RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 COX11Q9Y6N1 276 aa18.03■□□□□ 0.48
CDK9-201ENST00000373264 IGLV1-40P01703 118 aa18.03■□□□□ 0.48
CDK9-201ENST00000373264 LGALS9BQ3B8N2 356 aa18.02■□□□□ 0.48
CDK9-201ENST00000373264 LGALS9CQ6DKI2 356 aa18.02■□□□□ 0.48
CDK9-201ENST00000373264 USMG5Q96IX5 58 aa18.02■□□□□ 0.48
CDK9-201ENST00000373264 PPBPP02775 128 aa18.01■□□□□ 0.47
CDK9-201ENST00000373264 FGF6P10767 208 aa18.01■□□□□ 0.47
CDK9-201ENST00000373264 ATP6V0BQ99437 205 aa18.01■□□□□ 0.47
CDK9-201ENST00000373264 B4DSR2 109 aa18.01■□□□□ 0.47
CDK9-201ENST00000373264 CCL25O15444 150 aa18.01■□□□□ 0.47
CDK9-201ENST00000373264 DEFB112Q30KQ8 113 aa18.01■□□□□ 0.47
CDK9-201ENST00000373264 NRACQ8N912 160 aa18.01■□□□□ 0.47
CDK9-201ENST00000373264 OR2K2Q8NGT1 345 aa18.01■□□□□ 0.47
CDK9-201ENST00000373264 TMEM158Q8WZ71 300 aa18.01■□□□□ 0.47
CDK9-201ENST00000373264 M0R381 172 aa18■□□□□ 0.47
CDK9-201ENST00000373264 RNASE4P34096 147 aaKnown RBP18■□□□□ 0.47
CDK9-201ENST00000373264 IGLV2-18A0A075B6J9 118 aa18■□□□□ 0.47
CDK9-201ENST00000373264 OR10J6PQ8NGY7 276 aa18■□□□□ 0.47
CDK9-201ENST00000373264 CFHR3Q02985 330 aa17.99■□□□□ 0.47
CDK9-201ENST00000373264 SORL1Q92673 2214 aa17.99■□□□□ 0.47
CDK9-201ENST00000373264 GNRH2O43555 120 aa17.98■□□□□ 0.47
CDK9-201ENST00000373264 ANXA2RQ3ZCQ2 193 aa17.98■□□□□ 0.47
CDK9-201ENST00000373264 PPP1R14DQ9NXH3 145 aa17.98■□□□□ 0.47
CDK9-201ENST00000373264 A1L4Q6 167 aa17.98■□□□□ 0.47
CDK9-201ENST00000373264 FCER1GP30273 86 aa17.98■□□□□ 0.47
CDK9-201ENST00000373264 PCP2Q8IVA1 136 aa17.98■□□□□ 0.47
CDK9-201ENST00000373264 ORAOV1Q8WV07 137 aa17.98■□□□□ 0.47
CDK9-201ENST00000373264 TEX15Q9BXT5 2789 aa17.97■□□□□ 0.47
CDK9-201ENST00000373264 LINC01546A6NGU7 62 aa17.97■□□□□ 0.47
CDK9-201ENST00000373264 TAX1BP3O14907 124 aa17.97■□□□□ 0.47
CDK9-201ENST00000373264 TTTY13Q9BZ97 58 aa17.97■□□□□ 0.47
CDK9-201ENST00000373264 H3BUA1 57 aa17.96■□□□□ 0.47
CDK9-201ENST00000373264 LINC00477Q96M19 166 aa17.96■□□□□ 0.47
CDK9-201ENST00000373264 NXT2Q9NPJ8 142 aaKnown RBP17.96■□□□□ 0.47
CDK9-201ENST00000373264 DAZ1Q9NQZ3 744 aaKnown RBP17.96■□□□□ 0.47
CDK9-201ENST00000373264 ZNF469Q96JG9 3925 aaPredicted RBP17.96■□□□□ 0.46
CDK9-201ENST00000373264 CBY3A6NI87 242 aa17.95■□□□□ 0.46
CDK9-201ENST00000373264 CD5LO43866 347 aa17.95■□□□□ 0.46
CDK9-201ENST00000373264 NMUP48645 174 aa17.95■□□□□ 0.46
CDK9-201ENST00000373264 Q8N8P6 123 aa17.95■□□□□ 0.46
CDK9-201ENST00000373264 BBC3Q96PG8 261 aaPredicted RBP17.95■□□□□ 0.46
CDK9-201ENST00000373264 MUC4Q99102 2169 aa17.95■□□□□ 0.46
CDK9-201ENST00000373264 OVOL1O14753 267 aa17.94■□□□□ 0.46
CDK9-201ENST00000373264 C14orf178Q8N769 122 aaPredicted RBP17.94■□□□□ 0.46
CDK9-201ENST00000373264 AGRNO00468 2067 aa17.94■□□□□ 0.46
CDK9-201ENST00000373264 IGHV4-4A0A075B6R2 117 aa17.94■□□□□ 0.46
CDK9-201ENST00000373264 PRSS1P07477 247 aa17.94■□□□□ 0.46
CDK9-201ENST00000373264 PTTG1IPP53801 180 aa17.94■□□□□ 0.46
CDK9-201ENST00000373264 ODF1Q14990 250 aa17.94■□□□□ 0.46
CDK9-201ENST00000373264 SMIM15Q7Z3B0 74 aa17.94■□□□□ 0.46
CDK9-201ENST00000373264 PEF1Q9UBV8 284 aaKnown RBP17.94■□□□□ 0.46
CDK9-201ENST00000373264 SMPXQ9UHP9 88 aa17.94■□□□□ 0.46
CDK9-201ENST00000373264 IGKV2D-26A0A0A0MRZ7 120 aa17.93■□□□□ 0.46
CDK9-201ENST00000373264 BRI3O95415 125 aa17.93■□□□□ 0.46
CDK9-201ENST00000373264 A0A0G2JLM5 398 aa17.93■□□□□ 0.46
CDK9-201ENST00000373264 TGFAP01135 160 aa17.93■□□□□ 0.46
CDK9-201ENST00000373264 S100A4P26447 101 aaKnown RBP17.93■□□□□ 0.46
CDK9-201ENST00000373264 RPL39LQ96EH5 51 aaKnown RBP17.93■□□□□ 0.46
CDK9-201ENST00000373264 FAM19A4Q96LR4 140 aa17.93■□□□□ 0.46
CDK9-201ENST00000373264 FOXC2Q99958 501 aa17.93■□□□□ 0.46
CDK9-201ENST00000373264 TRAV21A0A0B4J279 112 aa17.92■□□□□ 0.46
CDK9-201ENST00000373264 SMIM17P0DL12 118 aa17.92■□□□□ 0.46
CDK9-201ENST00000373264 LENEPQ9Y5L5 61 aa17.92■□□□□ 0.46
CDK9-201ENST00000373264 A0A096LNT2 108 aa17.92■□□□□ 0.46
CDK9-201ENST00000373264 PSMB8P28062 276 aa17.92■□□□□ 0.46
CDK9-201ENST00000373264 C12orf54Q6X4T0 127 aa17.92■□□□□ 0.46
CDK9-201ENST00000373264 DEFB125Q8N687 156 aa17.92■□□□□ 0.46
CDK9-201ENST00000373264 DEFB104AQ8WTQ1 72 aa17.92■□□□□ 0.46
CDK9-201ENST00000373264 CREBBPQ92793 2442 aa17.91■□□□□ 0.46
CDK9-201ENST00000373264 UBR5O95071 2799 aaPredicted RBP17.91■□□□□ 0.46
CDK9-201ENST00000373264 BOD1L2Q8IYS8 172 aa17.91■□□□□ 0.46
CDK9-201ENST00000373264 NAV2Q8IVL1 2488 aa17.9■□□□□ 0.46
CDK9-201ENST00000373264 TLN2Q9Y4G6 2542 aa17.9■□□□□ 0.46
CDK9-201ENST00000373264 KRTAP10-9P60411 292 aa17.9■□□□□ 0.46
CDK9-201ENST00000373264 HHLA3Q9XRX5 114 aa17.9■□□□□ 0.46
CDK9-201ENST00000373264 C7orf71A4D174 169 aa17.9■□□□□ 0.46
CDK9-201ENST00000373264 RNASE3P12724 160 aaKnown RBP17.9■□□□□ 0.46
CDK9-201ENST00000373264 SRSF1Q07955 248 aaKnown RBP eCLIP17.89■□□□□ 0.45
CDK9-201ENST00000373264 DUX5Q96PT3 197 aa17.89■□□□□ 0.45
CDK9-201ENST00000373264 PHLDA3Q9Y5J5 127 aa17.89■□□□□ 0.45
CDK9-201ENST00000373264 IGKV3-20P01619 116 aa17.89■□□□□ 0.45
CDK9-201ENST00000373264 ASIPP42127 132 aa17.89■□□□□ 0.45
CDK9-201ENST00000373264 UBE2V1Q13404 147 aa17.89■□□□□ 0.45
CDK9-201ENST00000373264 LINC01356Q8N9X3 169 aa17.89■□□□□ 0.45
CDK9-201ENST00000373264 DCANP1Q8TF63 244 aa17.89■□□□□ 0.45
CDK9-201ENST00000373264 RASL10AQ92737 203 aa17.89■□□□□ 0.45
CDK9-201ENST00000373264 CUBNO60494 3623 aa17.88■□□□□ 0.45
CDK9-201ENST00000373264 RNF223E7ERA6 249 aa17.88■□□□□ 0.45
CDK9-201ENST00000373264 LAGE3Q14657 143 aa17.88■□□□□ 0.45
CDK9-201ENST00000373264 VAMP3Q15836 100 aa17.88■□□□□ 0.45
CDK9-201ENST00000373264 MGPP08493 103 aa17.88■□□□□ 0.45
CDK9-201ENST00000373264 TMEM97Q5BJF2 176 aa17.88■□□□□ 0.45
CDK9-201ENST00000373264 NBPF19A0A087WUL8 3843 aa17.87■□□□□ 0.45
CDK9-201ENST00000373264 OR1N2Q8NGR9 330 aa17.87■□□□□ 0.45
CDK9-201ENST00000373264 JPT2Q9H910 190 aa17.87■□□□□ 0.45
CDK9-201ENST00000373264 EPG5Q9HCE0 2579 aa17.87■□□□□ 0.45
CDK9-201ENST00000373264 ZNF688P0C7X2 276 aa17.87■□□□□ 0.45
CDK9-201ENST00000373264 GTSCR1Q86UQ5 136 aa17.87■□□□□ 0.45
CDK9-201ENST00000373264 DPF1Q92782 380 aa17.87■□□□□ 0.45
CDK9-201ENST00000373264 ZMAT4Q9H898 229 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms