RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 DAZAP1Q96EP5 407 aaKnown RBP6.51□□□□□ -1.37
SNX27-201ENST00000368838 C20orf173Q96LM9 149 aa6.51□□□□□ -1.37
SNX27-201ENST00000368838 VGLL1Q99990 258 aa6.51□□□□□ -1.37
SNX27-201ENST00000368838 NAT8BQ9UHF3 227 aa6.51□□□□□ -1.37
SNX27-201ENST00000368838 IGKV2-40A0A087WW87 121 aaPredicted RBP6.5□□□□□ -1.37
SNX27-201ENST00000368838 A0A1W2PPQ1 181 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 IZUMO1RA6ND01 250 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 ZNF705GA8MUZ8 300 aaPredicted RBP6.5□□□□□ -1.37
SNX27-201ENST00000368838 ZNF705FA8MVS1 300 aaPredicted RBP6.5□□□□□ -1.37
SNX27-201ENST00000368838 PHOX2AO14813 284 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 IGKV2D-40P01614 121 aaPredicted RBP6.5□□□□□ -1.37
SNX27-201ENST00000368838 MED14OSP0DP75 135 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 MGST1P10620 155 aaKnown RBP6.5□□□□□ -1.37
SNX27-201ENST00000368838 HLA-DMBP28068 263 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 RBPMS2Q6ZRY4 209 aaKnown RBP6.5□□□□□ -1.37
SNX27-201ENST00000368838 TMEM61Q8N0U2 210 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 RNF182Q8N6D2 247 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 ZFAND2AQ8N6M9 145 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 ZNF738Q8NE65 137 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 RCHY1Q96PM5 261 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 GNB1LQ9BYB4 327 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 RNASE7Q9H1E1 156 aaKnown RBP6.5□□□□□ -1.37
SNX27-201ENST00000368838 TP53TG3Q9ULZ0 132 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 STARD9Q9P2P6 4700 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 CSMD3Q7Z407 3707 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 A0A1B0GXF2 115 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 PRSS29PA6NIE9 313 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 FRMD6-AS1P0C7T7 363 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 TSPOP30536 169 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 TDRG1Q3Y452 100 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 ZFAND6Q6FIF0 208 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 C20orf144Q9BQM9 153 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 RPH3ALQ9UNE2 315 aa6.5□□□□□ -1.37
SNX27-201ENST00000368838 LYSTQ99698 3801 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 EPPK1P58107 5090 aaKnown RBP6.49□□□□□ -1.37
SNX27-201ENST00000368838 IGHV4-4A0A075B6R2 117 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 TGIF2-C20orf24A0A0A6YYL0 155 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 TRAV21A0A0B4J279 112 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 HIGD1CA8MV81 97 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 F2Z2F3 143 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 C3orf84H3BNL1 204 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 AMBPP02760 352 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 S100A8P05109 93 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 IGLC6P0CF74 106 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 HLA-DRB4P13762 266 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 EDN2P20800 178 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 RAB5BP61020 215 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 CASC10Q5T4H9 136 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 IGFL4Q6B9Z1 124 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 EBLN2Q6P2I7 272 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 ZNF575Q86XF7 245 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 NUP35Q8NFH5 326 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 MUC7Q8TAX7 377 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 DYNLRB2Q8TF09 96 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 SGK494Q96LW2 274 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 NEU1Q99519 415 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 LINC00467Q9BRT7 94 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 HLA-DRB4X5D2U9 266 aa6.49□□□□□ -1.37
SNX27-201ENST00000368838 DNAH1Q9P2D7 4330 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 C1orf196B1AJZ1 125 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 SH2D1AO60880 128 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 SCGB1D1O95968 90 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 HLA-DQA1P01909 254 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 OR5AL1P0C617 328 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 CTRLP40313 264 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 LEPP41159 167 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 ZNF80P51504 273 aaPredicted RBP6.48□□□□□ -1.37
SNX27-201ENST00000368838 CD300EQ496F6 205 aaPredicted RBP6.48□□□□□ -1.37
SNX27-201ENST00000368838 COA6Q5JTJ3 125 aaKnown RBP6.48□□□□□ -1.37
SNX27-201ENST00000368838 ACTL10Q5JWF8 245 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 AMTNQ6UX39 209 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 NHLRC2Q8NBF2 726 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 OR2D3Q8NGH3 330 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 GTSF1Q8WW33 167 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 C8orf49Q96NF6 230 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 URGCP-MRPS24S4R325 110 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 HYDINQ4G0P3 5121 aa6.48□□□□□ -1.37
SNX27-201ENST00000368838 TMEM189A5PLL7 270 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 H3BMM0 161 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 SNAI2O43623 268 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 TNFRSF6BO95407 300 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 CDKN1BP46527 198 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 RPS10P46783 165 aaKnown RBP6.47□□□□□ -1.37
SNX27-201ENST00000368838 ERCC8Q13216 396 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 PSMG4Q5JS54 123 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 PRR27Q6MZM9 219 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 ZNF493Q6ZR52 646 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 KCNS1Q96KK3 526 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 SPXQ9BT56 116 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 MAP6D1Q9H9H5 199 aa6.47□□□□□ -1.37
SNX27-201ENST00000368838 IGKV3D-20A0A0C4DH25 116 aa6.46□□□□□ -1.38
SNX27-201ENST00000368838 A0A1B0GUT8 65 aa6.46□□□□□ -1.38
SNX27-201ENST00000368838 ZNF324O75467 553 aaPredicted RBP6.46□□□□□ -1.38
SNX27-201ENST00000368838 ZNF688P0C7X2 276 aa6.46□□□□□ -1.38
SNX27-201ENST00000368838 CTAG1AP78358 180 aa6.46□□□□□ -1.38
SNX27-201ENST00000368838 PIK3CD-AS1Q5SR53 167 aa6.46□□□□□ -1.38
SNX27-201ENST00000368838 Q8TAT8 98 aa6.46□□□□□ -1.38
SNX27-201ENST00000368838 FRZBQ92765 325 aa6.46□□□□□ -1.38
SNX27-201ENST00000368838 SCRT2Q9NQ03 307 aa6.46□□□□□ -1.38
SNX27-201ENST00000368838 TRGC2P03986 189 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms