RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 IL15RAQ13261 267 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 RNASE13Q5GAN3 156 aaKnown RBP5.68□□□□□ -1.5
SPTA1-201ENST00000368147 HIST2H2BDQ6DRA6 164 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 HIVEP2P31629 2446 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 IGKV1-12A0A0C4DH73 117 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 IGKV1D-12P01611 117 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 LINC00114Q6XXX2 140 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 SRRM5B3KS81 715 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 IGKV1-5P01602 117 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 ANGP03950 147 aaKnown RBP5.68□□□□□ -1.5
SPTA1-201ENST00000368147 SUPT4H1P63272 117 aaKnown RBP5.68□□□□□ -1.5
SPTA1-201ENST00000368147 IGHV4-30-2A0A087WSY4 118 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 K7EP34 96 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 GATA3P23771 443 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 CDKN1BP46527 198 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 ZNF138P52744 262 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 HGFACQ04756 655 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 C1orf195Q5TG92 126 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 RNF144BQ7Z419 303 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 MCRIP2Q9BUT9 160 aaKnown RBP5.68□□□□□ -1.5
SPTA1-201ENST00000368147 IGHV4-4A0A075B6R2 117 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 LMO1P25800 156 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 LYZL1Q6UWQ5 148 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 LYL1P12980 280 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 ASPHD1Q5U4P2 390 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 RFNGQ9Y644 331 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 CEND1Q8N111 149 aa5.67□□□□□ -1.5
SPTA1-201ENST00000368147 CFPP27918 469 aa5.67□□□□□ -1.5
SPTA1-201ENST00000368147 B3GALT5-AS1P59052 145 aa5.67□□□□□ -1.5
SPTA1-201ENST00000368147 HS3ST6Q96QI5 342 aa5.67□□□□□ -1.5
SPTA1-201ENST00000368147 FAM236AA0A1B0GUQ0 79 aa5.67□□□□□ -1.5
SPTA1-201ENST00000368147 FAM236BA0A1B0GV22 79 aa5.67□□□□□ -1.5
SPTA1-201ENST00000368147 NXPH4O95158 308 aa5.67□□□□□ -1.5
SPTA1-201ENST00000368147 LINC00473A8K010 186 aa5.67□□□□□ -1.5
SPTA1-201ENST00000368147 IGHV4-38-2P0DP08 117 aa5.67□□□□□ -1.5
SPTA1-201ENST00000368147 HIST3H2BBQ8N257 126 aa5.67□□□□□ -1.5
SPTA1-201ENST00000368147 FAM231BA6NCW3 169 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 IGHV3-30P01768 117 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 IGHV3-33P01772 117 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 IGHV3-30-3P0DP02 117 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 IGHV3-30-5P0DP03 117 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 PRR4Q16378 134 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 NAA38Q9BRA0 125 aaKnown RBP5.66□□□□□ -1.5
SPTA1-201ENST00000368147 TRBV24-1A0A075B6N3 115 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 IGLV3-32A0A0A0MS00 114 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 CENPVL3A0A0U1RRI6 287 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 A0A1B0GUS0 222 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 IGFBP3P17936 291 aaPredicted RBP5.66□□□□□ -1.5
SPTA1-201ENST00000368147 A0A0U1RQV1 116 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 PLA2G2CQ5R387 149 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 TEX36Q5VZQ5 186 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 TINCRA0A1B0GVN0 87 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 SIVA1O15304 175 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 BAALC-AS2P0C853 105 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 CD200R1LQ6Q8B3 271 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 RPP25LQ8N5L8 163 aaKnown RBP5.66□□□□□ -1.5
SPTA1-201ENST00000368147 ZNF492Q9P255 531 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 LINC00271P0C7V0 271 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 LIME1Q9H400 295 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 DOPEY1Q5JWR5 2465 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 COL4A4P53420 1690 aaPredicted RBP5.66□□□□□ -1.5
SPTA1-201ENST00000368147 ZNRF2Q8NHG8 242 aa5.66□□□□□ -1.5
SPTA1-201ENST00000368147 TRAV26-2A0A0B4J265 109 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 hDV102S1A0JD36 115 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 SHISA3A0PJX4 238 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 H0YGX0 51 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 IFI6P09912 130 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 HERVK_113P63121 156 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 CRIPAKQ8N1N5 446 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 ATG2AQ2TAZ0 1938 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 WT1P19544 449 aaPredicted RBP5.65□□□□□ -1.5
SPTA1-201ENST00000368147 RNF126Q9BV68 326 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 LY6G6EA0A0G2JKS1 128 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 NDUFB8O95169 186 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 ZC2HC1BQ5TFG8 222 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 LYPD1Q8N2G4 141 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 GFRA4Q9GZZ7 299 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 U3KQA8 63 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 COL5A1P20908 1838 aaPredicted RBP5.65□□□□□ -1.5
SPTA1-201ENST00000368147 IGLL5B9A064 214 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 DIAPH2-AS1Q14236 149 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 MPLKIPQ8TAP9 179 aa5.65□□□□□ -1.5
SPTA1-201ENST00000368147 LRCOL1A6NCL2 159 aa5.65□□□□□ -1.51
SPTA1-201ENST00000368147 BUB3O43684 328 aa5.65□□□□□ -1.51
SPTA1-201ENST00000368147 HERV-K104P63124 156 aa5.65□□□□□ -1.51
SPTA1-201ENST00000368147 I3L3M4 83 aa5.65□□□□□ -1.51
SPTA1-201ENST00000368147 C9orf66Q5T8R8 295 aa5.65□□□□□ -1.51
SPTA1-201ENST00000368147 OCC1Q8TAD7 63 aa5.65□□□□□ -1.51
SPTA1-201ENST00000368147 CFHR4Q92496 578 aa5.65□□□□□ -1.51
SPTA1-201ENST00000368147 FBLIM1Q8WUP2 373 aa5.65□□□□□ -1.51
SPTA1-201ENST00000368147 WFDC1Q9HC57 220 aa5.65□□□□□ -1.51
SPTA1-201ENST00000368147 Q6P435 159 aa5.64□□□□□ -1.51
SPTA1-201ENST00000368147 SMIM27A0A1W2PRY6 76 aa5.64□□□□□ -1.51
SPTA1-201ENST00000368147 TMEM256-PLSCR3K7ERE1 68 aa5.64□□□□□ -1.51
SPTA1-201ENST00000368147 GP9P14770 177 aa5.64□□□□□ -1.51
SPTA1-201ENST00000368147 Q6ZVH6 145 aa5.64□□□□□ -1.51
SPTA1-201ENST00000368147 TEN1Q86WV5 123 aa5.64□□□□□ -1.51
SPTA1-201ENST00000368147 TPSG1Q9NRR2 321 aa5.64□□□□□ -1.51
SPTA1-201ENST00000368147 ETDCA0A1B0GVM5 59 aa5.64□□□□□ -1.51
SPTA1-201ENST00000368147 J3QLI3 93 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms