RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CADP27708 2225 aa11.33□□□□□ -0.6
TRAF1-201ENST00000373887 IGHG2P01859 326 aa11.33□□□□□ -0.6
TRAF1-201ENST00000373887 BAALCQ8WXS3 180 aa11.33□□□□□ -0.6
TRAF1-201ENST00000373887 NOP10Q9NPE3 64 aaKnown RBP11.33□□□□□ -0.6
TRAF1-201ENST00000373887 ZC2HC1AQ96GY0 325 aa11.33□□□□□ -0.6
TRAF1-201ENST00000373887 IGHV4-61A0A0C4DH41 118 aa11.33□□□□□ -0.6
TRAF1-201ENST00000373887 TIMM17AQ99595 171 aa11.33□□□□□ -0.6
TRAF1-201ENST00000373887 BAALC-AS2P0C853 105 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 BOD1L2Q8IYS8 172 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 IGLV1-44P01699 117 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 LYL1P12980 280 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 ZNF833PQ6ZTB9 187 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 PRR25Q96S07 402 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 C1orf43Q9BWL3 253 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 YPEL3P61236 119 aaPredicted RBP11.32□□□□□ -0.6
TRAF1-201ENST00000373887 NDUFA4L2Q9NRX3 87 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 ORMDL1Q9P0S3 153 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 IGHV4-38-2P0DP08 117 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 ZNF134P52741 427 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 TMEM14BQ9NUH8 114 aa11.32□□□□□ -0.6
TRAF1-201ENST00000373887 IGHV2-5P01817 119 aa11.31□□□□□ -0.6
TRAF1-201ENST00000373887 LGALS9BQ3B8N2 356 aa11.31□□□□□ -0.6
TRAF1-201ENST00000373887 LGALS9CQ6DKI2 356 aa11.31□□□□□ -0.6
TRAF1-201ENST00000373887 KLF2Q9Y5W3 355 aaPredicted RBP11.31□□□□□ -0.6
TRAF1-201ENST00000373887 SPRY2O43597 315 aa11.31□□□□□ -0.6
TRAF1-201ENST00000373887 V9GYV3 84 aa11.31□□□□□ -0.6
TRAF1-201ENST00000373887 SMIM27A0A1W2PRY6 76 aa11.31□□□□□ -0.6
TRAF1-201ENST00000373887 H3BRN7 92 aa11.31□□□□□ -0.6
TRAF1-201ENST00000373887 HLA-DMBP28068 263 aa11.31□□□□□ -0.6
TRAF1-201ENST00000373887 ADORA2A-AS1P86434 159 aa11.31□□□□□ -0.6
TRAF1-201ENST00000373887 DOPEY2Q9Y3R5 2298 aa11.31□□□□□ -0.6
TRAF1-201ENST00000373887 ADAMTS9Q9P2N4 1935 aa11.3□□□□□ -0.6
TRAF1-201ENST00000373887 Q9H8V8 135 aa11.3□□□□□ -0.6
TRAF1-201ENST00000373887 PLXNA2O75051 1894 aa11.3□□□□□ -0.6
TRAF1-201ENST00000373887 ZMAT4Q9H898 229 aa11.3□□□□□ -0.6
TRAF1-201ENST00000373887 B5MCH6 92 aa11.3□□□□□ -0.6
TRAF1-201ENST00000373887 GNRH2O43555 120 aa11.3□□□□□ -0.6
TRAF1-201ENST00000373887 C12orf74Q32Q52 190 aa11.3□□□□□ -0.6
TRAF1-201ENST00000373887 C14orf132Q9NPU4 83 aa11.3□□□□□ -0.6
TRAF1-201ENST00000373887 F8VRH5 84 aa11.29□□□□□ -0.6
TRAF1-201ENST00000373887 NDUFA4O00483 81 aa11.29□□□□□ -0.6
TRAF1-201ENST00000373887 BUB3O43684 328 aa11.29□□□□□ -0.6
TRAF1-201ENST00000373887 ZNF726P1Q15940 193 aa11.29□□□□□ -0.6
TRAF1-201ENST00000373887 ZFHX2Q9C0A1 2572 aaPredicted RBP11.29□□□□□ -0.6
TRAF1-201ENST00000373887 A0A1W2PNU3 283 aaPredicted RBP11.29□□□□□ -0.6
TRAF1-201ENST00000373887 F6UB75 175 aa11.29□□□□□ -0.6
TRAF1-201ENST00000373887 SVIPQ8NHG7 77 aa11.29□□□□□ -0.6
TRAF1-201ENST00000373887 ETDCA0A1B0GVM5 59 aa11.29□□□□□ -0.6
TRAF1-201ENST00000373887 WIPF2Q8TF74 440 aaPredicted RBP11.29□□□□□ -0.6
TRAF1-201ENST00000373887 CTSZQ9UBR2 303 aa11.28□□□□□ -0.6
TRAF1-201ENST00000373887 C5orf38Q86SI9 138 aa11.28□□□□□ -0.6
TRAF1-201ENST00000373887 TRAV4A0A0B4J268 109 aa11.28□□□□□ -0.6
TRAF1-201ENST00000373887 NUP210Q8TEM1 1887 aaPredicted RBP11.28□□□□□ -0.6
TRAF1-201ENST00000373887 IGLV10-54A0A075B6I4 117 aa11.28□□□□□ -0.6
TRAF1-201ENST00000373887 IGKV3D-7A0A0C4DH55 119 aa11.28□□□□□ -0.6
TRAF1-201ENST00000373887 U3KQE9 123 aa11.28□□□□□ -0.6
TRAF1-201ENST00000373887 TEX48A0A1B0GUV7 120 aa11.27□□□□□ -0.6
TRAF1-201ENST00000373887 CCL25O15444 150 aa11.27□□□□□ -0.6
TRAF1-201ENST00000373887 C8orf31Q8N9H6 132 aa11.27□□□□□ -0.6
TRAF1-201ENST00000373887 MRPL53Q96EL3 112 aaKnown RBP11.27□□□□□ -0.6
TRAF1-201ENST00000373887 LMO1P25800 156 aa11.27□□□□□ -0.61
TRAF1-201ENST00000373887 VPREB3Q9UKI3 123 aa11.27□□□□□ -0.61
TRAF1-201ENST00000373887 ETV2O00321 342 aaPredicted RBP11.27□□□□□ -0.61
TRAF1-201ENST00000373887 Q6ZS49 121 aa11.27□□□□□ -0.61
TRAF1-201ENST00000373887 TIRAPP58753 221 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 Q6ZVH6 145 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 COX7B2Q8TF08 81 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 C17orf77Q96MU5 243 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 VOPP1Q96AW1 172 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 IGHV7-4-1A0A0J9YVY3 117 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 IGHV3-30P01768 117 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 IGHV3-33P01772 117 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 IGHV3-30-3P0DP02 117 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 IGHV3-30-5P0DP03 117 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 FOXE3Q13461 319 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 RSPO1Q2MKA7 263 aaPredicted RBP11.26□□□□□ -0.61
TRAF1-201ENST00000373887 IGHV2-70P01814 119 aa11.26□□□□□ -0.61
TRAF1-201ENST00000373887 CCL24O00175 119 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 SLURP1P55000 103 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 RHOHQ15669 191 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 CFC1BP0CG36 223 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 CFC1P0CG37 223 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 FUSP35637 526 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAF1-201ENST00000373887 DYNAPQ8N1N2 210 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 ZNF503Q96F45 646 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 WISP2O76076 250 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 WNK2Q9Y3S1 2297 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 ARFGEF3Q5TH69 2177 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 SLC25A29Q8N8R3 303 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 SPATA25Q9BR10 227 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 C15orf65H3BRN8 121 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 NCR3O14931 201 aa11.25□□□□□ -0.61
TRAF1-201ENST00000373887 K7EMI3 77 aa11.24□□□□□ -0.61
TRAF1-201ENST00000373887 CFPP27918 469 aa11.24□□□□□ -0.61
TRAF1-201ENST00000373887 SPANXDQ9BXN6 97 aa11.24□□□□□ -0.61
TRAF1-201ENST00000373887 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
TRAF1-201ENST00000373887 HIST2H2BCQ6DN03 193 aa11.24□□□□□ -0.61
TRAF1-201ENST00000373887 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
TRAF1-201ENST00000373887 PCNX1Q96RV3 2341 aa11.23□□□□□ -0.61
TRAF1-201ENST00000373887 COL4A3Q01955 1670 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms