RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 KTN1-AS1Q86SY8 53 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 EXOC3-AS1Q8N2X6 119 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 ATAD5Q96QE3 1844 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 BCORL1Q5H9F3 1711 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 MRPL14Q6P1L8 145 aaKnown RBP4.78□□□□□ -1.64
SCN2A-202ENST00000375427 RNF5Q99942 180 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 S4R3C0 116 aa4.78□□□□□ -1.64
SCN2A-202ENST00000375427 COL1A1P02452 1464 aaPredicted RBP4.77□□□□□ -1.65
SCN2A-202ENST00000375427 IGHV3OR16-8A0A075B7F1 116 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 LOC107984640A0A0U1RRK4 108 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 PATE4P0C8F1 98 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 APOC4P55056 127 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 LINC00269Q8N2A0 174 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 DEFB104AQ8WTQ1 72 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 FIZ1Q96SL8 496 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 GFI1Q99684 422 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 BTAF1O14981 1849 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 XRN1Q8IZH2 1706 aaKnown RBP4.77□□□□□ -1.65
SCN2A-202ENST00000375427 PRR31Q5SQ13 230 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 E9PQ18 207 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 EIF4EBP3O60516 100 aaPredicted RBP4.77□□□□□ -1.65
SCN2A-202ENST00000375427 C1orf210Q8IVY1 113 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 RTBDNQ9BSG5 229 aaPredicted RBP4.77□□□□□ -1.65
SCN2A-202ENST00000375427 TAF1LQ8IZX4 1826 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 ZNF726P1Q15940 193 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 SP7Q8TDD2 431 aaPredicted RBP4.77□□□□□ -1.65
SCN2A-202ENST00000375427 RPP25Q9BUL9 199 aaKnown RBP4.77□□□□□ -1.65
SCN2A-202ENST00000375427 C16orf54Q6UWD8 224 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 DEPPQ9NTK1 212 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 X6R8D5 127 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 RBAKDNA6NC62 111 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 FAM27BQ5VT28 67 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 Q6ZWC4 215 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 C1orf158Q8N1D5 194 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 RNASE6Q93091 150 aaKnown RBP4.77□□□□□ -1.65
SCN2A-202ENST00000375427 Q96M66 194 aa4.77□□□□□ -1.65
SCN2A-202ENST00000375427 J3QLI3 93 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 LYPD3O95274 346 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 ACYP2P14621 99 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 TMEM223A0PJW6 202 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 DAZ2Q13117 558 aaKnown RBP4.76□□□□□ -1.65
SCN2A-202ENST00000375427 KLF16Q9BXK1 252 aaPredicted RBP4.76□□□□□ -1.65
SCN2A-202ENST00000375427 FGF23Q9GZV9 251 aaPredicted RBP4.76□□□□□ -1.65
SCN2A-202ENST00000375427 CACNA1AO00555 2505 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 TRAV7A0A075B6U4 112 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.76□□□□□ -1.65
SCN2A-202ENST00000375427 RPL39P5Q59GN2 51 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 NEU4Q8WWR8 484 aaPredicted RBP4.76□□□□□ -1.65
SCN2A-202ENST00000375427 hDV103S1A0JD37 113 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 TMEM14BQ9NUH8 114 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 TLN2Q9Y4G6 2542 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 IGHV3-11P01762 117 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 COX7BP24311 80 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 CFAP126Q5VTH2 177 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 PIK3C2AO00443 1686 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 MST1P26927 711 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 UBE2D3P61077 147 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 IL25Q9H293 177 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 TMEM213A2RRL7 107 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 LRCOL1A6NCL2 159 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 CD164Q04900 197 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 FXYD5Q96DB9 178 aa4.76□□□□□ -1.65
SCN2A-202ENST00000375427 UBR2Q8IWV8 1755 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 MBD3L4A6NDZ8 208 aaPredicted RBP4.75□□□□□ -1.65
SCN2A-202ENST00000375427 MBD3L3A6NE82 208 aaPredicted RBP4.75□□□□□ -1.65
SCN2A-202ENST00000375427 MBD3L5A6NJ08 208 aaPredicted RBP4.75□□□□□ -1.65
SCN2A-202ENST00000375427 CRYBA2P53672 197 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 NRGNQ92686 78 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 RGPD1P0DJD0 1748 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 LST1O00453 97 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 TIAF1O95411 115 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 ITLN1Q8WWA0 313 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 HIGD1BQ9P298 99 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 ADGRB2O60241 1585 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 GPHB5Q86YW7 130 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 USMG5Q96IX5 58 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 ERC2-IT1O76042 136 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 FAM182BQ5T319 152 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 GGNQ86UU5 652 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 WBP1Q96G27 269 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 RGPD2P0DJD1 1756 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 IGHV1-69DA0A0B4J2H0 117 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 IGHV1-58A0A0C4DH39 117 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 SSBP3-AS1Q7Z2R9 100 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 MED1Q15648 1581 aaPredicted RBP4.75□□□□□ -1.65
SCN2A-202ENST00000375427 XIRP1Q702N8 1843 aaKnown RBP4.75□□□□□ -1.65
SCN2A-202ENST00000375427 IGLV3-9A0A075B6K5 115 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 CTGFP29279 349 aa4.75□□□□□ -1.65
SCN2A-202ENST00000375427 SRSF3P84103 164 aaKnown RBP4.75□□□□□ -1.65
SCN2A-202ENST00000375427 DIP2BQ9P265 1576 aa4.74□□□□□ -1.65
SCN2A-202ENST00000375427 TLN1Q9Y490 2541 aaKnown RBP4.74□□□□□ -1.65
SCN2A-202ENST00000375427 IGLV3-16A0A075B6K0 115 aa4.74□□□□□ -1.65
SCN2A-202ENST00000375427 IGKV1-9A0A0C4DH69 117 aa4.74□□□□□ -1.65
SCN2A-202ENST00000375427 NUPR2A6NF83 97 aa4.74□□□□□ -1.65
SCN2A-202ENST00000375427 CCL4P13236 92 aa4.74□□□□□ -1.65
SCN2A-202ENST00000375427 GATA4P43694 442 aa4.74□□□□□ -1.65
SCN2A-202ENST00000375427 FOXF2Q12947 444 aa4.74□□□□□ -1.65
SCN2A-202ENST00000375427 CLPSL2Q6UWE3 100 aa4.74□□□□□ -1.65
SCN2A-202ENST00000375427 BCL9LQ86UU0 1499 aa4.74□□□□□ -1.65
SCN2A-202ENST00000375427 NDUFA1O15239 70 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms