RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 PDE6HQ13956 83 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 LINC01587Q99440 93 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 PKDREJQ9NTG1 2253 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 IGLV3-32A0A0A0MS00 114 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 TMEM200BQ69YZ2 307 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 DYNAPQ8N1N2 210 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 PLXND1Q9Y4D7 1925 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 PMAIP1Q13794 54 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 ZNRF1Q8ND25 227 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 DPH3Q96FX2 82 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 CCL13Q99616 98 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 PRO0461Q9UI25 63 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 IGKV3D-20A0A0C4DH25 116 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 CCL21O00585 134 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 PYGO1Q9Y3Y4 419 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 TRBV7-7A0A0K0K1E9 115 aa8.19□□□□□ -1.1
PRDM1-201ENST00000369089 INS-IGF2F8WCM5 200 aa8.19□□□□□ -1.1
PRDM1-201ENST00000369089 C14orf178Q8N769 122 aaPredicted RBP8.19□□□□□ -1.1
PRDM1-201ENST00000369089 TRAV26-2A0A0B4J265 109 aa8.19□□□□□ -1.1
PRDM1-201ENST00000369089 MYO7BQ6PIF6 2116 aa8.19□□□□□ -1.1
PRDM1-201ENST00000369089 FANCD2OSQ96PS1 177 aa8.19□□□□□ -1.1
PRDM1-201ENST00000369089 TMEM14CQ9P0S9 112 aa8.19□□□□□ -1.1
PRDM1-201ENST00000369089 ZNF407Q9C0G0 2248 aa8.19□□□□□ -1.1
PRDM1-201ENST00000369089 TM4SF5O14894 197 aa8.19□□□□□ -1.1
PRDM1-201ENST00000369089 CRYGAP11844 174 aa8.19□□□□□ -1.1
PRDM1-201ENST00000369089 UBE2D3P61077 147 aa8.19□□□□□ -1.1
PRDM1-201ENST00000369089 UBE2D2P62837 147 aa8.19□□□□□ -1.1
PRDM1-201ENST00000369089 KLF14Q8TD94 323 aaPredicted RBP8.19□□□□□ -1.1
PRDM1-201ENST00000369089 EFNA2O43921 213 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 IGHV3-33P01772 117 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 NHLRC4P0CG21 123 aaPredicted RBP8.18□□□□□ -1.1
PRDM1-201ENST00000369089 ERCC8Q13216 396 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 FOXL2NBQ6ZUU3 175 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 PHLDA1Q8WV24 401 aaPredicted RBP8.18□□□□□ -1.1
PRDM1-201ENST00000369089 PRR25Q96S07 402 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 SS18L1O75177 396 aaPredicted RBP8.18□□□□□ -1.1
PRDM1-201ENST00000369089 CD59P13987 128 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 FAM167A-AS1Q96KT0 104 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 TRAV23DV6A0A075B6W5 121 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 TRBV30A0A0K0K1B3 111 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 UBE2L6O14933 153 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 BUB3O43684 328 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 ELANEP08246 267 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 GATA1P15976 413 aaPredicted RBP8.18□□□□□ -1.1
PRDM1-201ENST00000369089 C10orf55Q5SWW7 151 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 Q6ZT83 130 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 SHANK2-AS3Q9BTD1 123 aa8.18□□□□□ -1.1
PRDM1-201ENST00000369089 PRIMA1Q86XR5 153 aa8.17□□□□□ -1.1
PRDM1-201ENST00000369089 KIAA1549Q9HCM3 1950 aa8.17□□□□□ -1.1
PRDM1-201ENST00000369089 A0A1W2PRX2 142 aa8.17□□□□□ -1.1
PRDM1-201ENST00000369089 CLPSP04118 112 aa8.17□□□□□ -1.1
PRDM1-201ENST00000369089 PRR7Q8TB68 274 aa8.17□□□□□ -1.1
PRDM1-201ENST00000369089 IGHV1-69DA0A0B4J2H0 117 aa8.17□□□□□ -1.1
PRDM1-201ENST00000369089 TMEM167AQ8TBQ9 72 aa8.17□□□□□ -1.1
PRDM1-201ENST00000369089 PLCE1Q9P212 2302 aa8.16□□□□□ -1.1
PRDM1-201ENST00000369089 IGKV3-7A0A075B6H7 116 aa8.16□□□□□ -1.1
PRDM1-201ENST00000369089 NDUFC1O43677 76 aa8.16□□□□□ -1.1
PRDM1-201ENST00000369089 PCNX2A6NKB5 2137 aa8.16□□□□□ -1.1
PRDM1-201ENST00000369089 UBE2E1P51965 193 aa8.16□□□□□ -1.1
PRDM1-201ENST00000369089 CACNA1BQ00975 2339 aa8.16□□□□□ -1.1
PRDM1-201ENST00000369089 NSUN5P1Q3KNT7 163 aa8.16□□□□□ -1.1
PRDM1-201ENST00000369089 FOXE3Q13461 319 aa8.16□□□□□ -1.1
PRDM1-201ENST00000369089 NDPQ00604 133 aa8.15□□□□□ -1.1
PRDM1-201ENST00000369089 ZFHX2Q9C0A1 2572 aaPredicted RBP8.15□□□□□ -1.1
PRDM1-201ENST00000369089 TRBV7-1A0A0A6YYK4 115 aa8.15□□□□□ -1.1
PRDM1-201ENST00000369089 A0A0J9YY99 117 aa8.15□□□□□ -1.1
PRDM1-201ENST00000369089 K7EM74 188 aa8.15□□□□□ -1.1
PRDM1-201ENST00000369089 HTN1P15515 57 aa8.15□□□□□ -1.1
PRDM1-201ENST00000369089 FAM201AQ5SY85 155 aa8.15□□□□□ -1.1
PRDM1-201ENST00000369089 DEFB104AQ8WTQ1 72 aa8.15□□□□□ -1.1
PRDM1-201ENST00000369089 TOMM7Q9P0U1 55 aa8.15□□□□□ -1.1
PRDM1-201ENST00000369089 TRAV13-2A0A0B4J235 113 aa8.15□□□□□ -1.1
PRDM1-201ENST00000369089 WISP1O95388 367 aa8.15□□□□□ -1.1
PRDM1-201ENST00000369089 ABCA4P78363 2273 aa8.15□□□□□ -1.11
PRDM1-201ENST00000369089 IGKV3D-15A0A087WSY6 115 aa8.15□□□□□ -1.11
PRDM1-201ENST00000369089 IGKV3-15P01624 115 aa8.15□□□□□ -1.11
PRDM1-201ENST00000369089 TRIAP1O43715 76 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 EDN2P20800 178 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 SMCPP49901 116 aaPredicted RBP8.14□□□□□ -1.11
PRDM1-201ENST00000369089 THAP8Q8NA92 274 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 PINLYPA6NC86 204 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 UBE2D1P51668 147 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 IGHV3-35A0A0C4DH35 117 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 ADARB2-AS1A8MUL3 147 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 PAX4O43316 350 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 RNASE4P34096 147 aaKnown RBP8.14□□□□□ -1.11
PRDM1-201ENST00000369089 LINC00158P58513 81 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 DAZ2Q13117 558 aaKnown RBP8.14□□□□□ -1.11
PRDM1-201ENST00000369089 ATP5EP2Q5VTU8 51 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 DAZ4Q86SG3 579 aaKnown RBP8.14□□□□□ -1.11
PRDM1-201ENST00000369089 SPTSSBQ8NFR3 76 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 C9orf85Q96MD7 179 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 DAZ1Q9NQZ3 744 aaKnown RBP8.14□□□□□ -1.11
PRDM1-201ENST00000369089 DAZ3Q9NR90 486 aaKnown RBP8.14□□□□□ -1.11
PRDM1-201ENST00000369089 S4R3C0 116 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 WNK2Q9Y3S1 2297 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 EGR2P11161 476 aaPredicted RBP8.14□□□□□ -1.11
PRDM1-201ENST00000369089 ODF3Q96PU9 254 aa8.14□□□□□ -1.11
PRDM1-201ENST00000369089 GOLGB1Q14789 3259 aaKnown RBP8.13□□□□□ -1.11
PRDM1-201ENST00000369089 LINC00322Q6ZN03 302 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms