RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 HLA-DMBP28068 263 aa12.41□□□□□ -0.42
SYNCRIP-202ENST00000369622 TWIST1Q15672 202 aa12.41□□□□□ -0.42
SYNCRIP-202ENST00000369622 MRPL51Q4U2R6 128 aaKnown RBP12.41□□□□□ -0.42
SYNCRIP-202ENST00000369622 IGHV3OR16-13A0A075B7E8 117 aa12.41□□□□□ -0.42
SYNCRIP-202ENST00000369622 IGHV3-74A0A0B4J1X5 117 aa12.41□□□□□ -0.42
SYNCRIP-202ENST00000369622 OVOL3O00110 214 aa12.41□□□□□ -0.42
SYNCRIP-202ENST00000369622 HOXA3O43365 443 aaPredicted RBP12.41□□□□□ -0.42
SYNCRIP-202ENST00000369622 HLA-DRB4P13762 266 aa12.4□□□□□ -0.42
SYNCRIP-202ENST00000369622 SRSF9Q13242 221 aaKnown RBP eCLIP12.4□□□□□ -0.422e-6■■□□□ 12.5
SYNCRIP-202ENST00000369622 PPDPFLQ8WWR9 84 aa12.4□□□□□ -0.42
SYNCRIP-202ENST00000369622 HLA-DRB4X5D2U9 266 aa12.4□□□□□ -0.42
SYNCRIP-202ENST00000369622 TRAV8-2A0A0B4J237 113 aa12.4□□□□□ -0.42
SYNCRIP-202ENST00000369622 SH2D1AO60880 128 aa12.4□□□□□ -0.42
SYNCRIP-202ENST00000369622 MFAP4P55083 255 aa12.4□□□□□ -0.42
SYNCRIP-202ENST00000369622 MEIG1Q5JSS6 88 aa12.4□□□□□ -0.42
SYNCRIP-202ENST00000369622 MRPL35Q9NZE8 188 aaKnown RBP12.4□□□□□ -0.42
SYNCRIP-202ENST00000369622 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.42
SYNCRIP-202ENST00000369622 ORM1P02763 201 aa12.4□□□□□ -0.43
SYNCRIP-202ENST00000369622 GATA1P15976 413 aaPredicted RBP12.4□□□□□ -0.43
SYNCRIP-202ENST00000369622 FOXC1Q12948 553 aa12.4□□□□□ -0.43
SYNCRIP-202ENST00000369622 A0A087WX48 190 aa12.39□□□□□ -0.43
SYNCRIP-202ENST00000369622 IGHV3-66A0A0C4DH42 116 aa12.39□□□□□ -0.43
SYNCRIP-202ENST00000369622 ZNF688P0C7X2 276 aa12.39□□□□□ -0.43
SYNCRIP-202ENST00000369622 J3KRW8 73 aa12.39□□□□□ -0.43
SYNCRIP-202ENST00000369622 SNCGO76070 127 aa12.39□□□□□ -0.43
SYNCRIP-202ENST00000369622 ANKRD29Q8N6D5 301 aa12.39□□□□□ -0.43
SYNCRIP-202ENST00000369622 C21orf62Q9NYP8 219 aa12.38□□□□□ -0.43
SYNCRIP-202ENST00000369622 LY6LH3BQJ8 138 aa12.37□□□□□ -0.43
SYNCRIP-202ENST00000369622 HOXB4P17483 251 aaPredicted RBP12.37□□□□□ -0.43
SYNCRIP-202ENST00000369622 NDPQ00604 133 aa12.37□□□□□ -0.43
SYNCRIP-202ENST00000369622 FAM104BQ5XKR9 115 aa12.37□□□□□ -0.43
SYNCRIP-202ENST00000369622 TEN1Q86WV5 123 aa12.37□□□□□ -0.43
SYNCRIP-202ENST00000369622 FANCD2OSQ96PS1 177 aa12.37□□□□□ -0.43
SYNCRIP-202ENST00000369622 MSRB1Q9NZV6 116 aa12.37□□□□□ -0.43
SYNCRIP-202ENST00000369622 DPM2O94777 84 aa12.37□□□□□ -0.43
SYNCRIP-202ENST00000369622 EGR2P11161 476 aaPredicted RBP12.37□□□□□ -0.43
SYNCRIP-202ENST00000369622 IGHV3-49A0A0A0MS15 119 aa12.36□□□□□ -0.43
SYNCRIP-202ENST00000369622 IFITM1P13164 125 aa12.36□□□□□ -0.43
SYNCRIP-202ENST00000369622 MRPL23Q16540 153 aaKnown RBP12.36□□□□□ -0.43
SYNCRIP-202ENST00000369622 LYPD1Q8N2G4 141 aa12.36□□□□□ -0.43
SYNCRIP-202ENST00000369622 TMEM158Q8WZ71 300 aa12.36□□□□□ -0.43
SYNCRIP-202ENST00000369622 TIMD4Q96H15 378 aa12.36□□□□□ -0.43
SYNCRIP-202ENST00000369622 RHODO00212 210 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 ZNF80P51504 273 aaPredicted RBP12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 RNF5Q99942 180 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 RAB1BQ9H0U4 201 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 CCL21O00585 134 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 MRPS12O15235 138 aaKnown RBP12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 SCGB1C2P0DMR2 95 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 ERCC8Q13216 396 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 KLK15Q9H2R5 256 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 TCL1BO95988 128 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 TCF15Q12870 199 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 ECSCRQ19T08 205 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 DYNAPQ8N1N2 210 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 PRR25Q96S07 402 aa12.35□□□□□ -0.43
SYNCRIP-202ENST00000369622 CFHR4Q92496 578 aa12.34□□□□□ -0.43
SYNCRIP-202ENST00000369622 A8MWV9 139 aa12.34□□□□□ -0.43
SYNCRIP-202ENST00000369622 RPL7P18124 248 aaKnown RBP12.34□□□□□ -0.43
SYNCRIP-202ENST00000369622 ATP6V0E2Q8NHE4 81 aa12.34□□□□□ -0.43
SYNCRIP-202ENST00000369622 VKORC1Q9BQB6 163 aa12.34□□□□□ -0.43
SYNCRIP-202ENST00000369622 MAP1AP78559 2803 aaPredicted RBP12.34□□□□□ -0.43
SYNCRIP-202ENST00000369622 LOC107984640A0A0U1RRK4 108 aa12.33□□□□□ -0.44
SYNCRIP-202ENST00000369622 H7C2G1 150 aa12.33□□□□□ -0.44
SYNCRIP-202ENST00000369622 PAX8Q06710 450 aa12.33□□□□□ -0.44
SYNCRIP-202ENST00000369622 CDSNQ15517 529 aa12.33□□□□□ -0.44
SYNCRIP-202ENST00000369622 RNF182Q8N6D2 247 aa12.33□□□□□ -0.44
SYNCRIP-202ENST00000369622 IGLV11-55A0A075B6I3 123 aa12.33□□□□□ -0.44
SYNCRIP-202ENST00000369622 TRBV7-3A0A075B6L6 115 aa12.33□□□□□ -0.44
SYNCRIP-202ENST00000369622 PF4V1P10720 104 aa12.33□□□□□ -0.44
SYNCRIP-202ENST00000369622 MAP1LC3AQ9H492 121 aa12.33□□□□□ -0.44
SYNCRIP-202ENST00000369622 EFNA4P52798 201 aa12.32□□□□□ -0.44
SYNCRIP-202ENST00000369622 F8W735 103 aaPredicted RBP12.32□□□□□ -0.44
SYNCRIP-202ENST00000369622 TRBV6-1A0A0K0K1D8 114 aa12.31□□□□□ -0.44
SYNCRIP-202ENST00000369622 CRIP2P52943 208 aaPredicted RBP12.31□□□□□ -0.44
SYNCRIP-202ENST00000369622 SCGB1D4Q6XE38 83 aa12.31□□□□□ -0.44
SYNCRIP-202ENST00000369622 RAX2Q96IS3 184 aa12.31□□□□□ -0.44
SYNCRIP-202ENST00000369622 CHCHD5Q9BSY4 110 aa12.31□□□□□ -0.44
SYNCRIP-202ENST00000369622 RAXQ9Y2V3 346 aa12.31□□□□□ -0.44
SYNCRIP-202ENST00000369622 CTSGP08311 255 aa12.31□□□□□ -0.44
SYNCRIP-202ENST00000369622 PDE6HQ13956 83 aa12.31□□□□□ -0.44
SYNCRIP-202ENST00000369622 VMO1Q7Z5L0 202 aa12.31□□□□□ -0.44
SYNCRIP-202ENST00000369622 OR11H6Q8NGC7 330 aa12.3□□□□□ -0.44
SYNCRIP-202ENST00000369622 PRAC2D3DTV9 90 aa12.3□□□□□ -0.44
SYNCRIP-202ENST00000369622 SRD5A1P18405 259 aa12.29□□□□□ -0.44
SYNCRIP-202ENST00000369622 ZNF493Q6ZR52 646 aa12.29□□□□□ -0.44
SYNCRIP-202ENST00000369622 NPBQ8NG41 125 aa12.29□□□□□ -0.44
SYNCRIP-202ENST00000369622 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
SYNCRIP-202ENST00000369622 C9JAW5 83 aa12.29□□□□□ -0.44
SYNCRIP-202ENST00000369622 LY6G5BQ8NDX9 201 aa12.29□□□□□ -0.44
SYNCRIP-202ENST00000369622 ZMAT4Q9H898 229 aa12.29□□□□□ -0.44
SYNCRIP-202ENST00000369622 C15orf32Q32M92 178 aa12.29□□□□□ -0.44
SYNCRIP-202ENST00000369622 TRPT1Q86TN4 253 aaKnown RBP12.29□□□□□ -0.44
SYNCRIP-202ENST00000369622 DEFB104AQ8WTQ1 72 aa12.29□□□□□ -0.44
SYNCRIP-202ENST00000369622 MYMXA0A1B0GTQ4 84 aa12.28□□□□□ -0.44
SYNCRIP-202ENST00000369622 SRSF1Q07955 248 aaKnown RBP eCLIP12.28□□□□□ -0.442e-6■■□□□ 13.7
SYNCRIP-202ENST00000369622 PLEKHB2Q96CS7 222 aa12.28□□□□□ -0.44
SYNCRIP-202ENST00000369622 HRNRQ86YZ3 2850 aaPredicted RBP12.28□□□□□ -0.44
SYNCRIP-202ENST00000369622 C15orf53Q8NAA6 179 aa12.27□□□□□ -0.44
SYNCRIP-202ENST00000369622 KLHL30-AS1Q8NEE0 82 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms