RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 PTH2Q96A98 100 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 Q96MF0 132 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 AP1S3Q96PC3 154 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 JMJD8Q96S16 334 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 DPH3P1Q9H4G8 78 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 PHLDA3Q9Y5J5 127 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 IGHV4OR15-8A0A075B7B6 117 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 A0A087WW49 117 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 TMSB15BA0A087X1C1 80 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 TMEM213A2RRL7 107 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 ZNF207O43670 478 aaKnown RBP6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 TNFRSF6BO95407 300 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 PRB1P04280 392 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 HLA-DMBP28068 263 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 CDPF1Q6NVV7 123 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 ZNF575Q86XF7 245 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 KRTAP9-9Q9BYP9 154 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 KRTAP9-4Q9BYQ2 154 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 PRO1933Q9H354 126 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 PAM16Q9Y3D7 125 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 USP9XQ93008 2570 aaPredicted RBP6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 EPG5Q9HCE0 2579 aa6.58□□□□□ -1.36
SNRNP40-202ENST00000373720 ABCA2Q9BZC7 2435 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 IGHV3-66A0A0C4DH42 116 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 A0A0J9YX75 114 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 A8MTW9 85 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 SIVA1O15304 175 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 CD5LO43866 347 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 TRBV12-3P01733 135 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 SMIM17P0DL12 118 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 CDKN1BP46527 198 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 SAMD5Q5TGI4 173 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 OR2K2Q8NGT1 345 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 RNF185Q96GF1 192 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 LINC00467Q9BRT7 94 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 C16orf95Q9H693 158 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 USP24Q9UPU5 2620 aa6.57□□□□□ -1.36
SNRNP40-202ENST00000373720 DCHS2Q6V1P9 2916 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 RELNP78509 3460 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 TRGV11A0A075B6L2 103 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 IGHV3OR16-8A0A075B7F1 116 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 A1L4Q6 167 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 C7orf71A4D174 169 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 ADARB2-AS1A8MUL3 147 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 DLEU1O43261 78 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 RPLP1P05386 114 aaKnown RBP6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 HOXD3P31249 432 aaPredicted RBP6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 IFI27P40305 119 aaPredicted RBP6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 LAGE3Q14657 143 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 COL5A1-AS1Q5SY13 56 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 IGFL4Q6B9Z1 124 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 C12orf54Q6X4T0 127 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 C20orf173Q96LM9 149 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 FAM110AQ9BQ89 295 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 AKAP6Q13023 2319 aa6.56□□□□□ -1.36
SNRNP40-202ENST00000373720 TACC2O95359 2948 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 IGHV3OR16-13A0A075B7E8 117 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 IGHV3-49A0A0A0MS15 119 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 IGHV3-74A0A0B4J1X5 117 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 HLA-DRB4P13762 266 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 HNRNPA3P51991 378 aaKnown RBP6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 PAPPA-AS1Q5QFB9 102 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 SLC25A34Q6PIV7 304 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 Q6ZS46 218 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 BOD1L2Q8IYS8 172 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 OR9G4Q8NGQ1 327 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 NRGNQ92686 78 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 IFI27L1Q96BM0 104 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 SPAG8Q99932 426 aaPredicted RBP6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 EDA2RQ9HAV5 297 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 ZMAT5Q9UDW3 170 aaKnown RBP6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 HLA-DRB4X5D2U9 266 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 ZNF462Q96JM2 2506 aa6.55□□□□□ -1.36
SNRNP40-202ENST00000373720 SPTAN1Q13813 2472 aaKnown RBP6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 TRAV12-1A0A0B4J245 112 aa6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 H7C1H1 209 aa6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 NPYP01303 97 aa6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 CSN3P07498 182 aa6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 RNASE1P07998 156 aaKnown RBP6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 NPSP0C0P6 89 aa6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 PLA2G2AP14555 144 aa6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 Q6ZN92 141 aa6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 ZNF418Q8TF45 676 aaPredicted RBP6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 C11orf21Q9P2W6 132 aa6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 GOLT1BQ9Y3E0 138 aa6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 FLNCQ14315 2725 aa6.54□□□□□ -1.36
SNRNP40-202ENST00000373720 TRBV6-5A0A0K0K1A5 114 aa6.53□□□□□ -1.36
SNRNP40-202ENST00000373720 IGLL1P15814 213 aa6.53□□□□□ -1.36
SNRNP40-202ENST00000373720 RNASE4P34096 147 aaKnown RBP6.53□□□□□ -1.36
SNRNP40-202ENST00000373720 SYNJ2BPP57105 145 aa6.53□□□□□ -1.36
SNRNP40-202ENST00000373720 SUMO2P61956 95 aaKnown RBP6.53□□□□□ -1.36
SNRNP40-202ENST00000373720 ANXA2RQ3ZCQ2 193 aa6.53□□□□□ -1.36
SNRNP40-202ENST00000373720 TCTEX1D4Q5JR98 221 aa6.53□□□□□ -1.36
SNRNP40-202ENST00000373720 MDFIQ99750 246 aa6.53□□□□□ -1.36
SNRNP40-202ENST00000373720 SMIM2Q9BVW6 85 aa6.53□□□□□ -1.36
SNRNP40-202ENST00000373720 MED13LQ71F56 2210 aa6.53□□□□□ -1.36
SNRNP40-202ENST00000373720 IGLV2-18A0A075B6J9 118 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 IGHV1OR15-1A0A075B7D0 117 aa6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.52□□□□□ -1.37
SNRNP40-202ENST00000373720 H3BVH4 76 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms