.61□□□□□ -1.19
PDPN-203ENST00000376061 A0A1B0GXF2 115 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 GNRH2O43555 120 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 ARMS2P0C7Q2 107 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 FRMD6-AS1P0C7T7 363 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 IGHV4-30-4P0DP06 118 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 DNLZQ5SXM8 178 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 LYZL1Q6UWQ5 148 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 ATP5L2Q7Z4Y8 100 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 TMEM256Q8N2U0 113 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 LINC00467Q9BRT7 94 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 C1QTNF4Q9BXJ3 329 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 DNAH3Q8TD57 4116 aa7.61□□□□□ -1.19
PDPN-203ENST00000376061 IGHV3-16A0A0C4DH30 117 aa7.6□□□□□ -1.19
PDPN-203ENST00000376061 MUC21A0A0G2JKD1 596 aa7.6□□□□□ -1.19
PDPN-203ENST00000376061 MUC21A0A140T8X8 626 aa7.6□□□□□ -1.19
PDPN-203ENST00000376061 A0A1B0GUT8 65 aa7.6□□□□□ -1.19
PDPN-203ENST00000376061 SNAI2O43623 268 aa7.6□□□□□ -1.19
PDPN-203ENST00000376061 OR5AL1P0C617 328 aa7.6□□□□□ -1.19
PDPN-203ENST00000376061 MED14OSP0DP75 135 aa7.6□□□□□ -1.19
PDPN-203ENST00000376061 RNASE3P12724 160 aaKnown RBP7.6□□□□□ -1.19
PDPN-203ENST00000376061 CSNK1G2-AS1Q8NCQ2 148 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms