RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 GFI1BQ5VTD9 330 aa13.4□□□□□ -0.26
CDX4-201ENST00000373514 ZNF705AQ6ZN79 300 aaPredicted RBP13.4□□□□□ -0.26
CDX4-201ENST00000373514 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.4□□□□□ -0.26
CDX4-201ENST00000373514 NUDT10Q8NFP7 164 aa13.4□□□□□ -0.26
CDX4-201ENST00000373514 NUDT11Q96G61 164 aa13.4□□□□□ -0.26
CDX4-201ENST00000373514 ODF3Q96PU9 254 aa13.4□□□□□ -0.26
CDX4-201ENST00000373514 V9GYV3 84 aa13.4□□□□□ -0.26
CDX4-201ENST00000373514 C19orf71A6NCJ1 209 aa13.39□□□□□ -0.27
CDX4-201ENST00000373514 AMBPP02760 352 aa13.39□□□□□ -0.27
CDX4-201ENST00000373514 LEPP41159 167 aa13.39□□□□□ -0.27
CDX4-201ENST00000373514 Q8NAQ8 132 aa13.39□□□□□ -0.27
CDX4-201ENST00000373514 IGHV4-28A0A0C4DH34 117 aa13.39□□□□□ -0.27
CDX4-201ENST00000373514 ZNF705GA8MUZ8 300 aaPredicted RBP13.39□□□□□ -0.27
CDX4-201ENST00000373514 GATCO43716 136 aaKnown RBP13.39□□□□□ -0.27
CDX4-201ENST00000373514 PRM2P04554 102 aa13.39□□□□□ -0.27
CDX4-201ENST00000373514 CRIP1P50238 77 aa13.39□□□□□ -0.27
CDX4-201ENST00000373514 SMUG1Q53HV7 270 aa13.39□□□□□ -0.27
CDX4-201ENST00000373514 DAZAP1Q96EP5 407 aaKnown RBP13.39□□□□□ -0.27
CDX4-201ENST00000373514 LENEPQ9Y5L5 61 aa13.39□□□□□ -0.27
CDX4-201ENST00000373514 URGCP-MRPS24S4R325 110 aa13.39□□□□□ -0.27
CDX4-201ENST00000373514 GOLT1BQ9Y3E0 138 aa13.38□□□□□ -0.27
CDX4-201ENST00000373514 KLLNB2CW77 178 aa13.37□□□□□ -0.27
CDX4-201ENST00000373514 P01737 135 aa13.37□□□□□ -0.27
CDX4-201ENST00000373514 TSPOP30536 169 aa13.37□□□□□ -0.27
CDX4-201ENST00000373514 ZNF80P51504 273 aaPredicted RBP13.37□□□□□ -0.27
CDX4-201ENST00000373514 Q6ZQT7 251 aa13.37□□□□□ -0.27
CDX4-201ENST00000373514 ZFAND2AQ8N6M9 145 aa13.37□□□□□ -0.27
CDX4-201ENST00000373514 YPEL4Q96NS1 127 aa13.37□□□□□ -0.27
CDX4-201ENST00000373514 TMEM208Q9BTX3 173 aa13.37□□□□□ -0.27
CDX4-201ENST00000373514 TRAV12-3A0A0B4J271 114 aa13.36□□□□□ -0.27
CDX4-201ENST00000373514 PFN1P07737 140 aaKnown RBP13.36□□□□□ -0.27
CDX4-201ENST00000373514 CRISP2P16562 243 aa13.36□□□□□ -0.27
CDX4-201ENST00000373514 ELOBQ15370 118 aa13.36□□□□□ -0.27
CDX4-201ENST00000373514 FAM162BQ5T6X4 162 aa13.36□□□□□ -0.27
CDX4-201ENST00000373514 IL36BQ9NZH7 164 aa13.36□□□□□ -0.27
CDX4-201ENST00000373514 C7orf71A4D174 169 aa13.35□□□□□ -0.27
CDX4-201ENST00000373514 SH2D1AO60880 128 aa13.35□□□□□ -0.27
CDX4-201ENST00000373514 S100PP25815 95 aa13.35□□□□□ -0.27
CDX4-201ENST00000373514 WWC2-AS2Q96NR7 200 aa13.35□□□□□ -0.27
CDX4-201ENST00000373514 IMMP2LQ96T52 175 aa13.35□□□□□ -0.27
CDX4-201ENST00000373514 RPP21Q9H633 154 aaKnown RBP13.35□□□□□ -0.27
CDX4-201ENST00000373514 TRBV7-9A0A0J9YWB2 115 aa13.34□□□□□ -0.27
CDX4-201ENST00000373514 COLCA2A8K830 154 aa13.34□□□□□ -0.27
CDX4-201ENST00000373514 GPX1P07203 203 aa13.34□□□□□ -0.27
CDX4-201ENST00000373514 MIFP14174 115 aa13.34□□□□□ -0.27
CDX4-201ENST00000373514 RNASE4P34096 147 aaKnown RBP13.34□□□□□ -0.27
CDX4-201ENST00000373514 C11orf68Q9H3H3 251 aaKnown RBP13.34□□□□□ -0.27
CDX4-201ENST00000373514 FAM3BP58499 235 aaPredicted RBP13.34□□□□□ -0.27
CDX4-201ENST00000373514 KCNIP4Q6PIL6 250 aa13.34□□□□□ -0.27
CDX4-201ENST00000373514 LINC01587Q99440 93 aa13.34□□□□□ -0.27
CDX4-201ENST00000373514 TGIF2-C20orf24A0A0A6YYL0 155 aa13.33□□□□□ -0.28
CDX4-201ENST00000373514 HTN1P15515 57 aa13.33□□□□□ -0.28
CDX4-201ENST00000373514 CT83Q5H943 113 aa13.33□□□□□ -0.28
CDX4-201ENST00000373514 NEU1Q99519 415 aa13.33□□□□□ -0.28
CDX4-201ENST00000373514 A0A1W2PPQ1 181 aa13.32□□□□□ -0.28
CDX4-201ENST00000373514 FABP5P3A8MUU1 101 aa13.32□□□□□ -0.28
CDX4-201ENST00000373514 CXCL1P09341 107 aa13.32□□□□□ -0.28
CDX4-201ENST00000373514 AZU1P20160 251 aa13.32□□□□□ -0.28
CDX4-201ENST00000373514 RPL19P84098 196 aaKnown RBP13.32□□□□□ -0.28
CDX4-201ENST00000373514 TMEM256Q8N2U0 113 aa13.32□□□□□ -0.28
CDX4-201ENST00000373514 OR2D3Q8NGH3 330 aa13.32□□□□□ -0.28
CDX4-201ENST00000373514 CELA1Q9UNI1 258 aa13.32□□□□□ -0.28
CDX4-201ENST00000373514 SMIM27A0A1W2PRY6 76 aa13.31□□□□□ -0.28
CDX4-201ENST00000373514 EMP1P54849 157 aa13.31□□□□□ -0.28
CDX4-201ENST00000373514 TCL1AP56279 114 aa13.31□□□□□ -0.28
CDX4-201ENST00000373514 RRN3P1Q2M238 152 aa13.31□□□□□ -0.28
CDX4-201ENST00000373514 TSKUQ8WUA8 353 aa13.31□□□□□ -0.28
CDX4-201ENST00000373514 C20orf144Q9BQM9 153 aa13.31□□□□□ -0.28
CDX4-201ENST00000373514 A8MWL6 223 aa13.3□□□□□ -0.28
CDX4-201ENST00000373514 ZNF324O75467 553 aaPredicted RBP13.3□□□□□ -0.28
CDX4-201ENST00000373514 IL17DQ8TAD2 202 aa13.3□□□□□ -0.28
CDX4-201ENST00000373514 DNAH7Q8WXX0 4024 aa13.3□□□□□ -0.28
CDX4-201ENST00000373514 TRBV24-1A0A075B6N3 115 aa13.29□□□□□ -0.28
CDX4-201ENST00000373514 TMEM189A5PLL7 270 aa13.29□□□□□ -0.28
CDX4-201ENST00000373514 SMIM9A6NGZ8 99 aa13.29□□□□□ -0.28
CDX4-201ENST00000373514 PYGO2Q9BRQ0 406 aa13.29□□□□□ -0.28
CDX4-201ENST00000373514 TMSB15BA0A087X1C1 80 aa13.29□□□□□ -0.28
CDX4-201ENST00000373514 GZMBP10144 247 aa13.29□□□□□ -0.28
CDX4-201ENST00000373514 FAM210BQ96KR6 192 aa13.29□□□□□ -0.28
CDX4-201ENST00000373514 TRAV21A0A0B4J279 112 aa13.28□□□□□ -0.28
CDX4-201ENST00000373514 PLAC8L1A1L4L8 177 aa13.28□□□□□ -0.28
CDX4-201ENST00000373514 ORM1P02763 201 aa13.28□□□□□ -0.28
CDX4-201ENST00000373514 Q6AWC8 147 aa13.28□□□□□ -0.28
CDX4-201ENST00000373514 C11orf21Q9P2W6 132 aa13.28□□□□□ -0.28
CDX4-201ENST00000373514 TRAV9-1A0A075B6T8 112 aa13.27□□□□□ -0.29
CDX4-201ENST00000373514 HIGD1CA8MV81 97 aa13.27□□□□□ -0.29
CDX4-201ENST00000373514 RAB5AP20339 215 aa13.27□□□□□ -0.29
CDX4-201ENST00000373514 NANOS2P60321 138 aaKnown RBP13.27□□□□□ -0.29
CDX4-201ENST00000373514 LINC01559Q495D7 138 aa13.27□□□□□ -0.29
CDX4-201ENST00000373514 MUC21Q5SSG8 566 aa13.27□□□□□ -0.29
CDX4-201ENST00000373514 NUP35Q8NFH5 326 aa13.27□□□□□ -0.29
CDX4-201ENST00000373514 GTSF1Q8WW33 167 aa13.27□□□□□ -0.29
CDX4-201ENST00000373514 GFRA4Q9GZZ7 299 aa13.27□□□□□ -0.29
CDX4-201ENST00000373514 NAT8BQ9UHF3 227 aa13.27□□□□□ -0.29
CDX4-201ENST00000373514 TP53TG3Q9ULZ0 132 aa13.27□□□□□ -0.29
CDX4-201ENST00000373514 RPS20P60866 119 aaKnown RBP13.26□□□□□ -0.29
CDX4-201ENST00000373514 ZFAND6Q6FIF0 208 aa13.26□□□□□ -0.29
CDX4-201ENST00000373514 MUC7Q8TAX7 377 aa13.26□□□□□ -0.29
CDX4-201ENST00000373514 RNASE8Q8TDE3 154 aaKnown RBP13.26□□□□□ -0.29
CDX4-201ENST00000373514 BTF3L4Q96K17 158 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms