RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 HOXA3O43365 443 aaPredicted RBP20.39■□□□□ 0.86
EFNA1-202ENST00000368407 FOXE3Q13461 319 aa20.39■□□□□ 0.86
EFNA1-202ENST00000368407 KIR3DS1Q14943 382 aa20.39■□□□□ 0.86
EFNA1-202ENST00000368407 ZMAT4Q9H898 229 aa20.39■□□□□ 0.86
EFNA1-202ENST00000368407 A6NDX4 124 aa20.39■□□□□ 0.85
EFNA1-202ENST00000368407 CKS2P33552 79 aa20.39■□□□□ 0.85
EFNA1-202ENST00000368407 LOC389332A0A1B0GUA5 103 aa20.38■□□□□ 0.85
EFNA1-202ENST00000368407 TEP1Q99973 2627 aaKnown RBP20.38■□□□□ 0.85
EFNA1-202ENST00000368407 A0A0G2JLM5 398 aa20.37■□□□□ 0.85
EFNA1-202ENST00000368407 DUX5Q96PT3 197 aa20.37■□□□□ 0.85
EFNA1-202ENST00000368407 MAP1LC3AQ9H492 121 aa20.37■□□□□ 0.85
EFNA1-202ENST00000368407 NPYP01303 97 aa20.37■□□□□ 0.85
EFNA1-202ENST00000368407 TTC9CQ8N5M4 171 aa20.37■□□□□ 0.85
EFNA1-202ENST00000368407 OR2K2Q8NGT1 345 aa20.37■□□□□ 0.85
EFNA1-202ENST00000368407 FANCD2OSQ96PS1 177 aa20.37■□□□□ 0.85
EFNA1-202ENST00000368407 JMJD8Q96S16 334 aa20.37■□□□□ 0.85
EFNA1-202ENST00000368407 NXT2Q9NPJ8 142 aaKnown RBP20.37■□□□□ 0.85
EFNA1-202ENST00000368407 THYN1Q9P016 225 aa20.37■□□□□ 0.85
EFNA1-202ENST00000368407 Q8N9W7 124 aa20.36■□□□□ 0.85
EFNA1-202ENST00000368407 SMPXQ9UHP9 88 aa20.36■□□□□ 0.85
EFNA1-202ENST00000368407 C5orf64Q2M2E5 130 aa20.35■□□□□ 0.85
EFNA1-202ENST00000368407 NEGR1Q7Z3B1 354 aa20.35■□□□□ 0.85
EFNA1-202ENST00000368407 F8W735 103 aaPredicted RBP20.35■□□□□ 0.85
EFNA1-202ENST00000368407 SNAI2O43623 268 aa20.35■□□□□ 0.85
EFNA1-202ENST00000368407 SMIM17P0DL12 118 aa20.35■□□□□ 0.85
EFNA1-202ENST00000368407 EGR2P11161 476 aaPredicted RBP20.35■□□□□ 0.85
EFNA1-202ENST00000368407 FCER1GP30273 86 aa20.34■□□□□ 0.85
EFNA1-202ENST00000368407 A0A1W2PPM0 123 aa20.33■□□□□ 0.85
EFNA1-202ENST00000368407 VPREB3Q9UKI3 123 aa20.33■□□□□ 0.85
EFNA1-202ENST00000368407 G3V4G9 280 aa20.33■□□□□ 0.84
EFNA1-202ENST00000368407 H3BUT2 72 aa20.33■□□□□ 0.84
EFNA1-202ENST00000368407 SCGB2A2Q13296 93 aa20.33■□□□□ 0.84
EFNA1-202ENST00000368407 TWIST1Q15672 202 aa20.33■□□□□ 0.84
EFNA1-202ENST00000368407 ZNF562Q6V9R5 426 aa20.33■□□□□ 0.84
EFNA1-202ENST00000368407 RNF185Q96GF1 192 aa20.33■□□□□ 0.84
EFNA1-202ENST00000368407 C21orf62Q9NYP8 219 aa20.33■□□□□ 0.84
EFNA1-202ENST00000368407 MOB4Q9Y3A3 225 aa20.33■□□□□ 0.84
EFNA1-202ENST00000368407 C5orf56Q8N8D9 126 aa20.32■□□□□ 0.84
EFNA1-202ENST00000368407 ASCL2Q99929 193 aa20.32■□□□□ 0.84
EFNA1-202ENST00000368407 ESM1Q9NQ30 184 aa20.32■□□□□ 0.84
EFNA1-202ENST00000368407 RBAKDNA6NC62 111 aa20.31■□□□□ 0.84
EFNA1-202ENST00000368407 CRLF1O75462 422 aa20.31■□□□□ 0.84
EFNA1-202ENST00000368407 EVI2AP22794 236 aa20.31■□□□□ 0.84
EFNA1-202ENST00000368407 RAB9AP51151 201 aa20.31■□□□□ 0.84
EFNA1-202ENST00000368407 IGKV2-40A0A087WW87 121 aaPredicted RBP20.3■□□□□ 0.84
EFNA1-202ENST00000368407 TMSB15BA0A087X1C1 80 aa20.3■□□□□ 0.84
EFNA1-202ENST00000368407 DNAJC9-AS1A6NH13 148 aa20.3■□□□□ 0.84
EFNA1-202ENST00000368407 ATP5LO75964 103 aa20.3■□□□□ 0.84
EFNA1-202ENST00000368407 IGKV2D-40P01614 121 aaPredicted RBP20.3■□□□□ 0.84
EFNA1-202ENST00000368407 PRSS47A8MTI9 375 aa20.29■□□□□ 0.84
EFNA1-202ENST00000368407 FABP5P3A8MUU1 101 aa20.29■□□□□ 0.84
EFNA1-202ENST00000368407 ODF1Q14990 250 aa20.29■□□□□ 0.84
EFNA1-202ENST00000368407 KLK9Q2XQG4 91 aa20.29■□□□□ 0.84
EFNA1-202ENST00000368407 ZNF575Q86XF7 245 aa20.29■□□□□ 0.84
EFNA1-202ENST00000368407 ARPC1AQ92747 370 aa20.29■□□□□ 0.84
EFNA1-202ENST00000368407 KLK9Q9UKQ9 250 aa20.29■□□□□ 0.84
EFNA1-202ENST00000368407 TMEM86BQ8N661 226 aa20.27■□□□□ 0.84
EFNA1-202ENST00000368407 SMIM13P0DJ93 91 aa20.27■□□□□ 0.84
EFNA1-202ENST00000368407 FABP2P12104 132 aa20.27■□□□□ 0.84
EFNA1-202ENST00000368407 NMUP48645 174 aa20.27■□□□□ 0.84
EFNA1-202ENST00000368407 ZNF80P51504 273 aaPredicted RBP20.27■□□□□ 0.84
EFNA1-202ENST00000368407 BLCAPP62952 87 aa20.27■□□□□ 0.84
EFNA1-202ENST00000368407 NIPBLQ6KC79 2804 aaeCLIP20.27■□□□□ 0.84
EFNA1-202ENST00000368407 PCP2Q8IVA1 136 aa20.27■□□□□ 0.84
EFNA1-202ENST00000368407 ZNF418Q8TF45 676 aaPredicted RBP20.27■□□□□ 0.84
EFNA1-202ENST00000368407 SPCS1Q9Y6A9 102 aa20.27■□□□□ 0.84
EFNA1-202ENST00000368407 IGHG4P01861 327 aa20.26■□□□□ 0.83
EFNA1-202ENST00000368407 NDPQ00604 133 aa20.26■□□□□ 0.83
EFNA1-202ENST00000368407 DKK2Q9UBU2 259 aa20.26■□□□□ 0.83
EFNA1-202ENST00000368407 HHLA3Q9XRX5 114 aa20.26■□□□□ 0.83
EFNA1-202ENST00000368407 NF1P21359 2839 aa20.26■□□□□ 0.83
EFNA1-202ENST00000368407 IGHV7-81A0A0B4J1V7 117 aa20.25■□□□□ 0.83
EFNA1-202ENST00000368407 Q8N8P6 123 aa20.25■□□□□ 0.83
EFNA1-202ENST00000368407 Q6ZS46 218 aa20.25■□□□□ 0.83
EFNA1-202ENST00000368407 SMAD5-AS1Q9Y6J3 95 aa20.25■□□□□ 0.83
EFNA1-202ENST00000368407 SMKR1H3BMG3 65 aa20.24■□□□□ 0.83
EFNA1-202ENST00000368407 SAP30O75446 220 aa20.24■□□□□ 0.83
EFNA1-202ENST00000368407 TNFRSF6BO95407 300 aa20.24■□□□□ 0.83
EFNA1-202ENST00000368407 HILS1P60008 231 aa20.24■□□□□ 0.83
EFNA1-202ENST00000368407 LINC01548A6NM66 108 aa20.23■□□□□ 0.83
EFNA1-202ENST00000368407 IGKCP01834 107 aa20.23■□□□□ 0.83
EFNA1-202ENST00000368407 TAL2Q16559 108 aa20.23■□□□□ 0.83
EFNA1-202ENST00000368407 VGLL1Q99990 258 aa20.23■□□□□ 0.83
EFNA1-202ENST00000368407 LEPP41159 167 aa20.23■□□□□ 0.83
EFNA1-202ENST00000368407 SLC50A1Q9BRV3 221 aa20.23■□□□□ 0.83
EFNA1-202ENST00000368407 TM2D2Q9BX73 214 aa20.23■□□□□ 0.83
EFNA1-202ENST00000368407 CTSGP08311 255 aa20.22■□□□□ 0.83
EFNA1-202ENST00000368407 SAMD5Q5TGI4 173 aa20.21■□□□□ 0.83
EFNA1-202ENST00000368407 IGLV2-18A0A075B6J9 118 aa20.21■□□□□ 0.83
EFNA1-202ENST00000368407 DPM2O94777 84 aa20.21■□□□□ 0.83
EFNA1-202ENST00000368407 MRPL53Q96EL3 112 aaKnown RBP20.21■□□□□ 0.83
EFNA1-202ENST00000368407 Q8TAT8 98 aa20.2■□□□□ 0.82
EFNA1-202ENST00000368407 CHAC1Q9BUX1 264 aa20.2■□□□□ 0.82
EFNA1-202ENST00000368407 ORM1P02763 201 aa20.19■□□□□ 0.82
EFNA1-202ENST00000368407 FXYD7P58549 80 aa20.19■□□□□ 0.82
EFNA1-202ENST00000368407 ATP6V0E1O15342 81 aa20.18■□□□□ 0.82
EFNA1-202ENST00000368407 IGHV4-4A0A075B6R2 117 aa20.17■□□□□ 0.82
EFNA1-202ENST00000368407 RNASE1P07998 156 aaKnown RBP20.17■□□□□ 0.82
EFNA1-202ENST00000368407 PHLDA1Q8WV24 401 aaPredicted RBP20.17■□□□□ 0.82
EFNA1-202ENST00000368407 S4R3C0 116 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms