RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 WI2-2373I1.2A0A1W2PRP0 233 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 CD3EP07766 207 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 DPF1Q92782 380 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 HHLA3Q9XRX5 114 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 E9PLD3 99 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 FOXI1Q12951 378 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 ZFAND6Q6FIF0 208 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 Q8N8P6 123 aa8.11□□□□□ -1.11
PRPF38B-201ENST00000370021 MYO9AB2RTY4 2548 aa8.1□□□□□ -1.11
PRPF38B-201ENST00000370021 A0A087WWL8 130 aa8.1□□□□□ -1.11
PRPF38B-201ENST00000370021 ADARB2-AS1A8MUL3 147 aa8.1□□□□□ -1.11
PRPF38B-201ENST00000370021 TIMD4Q96H15 378 aa8.1□□□□□ -1.11
PRPF38B-201ENST00000370021 SMG1Q96Q15 3661 aaKnown RBP8.1□□□□□ -1.11
PRPF38B-201ENST00000370021 LGALS3P17931 250 aaKnown RBP8.1□□□□□ -1.11
PRPF38B-201ENST00000370021 C2orf66Q6UXQ4 117 aa8.1□□□□□ -1.11
PRPF38B-201ENST00000370021 SMPXQ9UHP9 88 aa8.1□□□□□ -1.11
PRPF38B-201ENST00000370021 GAGE2BQ13066 116 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 GAGE2EQ4V326 116 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 LYRM7Q5U5X0 104 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 LYPD1Q8N2G4 141 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 AGPAT4-IT1Q9H0P7 198 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 GAGE2DQ9UEU5 116 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 IGKV3D-20A0A0C4DH25 116 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 G3V318 75 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 GATA3P23771 443 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 CSMD1Q96PZ7 3565 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 A0A087WX48 190 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 MBD3L4A6NDZ8 208 aaPredicted RBP8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 MBD3L3A6NE82 208 aaPredicted RBP8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 MBD3L5A6NJ08 208 aaPredicted RBP8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 F8VRH5 84 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 PLNP26678 52 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 MBD3L2Q8NHZ7 208 aaPredicted RBP8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 PLEKHB2Q96CS7 222 aa8.09□□□□□ -1.11
PRPF38B-201ENST00000370021 METTL26Q96S19 204 aa8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 LRBAP50851 2863 aa8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 A0A0G2JNJ9 132 aa8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 FCN3O75636 299 aa8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 ZNF493Q6ZR52 646 aa8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 Q9UFV3 132 aa8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 TRAV12-3A0A0B4J271 114 aa8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 LINC01548A6NM66 108 aa8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 E7EQL1 145 aa8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 F6UB75 175 aa8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 C5orf64Q2M2E5 130 aa8.08□□□□□ -1.12
PRPF38B-201ENST00000370021 IGF1P05019 195 aa8.07□□□□□ -1.12
PRPF38B-201ENST00000370021 TMEM219Q86XT9 240 aa8.07□□□□□ -1.12
PRPF38B-201ENST00000370021 RNF185Q96GF1 192 aa8.07□□□□□ -1.12
PRPF38B-201ENST00000370021 LINC00477Q96M19 166 aa8.07□□□□□ -1.12
PRPF38B-201ENST00000370021 XGP55808 180 aa8.07□□□□□ -1.12
PRPF38B-201ENST00000370021 SUMO2P61956 95 aaKnown RBP8.07□□□□□ -1.12
PRPF38B-201ENST00000370021 ZNF48Q96MX3 618 aaPredicted RBP8.07□□□□□ -1.12
PRPF38B-201ENST00000370021 PTPRQQ9UMZ3 2332 aa8.07□□□□□ -1.12
PRPF38B-201ENST00000370021 TRPT1Q86TN4 253 aaKnown RBP8.06□□□□□ -1.12
PRPF38B-201ENST00000370021 SMIM20Q8N5G0 67 aa8.06□□□□□ -1.12
PRPF38B-201ENST00000370021 C1QTNF4Q9BXJ3 329 aa8.06□□□□□ -1.12
PRPF38B-201ENST00000370021 NCOR2Q9Y618 2525 aa8.06□□□□□ -1.12
PRPF38B-201ENST00000370021 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
PRPF38B-201ENST00000370021 ZZEF1O43149 2961 aa8.06□□□□□ -1.12
PRPF38B-201ENST00000370021 GNRH2O43555 120 aa8.06□□□□□ -1.12
PRPF38B-201ENST00000370021 LGALS1P09382 135 aaKnown RBP8.06□□□□□ -1.12
PRPF38B-201ENST00000370021 ZNF56Q15929 161 aa8.06□□□□□ -1.12
PRPF38B-201ENST00000370021 TM2D2Q9BX73 214 aa8.06□□□□□ -1.12
PRPF38B-201ENST00000370021 HIGD1BQ9P298 99 aa8.06□□□□□ -1.12
PRPF38B-201ENST00000370021 DUSP14O95147 198 aaKnown RBP8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 RPL39P62891 51 aaKnown RBP8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 PDE6HQ13956 83 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 LY6EQ16553 131 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 NTN5Q8WTR8 489 aaPredicted RBP8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 PPDPFLQ8WWR9 84 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 SMIM2Q9BVW6 85 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 TP53TG1Q9Y2A0 90 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 ASIPP42127 132 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 ORMDL2Q53FV1 153 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 Q6ZUT4 128 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 TLN2Q9Y4G6 2542 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 IGHV3-73A0A0B4J1V6 119 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 TCF15Q12870 199 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 PRR30Q53SZ7 412 aaPredicted RBP8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 C11orf21Q9P2W6 132 aa8.05□□□□□ -1.12
PRPF38B-201ENST00000370021 CTSGP08311 255 aa8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 ZNF672Q499Z4 452 aaPredicted RBP8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 LINC00311Q8N616 119 aa8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 ANKRD29Q8N6D5 301 aa8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 OPRPNQ99935 248 aaPredicted RBP8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 RAI1Q7Z5J4 1906 aaPredicted RBP8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 RNASE13Q5GAN3 156 aaKnown RBP8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 NFE4Q86UQ8 179 aa8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 OR11H6Q8NGC7 330 aa8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 ASH1LQ9NR48 2969 aaKnown RBP8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 INS-IGF2F8WCM5 200 aa8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 TCL1BO95988 128 aa8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 TMEM95Q3KNT9 176 aa8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 FANCD2OSQ96PS1 177 aa8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 JPT2Q9H910 190 aa8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 ERG28Q9UKR5 140 aa8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 USP9YO00507 2555 aaPredicted RBP8.04□□□□□ -1.12
PRPF38B-201ENST00000370021 CEACAM4O75871 244 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms