RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 GATA1P15976 413 aaPredicted RBP10.09□□□□□ -0.79
PTPRK-207ENST00000368226 SIGMAR1Q99720 223 aa10.09□□□□□ -0.79
PTPRK-207ENST00000368226 NOTCH3Q9UM47 2321 aa10.09□□□□□ -0.79
PTPRK-207ENST00000368226 DEFB1P60022 68 aa10.09□□□□□ -0.79
PTPRK-207ENST00000368226 MORN5Q5VZ52 161 aa10.09□□□□□ -0.79
PTPRK-207ENST00000368226 MRPL35Q9NZE8 188 aaKnown RBP10.09□□□□□ -0.79
PTPRK-207ENST00000368226 KLF5Q13887 457 aaPredicted RBP10.09□□□□□ -0.79
PTPRK-207ENST00000368226 IGLV10-54A0A075B6I4 117 aa10.08□□□□□ -0.8
PTPRK-207ENST00000368226 Q0VG73 95 aa10.08□□□□□ -0.8
PTPRK-207ENST00000368226 SCRT2Q9NQ03 307 aa10.08□□□□□ -0.8
PTPRK-207ENST00000368226 NDUFA12Q9UI09 145 aa10.08□□□□□ -0.8
PTPRK-207ENST00000368226 IGHV3-30P01768 117 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 IGHV3-33P01772 117 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 IGHV3-30-3P0DP02 117 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 IGHV3-30-5P0DP03 117 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 CT83Q5H943 113 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 A8MWP6 167 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 PRR20EP86478 221 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 PRR20CP86479 221 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 PRR20DP86480 221 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 PRR20BP86481 221 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 PRR20AP86496 221 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 SUMO4Q6EEV6 95 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 SMIM2Q9BVW6 85 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 H3BMM0 161 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 LTAP01374 205 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 UBE2WQ96B02 151 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 RPL32P62910 135 aaKnown RBP10.07□□□□□ -0.8
PTPRK-207ENST00000368226 HIST2H2BCQ6DN03 193 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 DYSFO75923 2080 aa10.07□□□□□ -0.8
PTPRK-207ENST00000368226 MED13LQ71F56 2210 aa10.06□□□□□ -0.8
PTPRK-207ENST00000368226 H3BUA1 57 aa10.06□□□□□ -0.8
PTPRK-207ENST00000368226 EREGO14944 169 aa10.06□□□□□ -0.8
PTPRK-207ENST00000368226 ADAMTSL5Q6ZMM2 481 aa10.06□□□□□ -0.8
PTPRK-207ENST00000368226 C9orf66Q5T8R8 295 aa10.06□□□□□ -0.8
PTPRK-207ENST00000368226 Q6ZWC4 215 aa10.06□□□□□ -0.8
PTPRK-207ENST00000368226 DKK2Q9UBU2 259 aa10.06□□□□□ -0.8
PTPRK-207ENST00000368226 FAM231BA6NCW3 169 aa10.06□□□□□ -0.8
PTPRK-207ENST00000368226 RPL39LQ96EH5 51 aaKnown RBP10.06□□□□□ -0.8
PTPRK-207ENST00000368226 C2orf16Q68DN1 1984 aa10.05□□□□□ -0.8
PTPRK-207ENST00000368226 MAJINQ3KP22 176 aa10.05□□□□□ -0.8
PTPRK-207ENST00000368226 C5orf56Q8N8D9 126 aa10.05□□□□□ -0.8
PTPRK-207ENST00000368226 DEFB105AQ8NG35 78 aa10.05□□□□□ -0.8
PTPRK-207ENST00000368226 RHOHQ15669 191 aa10.05□□□□□ -0.8
PTPRK-207ENST00000368226 Q8NA96 180 aa10.05□□□□□ -0.8
PTPRK-207ENST00000368226 MALRD1Q5VYJ5 2156 aa10.05□□□□□ -0.8
PTPRK-207ENST00000368226 K7ERJ3 54 aa10.05□□□□□ -0.8
PTPRK-207ENST00000368226 KMT2EQ8IZD2 1858 aa10.05□□□□□ -0.8
PTPRK-207ENST00000368226 I3L2K1 104 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 K7EIM0 57 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 RPL18AQ02543 176 aaKnown RBP10.04□□□□□ -0.8
PTPRK-207ENST00000368226 GAGE2BQ13066 116 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 Q8N9W7 124 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 C19orf84I3L1E1 186 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 UBE2BP63146 152 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 C5orf38Q86SI9 138 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 NPBQ8NG41 125 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 GTSF1LQ9H1H1 148 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 GYPEP15421 78 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 MSMPQ1L6U9 139 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 Q8N7P7 452 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 KLF2Q9Y5W3 355 aaPredicted RBP10.04□□□□□ -0.8
PTPRK-207ENST00000368226 POU2AF1Q16633 256 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 HIST2H2BDQ6DRA6 164 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 IGF2-ASQ6U949 168 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 MED13Q9UHV7 2174 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 NDUFS6O75380 124 aaKnown RBP10.04□□□□□ -0.8
PTPRK-207ENST00000368226 FAM231DQ6ZW35 169 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 SRCAPQ6ZRS2 3230 aa10.04□□□□□ -0.8
PTPRK-207ENST00000368226 PCNX2A6NKB5 2137 aa10.03□□□□□ -0.8
PTPRK-207ENST00000368226 C8orf31Q8N9H6 132 aa10.03□□□□□ -0.8
PTPRK-207ENST00000368226 KRTAP27-1Q3LI81 207 aa10.03□□□□□ -0.8
PTPRK-207ENST00000368226 PLXNB3Q9ULL4 1909 aa10.03□□□□□ -0.8
PTPRK-207ENST00000368226 DNAJC30Q96LL9 226 aa10.03□□□□□ -0.8
PTPRK-207ENST00000368226 PROP1O75360 226 aa10.02□□□□□ -0.8
PTPRK-207ENST00000368226 CRLF1O75462 422 aa10.02□□□□□ -0.8
PTPRK-207ENST00000368226 CTSGP08311 255 aa10.02□□□□□ -0.8
PTPRK-207ENST00000368226 RMI2Q96E14 147 aa10.02□□□□□ -0.8
PTPRK-207ENST00000368226 MUC6Q6W4X9 2439 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 IGLV11-55A0A075B6I3 123 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 TRBV12-3P01733 135 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 ZFAND6Q6FIF0 208 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 CITED2Q99967 270 aaPredicted RBP10.02□□□□□ -0.81
PTPRK-207ENST00000368226 OVOL2Q9BRP0 275 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 DEFB135Q30KP9 77 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 PRAC2D3DTV9 90 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 E7EUB6 86 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 TAL2Q16559 108 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 MSRB1Q9NZV6 116 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 NCKAP5O14513 1909 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 TRAV12-1A0A0B4J245 112 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 FGF6P10767 208 aa10.02□□□□□ -0.81
PTPRK-207ENST00000368226 DLEU1O43261 78 aa10.01□□□□□ -0.81
PTPRK-207ENST00000368226 CRYGCP07315 174 aa10.01□□□□□ -0.81
PTPRK-207ENST00000368226 PYGO2Q9BRQ0 406 aa10.01□□□□□ -0.81
PTPRK-207ENST00000368226 F8W735 103 aaPredicted RBP10.01□□□□□ -0.81
PTPRK-207ENST00000368226 HERVK_113P63121 156 aa10.01□□□□□ -0.81
PTPRK-207ENST00000368226 IGLL1P15814 213 aa10.01□□□□□ -0.81
PTPRK-207ENST00000368226 TINCRA0A1B0GVN0 87 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms