RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 IGLV11-55A0A075B6I3 123 aa9.49□□□□□ -0.89
PHGDH-201ENST00000369407 IGLV2-18A0A075B6J9 118 aa9.49□□□□□ -0.89
PHGDH-201ENST00000369407 LINC01548A6NM66 108 aa9.49□□□□□ -0.89
PHGDH-201ENST00000369407 ATP5LO75964 103 aa9.49□□□□□ -0.89
PHGDH-201ENST00000369407 TEX29Q8N6K0 151 aa9.49□□□□□ -0.89
PHGDH-201ENST00000369407 ERG28Q9UKR5 140 aa9.49□□□□□ -0.89
PHGDH-201ENST00000369407 COL6A6A6NMZ7 2263 aa9.48□□□□□ -0.89
PHGDH-201ENST00000369407 SHISA9B4DS77 424 aa9.48□□□□□ -0.89
PHGDH-201ENST00000369407 CTSGP08311 255 aa9.48□□□□□ -0.89
PHGDH-201ENST00000369407 LY6LH3BQJ8 138 aa9.48□□□□□ -0.89
PHGDH-201ENST00000369407 LAGE3Q14657 143 aa9.48□□□□□ -0.89
PHGDH-201ENST00000369407 RRN3P1Q2M238 152 aa9.48□□□□□ -0.89
PHGDH-201ENST00000369407 PIFOQ8TCI5 191 aa9.48□□□□□ -0.89
PHGDH-201ENST00000369407 CCDC179H3BU77 68 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 FOXI1Q12951 378 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 FHL3Q13643 280 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 Q6ZS92 163 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 PSMG3-AS1Q96PY0 264 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 CDIP1Q9H305 208 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 IGF2RP11717 2491 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 BRI3O95415 125 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 PRTN3P24158 256 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 ZFAND6Q6FIF0 208 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 NRACQ8N912 160 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 PRO0461Q9UI25 63 aa9.47□□□□□ -0.89
PHGDH-201ENST00000369407 A0A087WX48 190 aa9.46□□□□□ -0.89
PHGDH-201ENST00000369407 SPANXN1Q5VSR9 72 aa9.46□□□□□ -0.89
PHGDH-201ENST00000369407 AGPAT4-IT1Q9H0P7 198 aa9.46□□□□□ -0.89
PHGDH-201ENST00000369407 DPM3Q9P2X0 92 aa9.46□□□□□ -0.89
PHGDH-201ENST00000369407 OR11H12B2RN74 326 aa9.46□□□□□ -0.9
PHGDH-201ENST00000369407 EMP1P54849 157 aa9.46□□□□□ -0.9
PHGDH-201ENST00000369407 OR11H1Q8NG94 326 aa9.46□□□□□ -0.9
PHGDH-201ENST00000369407 OR11H2Q8NH07 326 aa9.46□□□□□ -0.9
PHGDH-201ENST00000369407 NFE4Q86UQ8 179 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 TRBV7-3A0A075B6L6 115 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 LINC01546A6NGU7 62 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 IGF1P05019 195 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 HLA-DRB4P13762 266 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 MORN3Q6PF18 240 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-201ENST00000369407 ZFP2Q6ZN57 461 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 COX8CQ7Z4L0 72 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 VKORC1Q9BQB6 163 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 CNFNQ9BYD5 112 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 HLA-DRB4X5D2U9 266 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 COL12A1Q99715 3063 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 DEFB1P60022 68 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 LINC01560Q8TB33 94 aa9.45□□□□□ -0.9
PHGDH-201ENST00000369407 SPTBN4Q9H254 2564 aa9.44□□□□□ -0.9
PHGDH-201ENST00000369407 CELSR1Q9NYQ6 3014 aa9.44□□□□□ -0.9
PHGDH-201ENST00000369407 ECSCRQ19T08 205 aa9.44□□□□□ -0.9
PHGDH-201ENST00000369407 LINC01559Q495D7 138 aa9.44□□□□□ -0.9
PHGDH-201ENST00000369407 KLHL30-AS1Q8NEE0 82 aa9.44□□□□□ -0.9
PHGDH-201ENST00000369407 LINC01549A6NIU2 74 aa9.44□□□□□ -0.9
PHGDH-201ENST00000369407 M0R381 172 aa9.44□□□□□ -0.9
PHGDH-201ENST00000369407 SMCPP49901 116 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-201ENST00000369407 PLEKHB2Q96CS7 222 aa9.44□□□□□ -0.9
PHGDH-201ENST00000369407 RPL39LQ96EH5 51 aaKnown RBP9.44□□□□□ -0.9
PHGDH-201ENST00000369407 ANKHD1Q8IWZ3 2542 aaKnown RBP9.43□□□□□ -0.9
PHGDH-201ENST00000369407 IGHV7-4-1A0A0J9YVY3 117 aa9.43□□□□□ -0.9
PHGDH-201ENST00000369407 MYMXA0A1B0GTQ4 84 aa9.43□□□□□ -0.9
PHGDH-201ENST00000369407 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-201ENST00000369407 HOXA3O43365 443 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-201ENST00000369407 PRR30Q53SZ7 412 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-201ENST00000369407 TTC32Q5I0X7 151 aa9.43□□□□□ -0.9
PHGDH-201ENST00000369407 SCGB3A1Q96QR1 104 aa9.43□□□□□ -0.9
PHGDH-201ENST00000369407 LGALS1P09382 135 aaKnown RBP9.43□□□□□ -0.9
PHGDH-201ENST00000369407 ATP5J2P56134 94 aa9.43□□□□□ -0.9
PHGDH-201ENST00000369407 SRSF1Q07955 248 aaKnown RBP eCLIP9.43□□□□□ -0.92e-10■■■□□ 18.2
PHGDH-201ENST00000369407 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 SCGB1D4Q6XE38 83 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 RNF5Q99942 180 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 C15orf32Q32M92 178 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 RAXQ9Y2V3 346 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 NCOR2Q9Y618 2525 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 CHD8Q9HCK8 2581 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 F8VRH5 84 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 H7C1H1 209 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 TMEM78Q5T7P6 136 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 ZNF502Q8TBZ5 544 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 PRADC1Q9BSG0 188 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 MSRB2Q9Y3D2 182 aa9.42□□□□□ -0.9
PHGDH-201ENST00000369407 SLC25A16P16260 332 aa9.41□□□□□ -0.9
PHGDH-201ENST00000369407 PLNP26678 52 aa9.41□□□□□ -0.9
PHGDH-201ENST00000369407 SRSF9Q13242 221 aaKnown RBP eCLIP9.41□□□□□ -0.9
PHGDH-201ENST00000369407 PRR9Q5T870 116 aa9.41□□□□□ -0.9
PHGDH-201ENST00000369407 IGFL3Q6UXB1 125 aa9.41□□□□□ -0.9
PHGDH-201ENST00000369407 CLEC19AQ6UXS0 136 aa9.41□□□□□ -0.9
PHGDH-201ENST00000369407 NPBQ8NG41 125 aa9.41□□□□□ -0.9
PHGDH-201ENST00000369407 ZNF815PA8K554 130 aa9.41□□□□□ -0.9
PHGDH-201ENST00000369407 GRNP28799 593 aaKnown RBP9.41□□□□□ -0.9
PHGDH-201ENST00000369407 ZNF672Q499Z4 452 aaPredicted RBP9.41□□□□□ -0.9
PHGDH-201ENST00000369407 GAGE12JA6NER3 117 aa9.4□□□□□ -0.9
PHGDH-201ENST00000369407 BUB3O43684 328 aa9.4□□□□□ -0.9
PHGDH-201ENST00000369407 GAGE7O76087 117 aa9.4□□□□□ -0.9
PHGDH-201ENST00000369407 GAGE12FP0CL80 117 aa9.4□□□□□ -0.9
PHGDH-201ENST00000369407 GAGE12GP0CL81 117 aa9.4□□□□□ -0.9
PHGDH-201ENST00000369407 GAGE12IP0CL82 117 aa9.4□□□□□ -0.9
PHGDH-201ENST00000369407 GAGE4Q13068 117 aa9.4□□□□□ -0.9
PHGDH-201ENST00000369407 C14orf178Q8N769 122 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-201ENST00000369407 MGPP08493 103 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms