RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TCRAP04437 139 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 OR5AL1P0C617 328 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 HOXD3P31249 432 aaPredicted RBP9.17□□□□□ -0.94
USF1-203ENST00000368021 TM4SF20Q53R12 229 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 FAM110AQ9BQ89 295 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 SLC50A1Q9BRV3 221 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 ZNF331Q9NQX6 463 aaPredicted RBP9.17□□□□□ -0.94
USF1-203ENST00000368021 MRPL16Q9NX20 251 aaKnown RBP9.17□□□□□ -0.94
USF1-203ENST00000368021 IGHV3-49A0A0A0MS15 119 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 GRIFINA4D1Z8 144 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 ZNF785A8K8V0 405 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 SNURFLB1AK76 121 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 LINC01619G3V211 115 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 KLF5Q13887 457 aaPredicted RBP9.17□□□□□ -0.94
USF1-203ENST00000368021 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 FOXI2Q6ZQN5 318 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 C11orf44Q8N8P7 122 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 OR2K2Q8NGT1 345 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 IGF2BP2-AS1Q96M15 143 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 SPXQ9BT56 116 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 RHPN1-AS1Q9BWJ2 59 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 PKD1L1Q8TDX9 2849 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 TMEM213A2RRL7 107 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 C7orf71A4D174 169 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 CHEK1O14757 476 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 PROK1P58294 105 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 GNG5P63218 68 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 MPV17L2Q567V2 206 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 CENPWQ5EE01 88 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 KHDC1LQ5JSQ8 128 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 C18orf65Q6ZTR6 163 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 KLHL30-AS1Q8NEE0 82 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 FMC1Q96HJ9 113 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 TMEM70Q9BUB7 260 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 SIGLEC8Q9NYZ4 499 aa9.16□□□□□ -0.94
USF1-203ENST00000368021 VWFP04275 2813 aa9.15□□□□□ -0.94
USF1-203ENST00000368021 A0A1B0GUS0 222 aa9.15□□□□□ -0.94
USF1-203ENST00000368021 K7EQM0 130 aa9.15□□□□□ -0.94
USF1-203ENST00000368021 SIVA1O15304 175 aa9.15□□□□□ -0.94
USF1-203ENST00000368021 HSBP1O75506 76 aa9.15□□□□□ -0.94
USF1-203ENST00000368021 SYNJ2BPP57105 145 aa9.15□□□□□ -0.94
USF1-203ENST00000368021 KRTAP10-3P60369 221 aa9.15□□□□□ -0.94
USF1-203ENST00000368021 OCC1Q8TAD7 63 aa9.15□□□□□ -0.94
USF1-203ENST00000368021 RAX2Q96IS3 184 aa9.15□□□□□ -0.94
USF1-203ENST00000368021 TSSC4Q9Y5U2 329 aaPredicted RBP9.15□□□□□ -0.94
USF1-203ENST00000368021 TRAV26-1A0A087WT03 109 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 TRBV6-1A0A0K0K1D8 114 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 ISLRO14498 428 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 CD28P10747 220 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 IGLL1P15814 213 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 CSN1S1P47710 185 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 RPL24P83731 157 aaKnown RBP9.15□□□□□ -0.95
USF1-203ENST00000368021 DEFB136Q30KP8 78 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 C8orf86Q6ZUL3 223 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 C18orf32Q8TCD1 76 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 LINC00479Q96M42 142 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 ZNF747Q9BV97 191 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 NAT8BQ9UHF3 227 aa9.15□□□□□ -0.95
USF1-203ENST00000368021 GAGE12HA6NDE8 117 aa9.14□□□□□ -0.95
USF1-203ENST00000368021 PGPEP1LA6NFU8 196 aa9.14□□□□□ -0.95
USF1-203ENST00000368021 M0R3E3 92 aa9.14□□□□□ -0.95
USF1-203ENST00000368021 TMEM75Q8N9X5 138 aa9.14□□□□□ -0.95
USF1-203ENST00000368021 GEMIN7Q9H840 131 aaKnown RBP9.14□□□□□ -0.95
USF1-203ENST00000368021 FBLL1A6NHQ2 334 aaKnown RBP9.13□□□□□ -0.95
USF1-203ENST00000368021 SAP30O75446 220 aa9.13□□□□□ -0.95
USF1-203ENST00000368021 LTAP01374 205 aa9.13□□□□□ -0.95
USF1-203ENST00000368021 IGLV2-8P01709 118 aa9.13□□□□□ -0.95
USF1-203ENST00000368021 TCL1AP56279 114 aa9.13□□□□□ -0.95
USF1-203ENST00000368021 FHL3Q13643 280 aa9.13□□□□□ -0.95
USF1-203ENST00000368021 GOLT1AQ6ZVE7 132 aa9.13□□□□□ -0.95
USF1-203ENST00000368021 TSKUQ8WUA8 353 aa9.13□□□□□ -0.95
USF1-203ENST00000368021 MRPL53Q96EL3 112 aaKnown RBP9.13□□□□□ -0.95
USF1-203ENST00000368021 C2orf70A6NJV1 201 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 F8W1H4 67 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 K7EN84 100 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 IGLV2-11P01706 119 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 FABP2P12104 132 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 CBLN1P23435 193 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 SLURP1P55000 103 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 SHISA2Q6UWI4 295 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 OR9G4Q8NGQ1 327 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 CHCHD1Q96BP2 118 aaKnown RBP9.12□□□□□ -0.95
USF1-203ENST00000368021 OSTCQ9NRP0 149 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 PEMTQ9UBM1 199 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 TRAV8-2A0A0B4J237 113 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 MUC21A0A0G2JKD1 596 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 MUC21A0A140T8X8 626 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 SOCS3O14543 225 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 MUC21Q5SSG8 566 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 LCN12Q6JVE5 192 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 ERASQ7Z444 233 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 OR10AG1Q8NH19 301 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 MLST8Q9BVC4 326 aa9.12□□□□□ -0.95
USF1-203ENST00000368021 TRAV8-6A0A0B4J262 113 aa9.11□□□□□ -0.95
USF1-203ENST00000368021 TMEM97Q5BJF2 176 aa9.11□□□□□ -0.95
USF1-203ENST00000368021 Q86TA4 180 aa9.11□□□□□ -0.95
USF1-203ENST00000368021 C16orf92Q96LL3 132 aa9.11□□□□□ -0.95
USF1-203ENST00000368021 TRAV8-1A0A0A6YYK1 113 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 RBAKDNA6NC62 111 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms