RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 NKX2-5P52952 324 aaPredicted RBP10.64□□□□□ -0.71
SS18L1-202ENST00000370848 TCL1AP56279 114 aa10.64□□□□□ -0.71
SS18L1-202ENST00000370848 DAZ2Q13117 558 aaKnown RBP10.64□□□□□ -0.71
SS18L1-202ENST00000370848 RNF212Q495C1 297 aa10.64□□□□□ -0.71
SS18L1-202ENST00000370848 ZFP69Q49AA0 526 aa10.64□□□□□ -0.71
SS18L1-202ENST00000370848 CST9LP1Q5W188 147 aa10.64□□□□□ -0.71
SS18L1-202ENST00000370848 DPPA3Q6W0C5 159 aa10.64□□□□□ -0.71
SS18L1-202ENST00000370848 MDFICQ9P1T7 246 aa10.64□□□□□ -0.71
SS18L1-202ENST00000370848 K7EQM0 130 aa10.63□□□□□ -0.71
SS18L1-202ENST00000370848 ATP5G1P05496 136 aa10.63□□□□□ -0.71
SS18L1-202ENST00000370848 CCL20P78556 96 aa10.63□□□□□ -0.71
SS18L1-202ENST00000370848 TMEM183BQ1AE95 376 aa10.63□□□□□ -0.71
SS18L1-202ENST00000370848 SLC51BQ86UW2 128 aa10.63□□□□□ -0.71
SS18L1-202ENST00000370848 TMEM183AQ8IXX5 376 aa10.63□□□□□ -0.71
SS18L1-202ENST00000370848 NDFIP1Q9BT67 221 aa10.63□□□□□ -0.71
SS18L1-202ENST00000370848 MRPL16Q9NX20 251 aaKnown RBP10.63□□□□□ -0.71
SS18L1-202ENST00000370848 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
SS18L1-202ENST00000370848 ARL2-SNX15V9GYD0 113 aa10.63□□□□□ -0.71
SS18L1-202ENST00000370848 TRGV1A0A0A0MS02 117 aa10.62□□□□□ -0.71
SS18L1-202ENST00000370848 TRAV21A0A0B4J279 112 aa10.62□□□□□ -0.71
SS18L1-202ENST00000370848 GNRH2O43555 120 aa10.62□□□□□ -0.71
SS18L1-202ENST00000370848 SPINK4O60575 86 aa10.62□□□□□ -0.71
SS18L1-202ENST00000370848 IBA57Q5T440 356 aaKnown RBP10.62□□□□□ -0.71
SS18L1-202ENST00000370848 Q86TA4 180 aa10.62□□□□□ -0.71
SS18L1-202ENST00000370848 NACAE9PAV3 2078 aa10.61□□□□□ -0.71
SS18L1-202ENST00000370848 PRSS29PA6NIE9 313 aa10.61□□□□□ -0.71
SS18L1-202ENST00000370848 GCGP01275 180 aa10.61□□□□□ -0.71
SS18L1-202ENST00000370848 HOXA5P20719 270 aa10.61□□□□□ -0.71
SS18L1-202ENST00000370848 SULT1A2P50226 295 aa10.61□□□□□ -0.71
SS18L1-202ENST00000370848 ZNF415Q09FC8 603 aa10.61□□□□□ -0.71
SS18L1-202ENST00000370848 FAM159AQ6UWV7 190 aa10.61□□□□□ -0.71
SS18L1-202ENST00000370848 NKX6-2Q9C056 277 aaPredicted RBP10.61□□□□□ -0.71
SS18L1-202ENST00000370848 HSPG2P98160 4391 aa10.61□□□□□ -0.71
SS18L1-202ENST00000370848 TYMSP04818 313 aa10.6□□□□□ -0.71
SS18L1-202ENST00000370848 FAM3BP58499 235 aaPredicted RBP10.6□□□□□ -0.71
SS18L1-202ENST00000370848 HIST1H2BAQ96A08 127 aa10.6□□□□□ -0.71
SS18L1-202ENST00000370848 BOLA1Q9Y3E2 137 aa10.6□□□□□ -0.71
SS18L1-202ENST00000370848 TRGV11A0A075B6L2 103 aa10.59□□□□□ -0.71
SS18L1-202ENST00000370848 TRGV2A0A075B6R0 118 aa10.59□□□□□ -0.71
SS18L1-202ENST00000370848 IGHV3-16A0A0C4DH30 117 aa10.59□□□□□ -0.71
SS18L1-202ENST00000370848 SCO2A0A1W2PP80 73 aa10.59□□□□□ -0.71
SS18L1-202ENST00000370848 PPT1P50897 306 aa10.59□□□□□ -0.71
SS18L1-202ENST00000370848 OR5I1Q13606 314 aa10.59□□□□□ -0.71
SS18L1-202ENST00000370848 TDRG1Q3Y452 100 aa10.59□□□□□ -0.71
SS18L1-202ENST00000370848 SMUG1Q53HV7 270 aa10.59□□□□□ -0.71
SS18L1-202ENST00000370848 EIF5AL1Q6IS14 154 aaKnown RBP10.59□□□□□ -0.71
SS18L1-202ENST00000370848 A0A0J9YY99 117 aa10.58□□□□□ -0.72
SS18L1-202ENST00000370848 FBLL1A6NHQ2 334 aaKnown RBP10.58□□□□□ -0.72
SS18L1-202ENST00000370848 IGHV3-53P01767 116 aa10.58□□□□□ -0.72
SS18L1-202ENST00000370848 PFN1P07737 140 aaKnown RBP10.58□□□□□ -0.72
SS18L1-202ENST00000370848 AKR1C3P42330 323 aa10.58□□□□□ -0.72
SS18L1-202ENST00000370848 RAB5CP51148 216 aa10.58□□□□□ -0.72
SS18L1-202ENST00000370848 SAPCD1Q5SSQ6 148 aa10.58□□□□□ -0.72
SS18L1-202ENST00000370848 C15orf53Q8NAA6 179 aa10.58□□□□□ -0.72
SS18L1-202ENST00000370848 GNG13Q9P2W3 67 aa10.58□□□□□ -0.72
SS18L1-202ENST00000370848 LRP1BQ9NZR2 4599 aa10.58□□□□□ -0.72
SS18L1-202ENST00000370848 TRAV1-1A0A0B4J248 108 aa10.57□□□□□ -0.72
SS18L1-202ENST00000370848 ALKAL2Q6UX46 152 aa10.57□□□□□ -0.72
SS18L1-202ENST00000370848 ZC2HC1AQ96GY0 325 aa10.57□□□□□ -0.72
SS18L1-202ENST00000370848 FMC1Q96HJ9 113 aa10.57□□□□□ -0.72
SS18L1-202ENST00000370848 SDF2L1Q9HCN8 221 aa10.57□□□□□ -0.72
SS18L1-202ENST00000370848 TRAV26-1A0A087WT03 109 aa10.56□□□□□ -0.72
SS18L1-202ENST00000370848 NUDT3O95989 172 aa10.56□□□□□ -0.72
SS18L1-202ENST00000370848 CRIP1P50238 77 aa10.56□□□□□ -0.72
SS18L1-202ENST00000370848 UBE2G1P62253 170 aa10.56□□□□□ -0.72
SS18L1-202ENST00000370848 NHLRC2Q8NBF2 726 aa10.56□□□□□ -0.72
SS18L1-202ENST00000370848 C18orf15Q96N68 181 aa10.56□□□□□ -0.72
SS18L1-202ENST00000370848 TCEAL7Q9BRU2 100 aa10.56□□□□□ -0.72
SS18L1-202ENST00000370848 MUC4Q99102 2169 aa10.55□□□□□ -0.72
SS18L1-202ENST00000370848 IGKV3D-20A0A0C4DH25 116 aa10.55□□□□□ -0.72
SS18L1-202ENST00000370848 M0R2N4 97 aa10.55□□□□□ -0.72
SS18L1-202ENST00000370848 LTAP01374 205 aa10.55□□□□□ -0.72
SS18L1-202ENST00000370848 TRBV6-1A0A0K0K1D8 114 aa10.54□□□□□ -0.72
SS18L1-202ENST00000370848 SH2D1AO60880 128 aa10.54□□□□□ -0.72
SS18L1-202ENST00000370848 SFTA3P0C7M3 94 aa10.54□□□□□ -0.72
SS18L1-202ENST00000370848 UBE2DNLQ8IWF7 75 aa10.54□□□□□ -0.72
SS18L1-202ENST00000370848 KCNS1Q96KK3 526 aa10.54□□□□□ -0.72
SS18L1-202ENST00000370848 SPXQ9BT56 116 aa10.54□□□□□ -0.72
SS18L1-202ENST00000370848 MANBALQ9NQG1 85 aa10.54□□□□□ -0.72
SS18L1-202ENST00000370848 SOHLH1Q5JUK2 328 aa10.53□□□□□ -0.72
SS18L1-202ENST00000370848 COX8CQ7Z4L0 72 aa10.53□□□□□ -0.72
SS18L1-202ENST00000370848 RASL10AQ92737 203 aa10.53□□□□□ -0.72
SS18L1-202ENST00000370848 VSIG2Q96IQ7 327 aa10.53□□□□□ -0.72
SS18L1-202ENST00000370848 ZNF479Q96JC4 524 aa10.53□□□□□ -0.72
SS18L1-202ENST00000370848 DERL1Q9BUN8 251 aa10.53□□□□□ -0.72
SS18L1-202ENST00000370848 ZFP30Q9Y2G7 519 aa10.53□□□□□ -0.72
SS18L1-202ENST00000370848 FABP5P3A8MUU1 101 aa10.52□□□□□ -0.73
SS18L1-202ENST00000370848 M0R036 132 aa10.52□□□□□ -0.73
SS18L1-202ENST00000370848 M0R2P5 195 aa10.52□□□□□ -0.73
SS18L1-202ENST00000370848 RNASE3P12724 160 aaKnown RBP10.52□□□□□ -0.73
SS18L1-202ENST00000370848 C9orf85Q96MD7 179 aa10.52□□□□□ -0.73
SS18L1-202ENST00000370848 APOBP04114 4563 aaKnown RBP10.51□□□□□ -0.73
SS18L1-202ENST00000370848 IGLV2-18A0A075B6J9 118 aa10.51□□□□□ -0.73
SS18L1-202ENST00000370848 C9JCJ5 164 aa10.51□□□□□ -0.73
SS18L1-202ENST00000370848 FHL2Q14192 279 aa10.51□□□□□ -0.73
SS18L1-202ENST00000370848 C1orf134Q5TEV5 83 aa10.51□□□□□ -0.73
SS18L1-202ENST00000370848 C11orf52Q96A22 123 aa10.51□□□□□ -0.73
SS18L1-202ENST00000370848 TMSB15BA0A087X1C1 80 aa10.5□□□□□ -0.73
SS18L1-202ENST00000370848 GRIFINA4D1Z8 144 aa10.5□□□□□ -0.73
SS18L1-202ENST00000370848 B4DEV8 164 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms