RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 F8VRH5 84 aa8.3□□□□□ -1.08
TRERF1-203ENST00000372917 B3GALT5-AS1P59052 145 aa8.3□□□□□ -1.08
TRERF1-203ENST00000372917 C2orf83Q53S99 150 aa8.3□□□□□ -1.08
TRERF1-203ENST00000372917 IGHV3-21A0A0B4J1V1 117 aa8.3□□□□□ -1.08
TRERF1-203ENST00000372917 IL17DQ8TAD2 202 aa8.3□□□□□ -1.08
TRERF1-203ENST00000372917 TPSG1Q9NRR2 321 aa8.3□□□□□ -1.08
TRERF1-203ENST00000372917 TTC28Q96AY4 2481 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 PSPNO60542 156 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 Q8N8P6 123 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 ZNRF1Q8ND25 227 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 CXXC4Q9H2H0 198 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 CTSZQ9UBR2 303 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 CD69Q07108 199 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 ATP5G1P05496 136 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 LINC01559Q495D7 138 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 ATP1A1-AS1Q5TC04 95 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 KLF14Q8TD94 323 aaPredicted RBP8.29□□□□□ -1.08
TRERF1-203ENST00000372917 BRK1Q8WUW1 75 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 METTL26Q96S19 204 aa8.29□□□□□ -1.08
TRERF1-203ENST00000372917 ATOX1O00244 68 aa8.28□□□□□ -1.08
TRERF1-203ENST00000372917 SPRY2O43597 315 aa8.28□□□□□ -1.08
TRERF1-203ENST00000372917 FAM201AQ5SY85 155 aa8.28□□□□□ -1.08
TRERF1-203ENST00000372917 C2orf48Q96LS8 159 aa8.28□□□□□ -1.08
TRERF1-203ENST00000372917 ZNF714Q96N38 554 aa8.28□□□□□ -1.08
TRERF1-203ENST00000372917 OTORQ9NRC9 128 aa8.28□□□□□ -1.08
TRERF1-203ENST00000372917 OVOL3O00110 214 aa8.27□□□□□ -1.08
TRERF1-203ENST00000372917 Q6ZT83 130 aa8.27□□□□□ -1.08
TRERF1-203ENST00000372917 MSRB1Q9NZV6 116 aa8.27□□□□□ -1.08
TRERF1-203ENST00000372917 M0R3E3 92 aa8.27□□□□□ -1.09
TRERF1-203ENST00000372917 Q6ZS46 218 aa8.27□□□□□ -1.09
TRERF1-203ENST00000372917 FOXA2Q9Y261 457 aaPredicted RBP8.27□□□□□ -1.09
TRERF1-203ENST00000372917 FAM240AA0A1B0GVK7 77 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 PROP1O75360 226 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 IGHV3-33P01772 117 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 SPANXDQ9BXN6 97 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 AGPAT4-IT1Q9H0P7 198 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 IGKV3D-15A0A087WSY6 115 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 LAGE3Q14657 143 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 PMS2CLQ68D20 193 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 C8orf49Q96NF6 230 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 LINC00643Q86TS7 51 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 SHANK2-AS3Q9BTD1 123 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 DPH3P1Q9H4G8 78 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 CREBBPQ92793 2442 aa8.26□□□□□ -1.09
TRERF1-203ENST00000372917 SUB1P53999 127 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRERF1-203ENST00000372917 CIRBPQ14011 172 aaKnown RBP8.25□□□□□ -1.09
TRERF1-203ENST00000372917 C9orf85Q96MD7 179 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 TMEM14BQ9NUH8 114 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 A0A0J9YY99 117 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 H7C423 109 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 LINC00311Q8N616 119 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 DYNLRB1Q9NP97 96 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 TRIOO75962 3097 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 TRAV8-3A0A0A6YYJ7 113 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 IGHV3-30P01768 117 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 IGHV3-30-5P0DP03 117 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 RHOHQ15669 191 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 SCNM1Q9BWG6 230 aa8.25□□□□□ -1.09
TRERF1-203ENST00000372917 ZNF503-AS2A6NEH8 195 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 PCNX2A6NKB5 2137 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 CRIP1P50238 77 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 CCL17Q92583 94 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 METRNQ9UJH8 293 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 IGHV3-72A0A0B4J1Y9 119 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 RNASE2P10153 161 aaKnown RBP8.24□□□□□ -1.09
TRERF1-203ENST00000372917 NBL1P41271 181 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 Q0VFX4 171 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 MDS2Q8NDY4 140 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 CCL13Q99616 98 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 PEMTQ9UBM1 199 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 MED13Q9UHV7 2174 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 NOTCH3Q9UM47 2321 aa8.24□□□□□ -1.09
TRERF1-203ENST00000372917 ZNF785A8K8V0 405 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 SYNJ2BPP57105 145 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 PRCDQ00LT1 54 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 PRORYQ9H606 182 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 RETNQ9HD89 108 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 P0DMU3 169 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 FAM231AP0DMU4 169 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 FAM231CP0DMU5 169 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 CCL8P80075 99 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 SMCR5Q8TEV8 140 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 PRR25Q96S07 402 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 CFAP54Q96N23 3096 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 IGLV2-11P01706 119 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 DEFB109BQ30KR1 87 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 HCP5Q6MZN7 132 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 CLEC2BQ92478 149 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 C16orf92Q96LL3 132 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 SPEGQ15772 3267 aa8.23□□□□□ -1.09
TRERF1-203ENST00000372917 NPC2P61916 151 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 COL6A6A6NMZ7 2263 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 A0A0G2JNJ9 132 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 TRIAP1O43715 76 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 SH2D1AO60880 128 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 COX6CP09669 75 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 TMEM105Q8N8V8 129 aa8.22□□□□□ -1.09
TRERF1-203ENST00000372917 Q9UFV3 132 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms