RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 UNQ9165/PRO28630Q6UXU0 137 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 C10orf105Q8TEF2 133 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 LINC00527Q9UJ94 153 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 IGHV4-61A0A0C4DH41 118 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 A0A0G2JLM5 398 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 SAMD13Q5VXD3 122 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 BRD3OSQ6XYD6 125 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 DPH3P1Q9H4G8 78 aa10.85□□□□□ -0.67
CD48-201ENST00000368045 IGKV2D-26A0A0A0MRZ7 120 aa10.84□□□□□ -0.67
CD48-201ENST00000368045 TRAV26-2A0A0B4J265 109 aa10.84□□□□□ -0.67
CD48-201ENST00000368045 GAGE12BA1L429 117 aa10.84□□□□□ -0.67
CD48-201ENST00000368045 K7EP34 96 aa10.84□□□□□ -0.67
CD48-201ENST00000368045 PPP1R17O96001 155 aa10.84□□□□□ -0.67
CD48-201ENST00000368045 TRBV12-3P01733 135 aa10.84□□□□□ -0.67
CD48-201ENST00000368045 GNLYP22749 145 aa10.84□□□□□ -0.67
CD48-201ENST00000368045 TCTAP57738 103 aa10.84□□□□□ -0.67
CD48-201ENST00000368045 OCIAD2Q56VL3 154 aa10.84□□□□□ -0.67
CD48-201ENST00000368045 ZC2HC1BQ5TFG8 222 aa10.84□□□□□ -0.67
CD48-201ENST00000368045 NBASA2RRP1 2371 aa10.84□□□□□ -0.67
CD48-201ENST00000368045 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.83□□□□□ -0.68
CD48-201ENST00000368045 S100A4P26447 101 aaKnown RBP10.83□□□□□ -0.68
CD48-201ENST00000368045 CHAC1Q9BUX1 264 aa10.83□□□□□ -0.68
CD48-201ENST00000368045 MRPL35Q9NZE8 188 aaKnown RBP10.83□□□□□ -0.68
CD48-201ENST00000368045 ZNF580Q9UK33 172 aa10.83□□□□□ -0.68
CD48-201ENST00000368045 H3BUT2 72 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 SMIM13P0DJ93 91 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 CLEC2AQ6UVW9 174 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 Q6ZQT7 251 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 ATRXP46100 2492 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 H7C1H1 209 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 IGLV1-40P01703 118 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 SUMO2P61956 95 aaKnown RBP10.82□□□□□ -0.68
CD48-201ENST00000368045 TAL2Q16559 108 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 GTSCR1Q86UQ5 136 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 OR5A1Q8NGJ0 315 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 TOMM6Q96B49 74 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 JMJD8Q96S16 334 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 CCL19Q99731 98 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 TMEM160Q9NX00 188 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 PHLDA3Q9Y5J5 127 aa10.82□□□□□ -0.68
CD48-201ENST00000368045 TRBV25-1A0A075B6N4 114 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 A0A1W2PPM0 123 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 H3BUX3 64 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 K7EMT4 169 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 K7ERU9 68 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 NXPH4O95158 308 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 IGHV4-38-2P0DP08 117 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 PF4V1P10720 104 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 PCP4P48539 62 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 ANXA2RQ3ZCQ2 193 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 POM121L12Q8N7R1 296 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 RASL10AQ92737 203 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 TM2D2Q9BX73 214 aa10.81□□□□□ -0.68
CD48-201ENST00000368045 DAZ1Q9NQZ3 744 aaKnown RBP10.81□□□□□ -0.68
CD48-201ENST00000368045 LY6EQ16553 131 aa10.8□□□□□ -0.68
CD48-201ENST00000368045 RHPN1-AS1Q9BWJ2 59 aa10.8□□□□□ -0.68
CD48-201ENST00000368045 DCHS1Q96JQ0 3298 aa10.8□□□□□ -0.68
CD48-201ENST00000368045 F8VRH5 84 aa10.8□□□□□ -0.68
CD48-201ENST00000368045 MSMBP08118 114 aa10.8□□□□□ -0.68
CD48-201ENST00000368045 FABP2P12104 132 aa10.8□□□□□ -0.68
CD48-201ENST00000368045 GCSHP23434 173 aa10.8□□□□□ -0.68
CD48-201ENST00000368045 SPOCK3Q9BQ16 436 aa10.8□□□□□ -0.68
CD48-201ENST00000368045 HIVEP3Q5T1R4 2406 aa10.79□□□□□ -0.68
CD48-201ENST00000368045 LINC01549A6NIU2 74 aa10.79□□□□□ -0.68
CD48-201ENST00000368045 LINC01619G3V211 115 aa10.79□□□□□ -0.68
CD48-201ENST00000368045 IGHV3-11P01762 117 aa10.79□□□□□ -0.68
CD48-201ENST00000368045 RNASE4P34096 147 aaKnown RBP10.79□□□□□ -0.68
CD48-201ENST00000368045 ID1P41134 155 aa10.79□□□□□ -0.68
CD48-201ENST00000368045 RPL32P62910 135 aaKnown RBP10.79□□□□□ -0.68
CD48-201ENST00000368045 RPL11P62913 178 aaKnown RBP10.79□□□□□ -0.68
CD48-201ENST00000368045 CFHR3Q02985 330 aa10.79□□□□□ -0.68
CD48-201ENST00000368045 SCGB3A1Q96QR1 104 aa10.79□□□□□ -0.68
CD48-201ENST00000368045 KLK15Q9H2R5 256 aa10.79□□□□□ -0.68
CD48-201ENST00000368045 MED13LQ71F56 2210 aa10.79□□□□□ -0.68
CD48-201ENST00000368045 SPTBN1Q01082 2364 aaKnown RBP10.78□□□□□ -0.68
CD48-201ENST00000368045 J3KRW8 73 aa10.78□□□□□ -0.68
CD48-201ENST00000368045 FXYD2P54710 66 aa10.78□□□□□ -0.68
CD48-201ENST00000368045 CEND1Q8N111 149 aa10.78□□□□□ -0.68
CD48-201ENST00000368045 RNF151Q2KHN1 245 aa10.77□□□□□ -0.68
CD48-201ENST00000368045 C14orf178Q8N769 122 aaPredicted RBP10.77□□□□□ -0.68
CD48-201ENST00000368045 COL6A6A6NMZ7 2263 aa10.77□□□□□ -0.69
CD48-201ENST00000368045 KLLNB2CW77 178 aa10.77□□□□□ -0.69
CD48-201ENST00000368045 RNASE3P12724 160 aaKnown RBP10.77□□□□□ -0.69
CD48-201ENST00000368045 GATA3P23771 443 aa10.77□□□□□ -0.69
CD48-201ENST00000368045 ATP5J2P56134 94 aa10.77□□□□□ -0.69
CD48-201ENST00000368045 TM4SF20Q53R12 229 aa10.77□□□□□ -0.69
CD48-201ENST00000368045 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
CD48-201ENST00000368045 NEXN-AS1Q8NBZ9 246 aa10.77□□□□□ -0.69
CD48-201ENST00000368045 RAB37Q96AX2 223 aa10.77□□□□□ -0.69
CD48-201ENST00000368045 TTTY13Q9BZ97 58 aa10.77□□□□□ -0.69
CD48-201ENST00000368045 CHTOPQ9Y3Y2 248 aaKnown RBP10.77□□□□□ -0.69
CD48-201ENST00000368045 SPCS1Q9Y6A9 102 aa10.77□□□□□ -0.69
CD48-201ENST00000368045 IGHV4OR15-8A0A075B7B6 117 aa10.76□□□□□ -0.69
CD48-201ENST00000368045 A0A087WW49 117 aa10.76□□□□□ -0.69
CD48-201ENST00000368045 MGPP08493 103 aa10.76□□□□□ -0.69
CD48-201ENST00000368045 BLCAPP62952 87 aa10.76□□□□□ -0.69
CD48-201ENST00000368045 IGHV4-30-2A0A087WSY4 118 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 TMEM89A2RUT3 159 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 RNF223E7ERA6 249 aa10.75□□□□□ -0.69
CD48-201ENST00000368045 C2orf66Q6UXQ4 117 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms