RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 UBE2CO00762 179 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 PLEKHB2Q96CS7 222 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 I3L2K1 104 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 PAX2Q02962 417 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 FOXI2Q6ZQN5 318 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 AGPAT4-IT1Q9H0P7 198 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 C22orf34Q6ZV56 151 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 CTSGP08311 255 aa9.05□□□□□ -0.96
SYNE1-204ENST00000367248 SPAG8Q99932 426 aaPredicted RBP9.05□□□□□ -0.96
SYNE1-204ENST00000367248 NHP2Q9NX24 153 aaKnown RBP9.05□□□□□ -0.96
SYNE1-204ENST00000367248 LMO4P61968 165 aa9.05□□□□□ -0.96
SYNE1-204ENST00000367248 LY6G5BQ8NDX9 201 aa9.05□□□□□ -0.96
SYNE1-204ENST00000367248 IGHV3-30P01768 117 aa9.05□□□□□ -0.96
SYNE1-204ENST00000367248 IGHV3-33P01772 117 aa9.05□□□□□ -0.96
SYNE1-204ENST00000367248 IGHV3-30-3P0DP02 117 aa9.05□□□□□ -0.96
SYNE1-204ENST00000367248 IGHV3-30-5P0DP03 117 aa9.05□□□□□ -0.96
SYNE1-204ENST00000367248 RNASE13Q5GAN3 156 aaKnown RBP9.05□□□□□ -0.96
SYNE1-204ENST00000367248 SMR3AQ99954 134 aa9.05□□□□□ -0.96
SYNE1-204ENST00000367248 LOXL1Q08397 574 aaPredicted RBP9.05□□□□□ -0.96
SYNE1-204ENST00000367248 H3BMM0 161 aa9.05□□□□□ -0.96
SYNE1-204ENST00000367248 UBE2WQ96B02 151 aa9.05□□□□□ -0.96
SYNE1-204ENST00000367248 PRRC2AP48634 2157 aaKnown RBP9.05□□□□□ -0.96
SYNE1-204ENST00000367248 C3orf79P0CE67 100 aa9.04□□□□□ -0.96
SYNE1-204ENST00000367248 PRIMA1Q86XR5 153 aa9.04□□□□□ -0.96
SYNE1-204ENST00000367248 C17orf77Q96MU5 243 aa9.04□□□□□ -0.96
SYNE1-204ENST00000367248 C5orf56Q8N8D9 126 aa9.04□□□□□ -0.96
SYNE1-204ENST00000367248 U3KQE9 123 aa9.04□□□□□ -0.96
SYNE1-204ENST00000367248 CCL18P55774 89 aa9.04□□□□□ -0.96
SYNE1-204ENST00000367248 LRRC75A-AS1Q8N1F1 130 aa9.04□□□□□ -0.96
SYNE1-204ENST00000367248 SDHAF1A6NFY7 115 aa9.04□□□□□ -0.96
SYNE1-204ENST00000367248 PRB2P02812 416 aaPredicted RBP9.04□□□□□ -0.96
SYNE1-204ENST00000367248 ZC2HC1BQ5TFG8 222 aa9.04□□□□□ -0.96
SYNE1-204ENST00000367248 NDUFAF3Q9BU61 184 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 LINC00587B1AMM8 73 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 C2orf66Q6UXQ4 117 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 C5orf30Q96GV9 206 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 TMEM238C9JI98 176 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 GHRHP01286 108 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 SORL1Q92673 2214 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 NKAPP1Q8N9T2 125 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 ZC2HC1AQ96GY0 325 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 F8WEM9 126 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 IGHV4-31P0DP07 118 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 MRPL53Q96EL3 112 aaKnown RBP9.03□□□□□ -0.96
SYNE1-204ENST00000367248 SPCS1Q9Y6A9 102 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 PROP1O75360 226 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 UBE2BP63146 152 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 V9GYV3 84 aa9.03□□□□□ -0.96
SYNE1-204ENST00000367248 LENEPQ9Y5L5 61 aa9.02□□□□□ -0.96
SYNE1-204ENST00000367248 IGHG2P01859 326 aa9.02□□□□□ -0.97
SYNE1-204ENST00000367248 RMI2Q96E14 147 aa9.02□□□□□ -0.97
SYNE1-204ENST00000367248 DYNAPQ8N1N2 210 aa9.02□□□□□ -0.97
SYNE1-204ENST00000367248 WIPF2Q8TF74 440 aaPredicted RBP9.02□□□□□ -0.97
SYNE1-204ENST00000367248 TMEM243Q9BU79 118 aa9.02□□□□□ -0.97
SYNE1-204ENST00000367248 GNRH2O43555 120 aa9.02□□□□□ -0.97
SYNE1-204ENST00000367248 CRLF1O75462 422 aa9.02□□□□□ -0.97
SYNE1-204ENST00000367248 IGLV10-54A0A075B6I4 117 aa9.02□□□□□ -0.97
SYNE1-204ENST00000367248 LAMTOR3Q9UHA4 124 aa9.02□□□□□ -0.97
SYNE1-204ENST00000367248 A0A1B0GWB2 263 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 H3BUT2 72 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 PRSS57Q6UWY2 283 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 A8MWP6 167 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 SPART-AS1P0CW21 52 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 C18orf32Q8TCD1 76 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 SYS1-DBNDD2H3BUS1 97 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 ODF3L1Q8IXM7 274 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 TP53TG1Q9Y2A0 90 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 CRYGCP07315 174 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 XCL1P47992 114 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 Q0VG73 95 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 ORAOV1Q8WV07 137 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 TEX22C9J3V5 150 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 HSD52Q0P140 79 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 Q8N8P6 123 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 FREM1Q5H8C1 2179 aa9.01□□□□□ -0.97
SYNE1-204ENST00000367248 TMEM89A2RUT3 159 aa9□□□□□ -0.97
SYNE1-204ENST00000367248 PRSS29PA6NIE9 313 aa9□□□□□ -0.97
SYNE1-204ENST00000367248 TNFRSF13BO14836 293 aaPredicted RBP9□□□□□ -0.97
SYNE1-204ENST00000367248 DEFB125Q8N687 156 aa9□□□□□ -0.97
SYNE1-204ENST00000367248 JMJD1CQ15652 2540 aa9□□□□□ -0.97
SYNE1-204ENST00000367248 PATE2Q6UY27 113 aa9□□□□□ -0.97
SYNE1-204ENST00000367248 FAM110AQ9BQ89 295 aa9□□□□□ -0.97
SYNE1-204ENST00000367248 I3L3M4 83 aa9□□□□□ -0.97
SYNE1-204ENST00000367248 LTAP01374 205 aa9□□□□□ -0.97
SYNE1-204ENST00000367248 A0A1B0GV90 55 aa9□□□□□ -0.97
SYNE1-204ENST00000367248 IGLL1P15814 213 aa9□□□□□ -0.97
SYNE1-204ENST00000367248 LOC105371267A0A1B0GV96 52 aa8.99□□□□□ -0.97
SYNE1-204ENST00000367248 DEFB1P60022 68 aa8.99□□□□□ -0.97
SYNE1-204ENST00000367248 TIMM21Q9BVV7 248 aa8.99□□□□□ -0.97
SYNE1-204ENST00000367248 KLK5Q9Y337 293 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-204ENST00000367248 A6NDX4 124 aa8.99□□□□□ -0.97
SYNE1-204ENST00000367248 PYGO2Q9BRQ0 406 aa8.99□□□□□ -0.97
SYNE1-204ENST00000367248 MYMXA0A1B0GTQ4 84 aa8.99□□□□□ -0.97
SYNE1-204ENST00000367248 BUB3O43684 328 aa8.99□□□□□ -0.97
SYNE1-204ENST00000367248 GYPEP15421 78 aa8.99□□□□□ -0.97
SYNE1-204ENST00000367248 RBAKDNA6NC62 111 aa8.99□□□□□ -0.97
SYNE1-204ENST00000367248 MRPL51Q4U2R6 128 aaKnown RBP8.99□□□□□ -0.97
SYNE1-204ENST00000367248 M0R2P5 195 aa8.98□□□□□ -0.97
SYNE1-204ENST00000367248 MYCNOSP40205 109 aa8.98□□□□□ -0.97
SYNE1-204ENST00000367248 PMVKQ15126 192 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms