RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 A0A0D9SG52 128 aa13.3□□□□□ -0.28
TRAPPC3-204ENST00000373166 KANTRA0A1W2PQU2 76 aa13.3□□□□□ -0.28
TRAPPC3-204ENST00000373166 SPINK4O60575 86 aa13.3□□□□□ -0.28
TRAPPC3-204ENST00000373166 HOXA5P20719 270 aa13.3□□□□□ -0.28
TRAPPC3-204ENST00000373166 CYB561D1Q8N8Q1 229 aa13.3□□□□□ -0.28
TRAPPC3-204ENST00000373166 OR11H4Q8NGC9 324 aa13.3□□□□□ -0.28
TRAPPC3-204ENST00000373166 C18orf15Q96N68 181 aa13.3□□□□□ -0.28
TRAPPC3-204ENST00000373166 EPDR1Q9UM22 224 aa13.3□□□□□ -0.28
TRAPPC3-204ENST00000373166 MAP1LC3B2A6NCE7 125 aa13.29□□□□□ -0.28
TRAPPC3-204ENST00000373166 EPM2AB3EWF7 344 aa13.29□□□□□ -0.28
TRAPPC3-204ENST00000373166 BCL2L11O43521 198 aa13.29□□□□□ -0.28
TRAPPC3-204ENST00000373166 FGF8P55075 233 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC3-204ENST00000373166 KRTAP10-2P60368 255 aa13.29□□□□□ -0.28
TRAPPC3-204ENST00000373166 TMEM183BQ1AE95 376 aa13.29□□□□□ -0.28
TRAPPC3-204ENST00000373166 TMEM183AQ8IXX5 376 aa13.29□□□□□ -0.28
TRAPPC3-204ENST00000373166 SGK494Q96LW2 274 aa13.29□□□□□ -0.28
TRAPPC3-204ENST00000373166 MAP1LC3BQ9GZQ8 125 aa13.29□□□□□ -0.28
TRAPPC3-204ENST00000373166 MRPL16Q9NX20 251 aaKnown RBP13.29□□□□□ -0.28
TRAPPC3-204ENST00000373166 A0A0J9YY99 117 aa13.28□□□□□ -0.28
TRAPPC3-204ENST00000373166 FBLL1A6NHQ2 334 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-204ENST00000373166 IFNA7P01567 189 aa13.28□□□□□ -0.28
TRAPPC3-204ENST00000373166 BTF3P20290 206 aaKnown RBP13.28□□□□□ -0.28
TRAPPC3-204ENST00000373166 UBE2G2P60604 165 aa13.28□□□□□ -0.28
TRAPPC3-204ENST00000373166 ZFP69Q49AA0 526 aa13.28□□□□□ -0.28
TRAPPC3-204ENST00000373166 TMEM75Q8N9X5 138 aa13.28□□□□□ -0.28
TRAPPC3-204ENST00000373166 TVP23CQ96ET8 276 aa13.28□□□□□ -0.28
TRAPPC3-204ENST00000373166 ZNF471Q9BX82 626 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC3-204ENST00000373166 PSG8Q9UQ74 426 aa13.28□□□□□ -0.28
TRAPPC3-204ENST00000373166 FLI1Q01543 452 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC3-204ENST00000373166 TDRG1Q3Y452 100 aa13.27□□□□□ -0.29
TRAPPC3-204ENST00000373166 STOML3Q8TAV4 291 aa13.27□□□□□ -0.29
TRAPPC3-204ENST00000373166 NKX6-2Q9C056 277 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC3-204ENST00000373166 H3BNG1 76 aa13.26□□□□□ -0.29
TRAPPC3-204ENST00000373166 PFDN1O60925 122 aa13.26□□□□□ -0.29
TRAPPC3-204ENST00000373166 SEC11BP0C7V7 166 aa13.26□□□□□ -0.29
TRAPPC3-204ENST00000373166 EIF5AP63241 154 aaKnown RBP13.26□□□□□ -0.29
TRAPPC3-204ENST00000373166 PRNTQ86SH4 94 aa13.26□□□□□ -0.29
TRAPPC3-204ENST00000373166 SPXQ9BT56 116 aa13.26□□□□□ -0.29
TRAPPC3-204ENST00000373166 KRTAP1-5Q9BYS1 174 aa13.26□□□□□ -0.29
TRAPPC3-204ENST00000373166 SDF2L1Q9HCN8 221 aa13.26□□□□□ -0.29
TRAPPC3-204ENST00000373166 MDFICQ9P1T7 246 aa13.26□□□□□ -0.29
TRAPPC3-204ENST00000373166 PPT1P50897 306 aa13.25□□□□□ -0.29
TRAPPC3-204ENST00000373166 KCNS1Q96KK3 526 aa13.25□□□□□ -0.29
TRAPPC3-204ENST00000373166 C8orf49Q96NF6 230 aa13.25□□□□□ -0.29
TRAPPC3-204ENST00000373166 A0A1W2PPQ1 181 aa13.24□□□□□ -0.29
TRAPPC3-204ENST00000373166 FAM74A7A6NL05 159 aa13.24□□□□□ -0.29
TRAPPC3-204ENST00000373166 UMAD1C9J7I0 102 aa13.24□□□□□ -0.29
TRAPPC3-204ENST00000373166 PEX7O00628 323 aa13.24□□□□□ -0.29
TRAPPC3-204ENST00000373166 IGLV2-11P01706 119 aa13.24□□□□□ -0.29
TRAPPC3-204ENST00000373166 SMUG1Q53HV7 270 aa13.24□□□□□ -0.29
TRAPPC3-204ENST00000373166 SAPCD1Q5SSQ6 148 aa13.24□□□□□ -0.29
TRAPPC3-204ENST00000373166 GCGP01275 180 aa13.23□□□□□ -0.29
TRAPPC3-204ENST00000373166 IGHV3-53P01767 116 aa13.23□□□□□ -0.29
TRAPPC3-204ENST00000373166 TYMSP04818 313 aa13.23□□□□□ -0.29
TRAPPC3-204ENST00000373166 INAFM2P0DMQ5 153 aa13.23□□□□□ -0.29
TRAPPC3-204ENST00000373166 FHITP49789 147 aa13.23□□□□□ -0.29
TRAPPC3-204ENST00000373166 TMUB2Q71RG4 321 aa13.23□□□□□ -0.29
TRAPPC3-204ENST00000373166 FAM213BQ8TBF2 198 aa13.23□□□□□ -0.29
TRAPPC3-204ENST00000373166 HIST1H2BAQ96A08 127 aa13.23□□□□□ -0.29
TRAPPC3-204ENST00000373166 UPK3BQ9BT76 320 aa13.23□□□□□ -0.29
TRAPPC3-204ENST00000373166 IGHV3-16A0A0C4DH30 117 aa13.22□□□□□ -0.29
TRAPPC3-204ENST00000373166 PFN1P07737 140 aaKnown RBP13.22□□□□□ -0.29
TRAPPC3-204ENST00000373166 DMBT1Q9UGM3 2413 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC3-204ENST00000373166 TRAV34A0A0B4J273 112 aa13.21□□□□□ -0.29
TRAPPC3-204ENST00000373166 GNRH2O43555 120 aa13.21□□□□□ -0.29
TRAPPC3-204ENST00000373166 TPT1P13693 172 aaKnown RBP13.21□□□□□ -0.29
TRAPPC3-204ENST00000373166 ZNF80P51504 273 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC3-204ENST00000373166 DPPA3Q6W0C5 159 aa13.21□□□□□ -0.29
TRAPPC3-204ENST00000373166 Q86TA4 180 aa13.21□□□□□ -0.29
TRAPPC3-204ENST00000373166 RASL10AQ92737 203 aa13.21□□□□□ -0.29
TRAPPC3-204ENST00000373166 TCEAL7Q9BRU2 100 aa13.21□□□□□ -0.29
TRAPPC3-204ENST00000373166 ARL2-SNX15V9GYD0 113 aa13.21□□□□□ -0.29
TRAPPC3-204ENST00000373166 M0R2P5 195 aa13.2□□□□□ -0.3
TRAPPC3-204ENST00000373166 PAX4O43316 350 aa13.2□□□□□ -0.3
TRAPPC3-204ENST00000373166 SLAQ13239 276 aa13.2□□□□□ -0.3
TRAPPC3-204ENST00000373166 ESRGQ1W209 222 aa13.2□□□□□ -0.3
TRAPPC3-204ENST00000373166 CST9LP1Q5W188 147 aa13.2□□□□□ -0.3
TRAPPC3-204ENST00000373166 TCTE3Q8IZS6 198 aa13.2□□□□□ -0.3
TRAPPC3-204ENST00000373166 SFT2D1Q8WV19 159 aa13.2□□□□□ -0.3
TRAPPC3-204ENST00000373166 VSIG2Q96IQ7 327 aa13.2□□□□□ -0.3
TRAPPC3-204ENST00000373166 LINC00479Q96M42 142 aa13.2□□□□□ -0.3
TRAPPC3-204ENST00000373166 PGPEP1Q9NXJ5 209 aa13.2□□□□□ -0.3
TRAPPC3-204ENST00000373166 PRO0255Q9UI72 69 aa13.2□□□□□ -0.3
TRAPPC3-204ENST00000373166 TRGV4A0A0C4DH28 118 aa13.19□□□□□ -0.3
TRAPPC3-204ENST00000373166 MRPS16Q9Y3D3 137 aaKnown RBP13.19□□□□□ -0.3
TRAPPC3-204ENST00000373166 ICOSQ9Y6W8 199 aa13.19□□□□□ -0.3
TRAPPC3-204ENST00000373166 UBE2G1P62253 170 aa13.18□□□□□ -0.3
TRAPPC3-204ENST00000373166 Q6ZNX1 250 aa13.18□□□□□ -0.3
TRAPPC3-204ENST00000373166 MBD3L1Q8WWY6 194 aa13.18□□□□□ -0.3
TRAPPC3-204ENST00000373166 FMC1Q96HJ9 113 aa13.18□□□□□ -0.3
TRAPPC3-204ENST00000373166 FAT1Q14517 4588 aa13.18□□□□□ -0.3
TRAPPC3-204ENST00000373166 A0A1B0GV50 99 aa13.17□□□□□ -0.3
TRAPPC3-204ENST00000373166 C11orf21Q9P2W6 132 aa13.17□□□□□ -0.3
TRAPPC3-204ENST00000373166 HHLA3Q9XRX5 114 aa13.17□□□□□ -0.3
TRAPPC3-204ENST00000373166 A0A096LPF7 62 aa13.16□□□□□ -0.3
TRAPPC3-204ENST00000373166 TRAV4A0A0B4J268 109 aa13.16□□□□□ -0.3
TRAPPC3-204ENST00000373166 PAGE4O60829 102 aa13.16□□□□□ -0.3
TRAPPC3-204ENST00000373166 H2AFB1P0C5Y9 115 aa13.16□□□□□ -0.3
TRAPPC3-204ENST00000373166 SFTA3P0C7M3 94 aa13.16□□□□□ -0.3
TRAPPC3-204ENST00000373166 CRYBA4P53673 196 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms