RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 RPL19P84098 196 aaKnown RBP12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 ZNF575Q86XF7 245 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 KIR2DL5AQ8N109 375 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 KIR2DL5BQ8NHK3 375 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 LINC00467Q9BRT7 94 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 MGAM2Q2M2H8 2515 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 XKRY2A2RUG3 117 aa12.57□□□□□ -0.4
HLA-DMA-201ENST00000374843 ORM1P02763 201 aa12.57□□□□□ -0.4
HLA-DMA-201ENST00000374843 IGHV4-30-4P0DP06 118 aa12.57□□□□□ -0.4
HLA-DMA-201ENST00000374843 CBLN2Q8IUK8 224 aa12.57□□□□□ -0.4
HLA-DMA-201ENST00000374843 YPEL4Q96NS1 127 aa12.57□□□□□ -0.4
HLA-DMA-201ENST00000374843 NBEAL1Q6ZS30 2694 aa12.57□□□□□ -0.4
HLA-DMA-201ENST00000374843 ANXA2RQ3ZCQ2 193 aa12.56□□□□□ -0.4
HLA-DMA-201ENST00000374843 DNLZQ5SXM8 178 aa12.56□□□□□ -0.4
HLA-DMA-201ENST00000374843 TMEM88Q6PEY1 159 aa12.56□□□□□ -0.4
HLA-DMA-201ENST00000374843 TMEM256Q8N2U0 113 aa12.56□□□□□ -0.4
HLA-DMA-201ENST00000374843 CSNK1G2-AS1Q8NCQ2 148 aa12.56□□□□□ -0.4
HLA-DMA-201ENST00000374843 GTSF1Q8WW33 167 aa12.56□□□□□ -0.4
HLA-DMA-201ENST00000374843 NEU1Q99519 415 aa12.56□□□□□ -0.4
HLA-DMA-201ENST00000374843 PYGO2Q9BRQ0 406 aa12.56□□□□□ -0.4
HLA-DMA-201ENST00000374843 CSTL1Q9H114 145 aa12.56□□□□□ -0.4
HLA-DMA-201ENST00000374843 XCL2Q9UBD3 114 aa12.56□□□□□ -0.4
HLA-DMA-201ENST00000374843 TRAV9-1A0A075B6T8 112 aa12.55□□□□□ -0.4
HLA-DMA-201ENST00000374843 IGHV1OR15-1A0A075B7D0 117 aa12.55□□□□□ -0.4
HLA-DMA-201ENST00000374843 IGLC6P0CF74 106 aa12.55□□□□□ -0.4
HLA-DMA-201ENST00000374843 APOC4P55056 127 aa12.55□□□□□ -0.4
HLA-DMA-201ENST00000374843 FOXA3P55318 350 aaPredicted RBP12.55□□□□□ -0.4
HLA-DMA-201ENST00000374843 C1orf158Q8N1D5 194 aa12.55□□□□□ -0.4
HLA-DMA-201ENST00000374843 KCNS1Q96KK3 526 aa12.55□□□□□ -0.4
HLA-DMA-201ENST00000374843 NAGKQ9UJ70 344 aa12.55□□□□□ -0.4
HLA-DMA-201ENST00000374843 CTRLP40313 264 aa12.54□□□□□ -0.4
HLA-DMA-201ENST00000374843 MUC21Q5SSG8 566 aa12.54□□□□□ -0.4
HLA-DMA-201ENST00000374843 KCNIP4Q6PIL6 250 aa12.54□□□□□ -0.4
HLA-DMA-201ENST00000374843 FAM159AQ6UWV7 190 aa12.54□□□□□ -0.4
HLA-DMA-201ENST00000374843 TMSB15BA0A087X1C1 80 aa12.53□□□□□ -0.4
HLA-DMA-201ENST00000374843 TYMSP04818 313 aa12.53□□□□□ -0.4
HLA-DMA-201ENST00000374843 MED14OSP0DP75 135 aa12.53□□□□□ -0.4
HLA-DMA-201ENST00000374843 GZMBP10144 247 aa12.53□□□□□ -0.4
HLA-DMA-201ENST00000374843 S100PP25815 95 aa12.53□□□□□ -0.4
HLA-DMA-201ENST00000374843 NAT8BQ9UHF3 227 aa12.53□□□□□ -0.4
HLA-DMA-201ENST00000374843 GOLT1BQ9Y3E0 138 aa12.53□□□□□ -0.4
HLA-DMA-201ENST00000374843 NOTCH1P46531 2555 aa12.53□□□□□ -0.4
HLA-DMA-201ENST00000374843 A0A1W2PPQ1 181 aa12.52□□□□□ -0.41
HLA-DMA-201ENST00000374843 HIGD1CA8MV81 97 aa12.52□□□□□ -0.41
HLA-DMA-201ENST00000374843 UBE2CO00762 179 aa12.52□□□□□ -0.41
HLA-DMA-201ENST00000374843 TCL1AP56279 114 aa12.52□□□□□ -0.41
HLA-DMA-201ENST00000374843 ELOBQ15370 118 aa12.52□□□□□ -0.41
HLA-DMA-201ENST00000374843 ZNF705AQ6ZN79 300 aaPredicted RBP12.52□□□□□ -0.41
HLA-DMA-201ENST00000374843 NUP35Q8NFH5 326 aa12.52□□□□□ -0.41
HLA-DMA-201ENST00000374843 TRGV11A0A075B6L2 103 aa12.51□□□□□ -0.41
HLA-DMA-201ENST00000374843 TRBV24-1A0A075B6N3 115 aa12.51□□□□□ -0.41
HLA-DMA-201ENST00000374843 SNAI2O43623 268 aa12.51□□□□□ -0.41
HLA-DMA-201ENST00000374843 OR5AL1P0C617 328 aa12.51□□□□□ -0.41
HLA-DMA-201ENST00000374843 ASIPP42127 132 aa12.51□□□□□ -0.41
HLA-DMA-201ENST00000374843 FER1L6-AS1Q8NA97 138 aa12.51□□□□□ -0.41
HLA-DMA-201ENST00000374843 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
HLA-DMA-201ENST00000374843 CNFNQ9BYD5 112 aa12.51□□□□□ -0.41
HLA-DMA-201ENST00000374843 URGCP-MRPS24S4R325 110 aa12.51□□□□□ -0.41
HLA-DMA-201ENST00000374843 IGHV3-16A0A0C4DH30 117 aa12.5□□□□□ -0.41
HLA-DMA-201ENST00000374843 GRIFINA4D1Z8 144 aa12.5□□□□□ -0.41
HLA-DMA-201ENST00000374843 FAM3BP58499 235 aaPredicted RBP12.5□□□□□ -0.41
HLA-DMA-201ENST00000374843 BTF3L4Q96K17 158 aa12.5□□□□□ -0.41
HLA-DMA-201ENST00000374843 LINC01587Q99440 93 aa12.5□□□□□ -0.41
HLA-DMA-201ENST00000374843 SCRT2Q9NQ03 307 aa12.5□□□□□ -0.41
HLA-DMA-201ENST00000374843 TP53TG3Q9ULZ0 132 aa12.5□□□□□ -0.41
HLA-DMA-201ENST00000374843 RNASE3P12724 160 aaKnown RBP12.49□□□□□ -0.41
HLA-DMA-201ENST00000374843 C9orf85Q96MD7 179 aa12.49□□□□□ -0.41
HLA-DMA-201ENST00000374843 F2Z2F3 143 aa12.48□□□□□ -0.41
HLA-DMA-201ENST00000374843 H3BVH4 76 aa12.48□□□□□ -0.41
HLA-DMA-201ENST00000374843 K7EIL1 84 aa12.48□□□□□ -0.41
HLA-DMA-201ENST00000374843 GNRH2O43555 120 aa12.48□□□□□ -0.41
HLA-DMA-201ENST00000374843 NXPH4O95158 308 aa12.48□□□□□ -0.41
HLA-DMA-201ENST00000374843 ATP5L2Q7Z4Y8 100 aa12.48□□□□□ -0.41
HLA-DMA-201ENST00000374843 TMEM208Q9BTX3 173 aa12.48□□□□□ -0.41
HLA-DMA-201ENST00000374843 TGIF2-C20orf24A0A0A6YYL0 155 aa12.47□□□□□ -0.41
HLA-DMA-201ENST00000374843 A0A1B0GXF2 115 aa12.47□□□□□ -0.41
HLA-DMA-201ENST00000374843 CBY3A6NI87 242 aa12.47□□□□□ -0.41
HLA-DMA-201ENST00000374843 COLCA2A8K830 154 aa12.47□□□□□ -0.41
HLA-DMA-201ENST00000374843 FRMD6-AS1P0C7T7 363 aa12.47□□□□□ -0.41
HLA-DMA-201ENST00000374843 WDR73Q6P4I2 378 aa12.47□□□□□ -0.41
HLA-DMA-201ENST00000374843 LYZL1Q6UWQ5 148 aa12.47□□□□□ -0.41
HLA-DMA-201ENST00000374843 Q6ZWC4 215 aa12.47□□□□□ -0.41
HLA-DMA-201ENST00000374843 C11orf72Q8NBR9 251 aa12.47□□□□□ -0.41
HLA-DMA-201ENST00000374843 PGLYRP4Q96LB8 373 aa12.47□□□□□ -0.41
HLA-DMA-201ENST00000374843 IGHV4-4A0A075B6R2 117 aa12.46□□□□□ -0.41
HLA-DMA-201ENST00000374843 A0A1B0GUT8 65 aa12.46□□□□□ -0.41
HLA-DMA-201ENST00000374843 ARMS2P0C7Q2 107 aa12.46□□□□□ -0.41
HLA-DMA-201ENST00000374843 S100A4P26447 101 aaKnown RBP12.46□□□□□ -0.41
HLA-DMA-201ENST00000374843 ZNF415Q09FC8 603 aa12.46□□□□□ -0.41
HLA-DMA-201ENST00000374843 IL17DQ8TAD2 202 aa12.46□□□□□ -0.41
HLA-DMA-201ENST00000374843 RNASE8Q8TDE3 154 aaKnown RBP12.46□□□□□ -0.41
HLA-DMA-201ENST00000374843 CACNG7P62955 275 aa12.45□□□□□ -0.42
HLA-DMA-201ENST00000374843 RASL11AQ6T310 242 aa12.45□□□□□ -0.42
HLA-DMA-201ENST00000374843 TMEM263Q8WUH6 116 aaKnown RBP12.45□□□□□ -0.42
HLA-DMA-201ENST00000374843 FAM210BQ96KR6 192 aa12.45□□□□□ -0.42
HLA-DMA-201ENST00000374843 MDFICQ9P1T7 246 aa12.45□□□□□ -0.42
HLA-DMA-201ENST00000374843 IGHV3OR16-12A0A075B7B8 117 aa12.44□□□□□ -0.42
HLA-DMA-201ENST00000374843 A0A1B0GW15 77 aa12.44□□□□□ -0.42
HLA-DMA-201ENST00000374843 DEFB135Q30KP9 77 aa12.44□□□□□ -0.42
HLA-DMA-201ENST00000374843 ZNF493Q6ZR52 646 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms