RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 TRIAP1O43715 76 aa3.9□□□□□ -1.79
UBE3D-202ENST00000369746 NPYP01303 97 aa3.9□□□□□ -1.79
UBE3D-202ENST00000369746 TCRAP04437 139 aa3.9□□□□□ -1.79
UBE3D-202ENST00000369746 PVRIGQ6DKI7 326 aa3.9□□□□□ -1.79
UBE3D-202ENST00000369746 AMN1Q8IY45 258 aa3.9□□□□□ -1.79
UBE3D-202ENST00000369746 METTL26Q96S19 204 aa3.9□□□□□ -1.79
UBE3D-202ENST00000369746 LAMTOR3Q9UHA4 124 aa3.9□□□□□ -1.79
UBE3D-202ENST00000369746 GTF3C1Q12789 2109 aa3.9□□□□□ -1.79
UBE3D-202ENST00000369746 UNC13CQ8NB66 2214 aa3.9□□□□□ -1.79
UBE3D-202ENST00000369746 TRAV2A0A0B4J234 112 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 TRAV8-2A0A0B4J237 113 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 MYMXA0A1B0GTQ4 84 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 COL8A2P25067 703 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 GCHFRP30047 84 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 HBBP68871 147 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 ZNF793Q6ZN11 406 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 TMEM75Q8N9X5 138 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 SMR3AQ99954 134 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 IGLV1-36A0A0B4J1U3 117 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 ATOX1O00244 68 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 NSUN5P1Q3KNT7 163 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 TMEM170BQ5T4T1 132 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 MARCH3Q86UD3 253 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 COPS9Q8WXC6 57 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 NABP1Q96AH0 204 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 RTL8AQ9BWD3 113 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 NPCDR1Q9BY65 106 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 TMEM167BQ9NRX6 74 aa3.89□□□□□ -1.79
UBE3D-202ENST00000369746 SMG1Q96Q15 3661 aaKnown RBP3.88□□□□□ -1.79
UBE3D-202ENST00000369746 EXPH5Q8NEV8 1989 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 SCO2A0A1W2PP80 73 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 MGST3O14880 152 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 Q6ZRU5 148 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 IFI27L1Q96BM0 104 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 MRPL20Q9BYC9 149 aaKnown RBP3.88□□□□□ -1.79
UBE3D-202ENST00000369746 AICDAQ9GZX7 198 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 FAM30AQ9NZY2 134 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 DOCK11Q5JSL3 2073 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 TRBV7-3A0A075B6L6 115 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 IGKV1D-13A0A0B4J2D9 117 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 C4orf51C9J302 202 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 FRMD6-AS1P0C7T7 363 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 IGKV1-13P0DP09 117 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 MYCNOSP40205 109 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 BEAN1Q3B7T3 259 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 FAM222AQ5U5X8 452 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 AAED1Q7RTV5 226 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 RFESDQ8TAC1 157 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 DCANP1Q8TF63 244 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 MGST2Q99735 147 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 HDHD3Q9BSH5 251 aaPredicted RBP3.88□□□□□ -1.79
UBE3D-202ENST00000369746 AGPAT4-IT1Q9H0P7 198 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 CACNG5Q9UF02 275 aa3.88□□□□□ -1.79
UBE3D-202ENST00000369746 TRBV25-1A0A075B6N4 114 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 TRGV5A0A0B4J1U4 118 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 UBE2L5PA0A1B0GUS4 154 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 IGHV4-31P0DP07 118 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 MGST1P10620 155 aaKnown RBP3.87□□□□□ -1.79
UBE3D-202ENST00000369746 MFAP2P55001 183 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 HIST1H4AP62805 103 aaKnown RBP3.87□□□□□ -1.79
UBE3D-202ENST00000369746 LINC00173Q6ZV60 143 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 ZNF491Q8N8L2 437 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 DSCR8Q96T75 97 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 KIAA1549Q9HCM3 1950 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 IGHV3OR15-7A0A075B7D8 119 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 RBAKDNA6NC62 111 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 LINC01546A6NGU7 62 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 PMS2P5A8MQ11 134 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 LGALS9O00182 355 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 IGLV2-8P01709 118 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 IGKCP01834 107 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 CD7P09564 240 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 UBE2D1P51668 147 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 MRPS36P82909 103 aaKnown RBP3.87□□□□□ -1.79
UBE3D-202ENST00000369746 CFHR3Q02985 330 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 WDR86Q86TI4 376 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 CNRIP1Q96F85 164 aaPredicted RBP3.87□□□□□ -1.79
UBE3D-202ENST00000369746 TRGV9Q99603 122 aa3.87□□□□□ -1.79
UBE3D-202ENST00000369746 FBN1P35555 2871 aaKnown RBP3.87□□□□□ -1.79
UBE3D-202ENST00000369746 IGKV3D-11A0A0A0MRZ8 115 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 SS18L1O75177 396 aaPredicted RBP3.86□□□□□ -1.79
UBE3D-202ENST00000369746 IGHG2P01859 326 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 PIK3CD-AS1Q5SR53 167 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 GDF5OSQ5U4N7 250 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 Q6ZQT7 251 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 ZNF414Q96IQ9 312 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 CHCHD5Q9BSY4 110 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 SHANK2-AS3Q9BTD1 123 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 ZNF492Q9P255 531 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 ANKHD1Q8IWZ3 2542 aaKnown RBP3.86□□□□□ -1.79
UBE3D-202ENST00000369746 CACNA1CQ13936 2221 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 TRAV12-2A0A075B6T6 113 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 TRAV13-1A0A0B4J241 112 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 K7ERJ3 54 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 STATHP02808 62 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 MED14OSP0DP75 135 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 SDIM1Q6ZPB5 146 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 Q8N7P7 452 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 C10orf105Q8TEF2 133 aa3.86□□□□□ -1.79
UBE3D-202ENST00000369746 CCL17Q92583 94 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms