RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 APCP25054 2843 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 SMAGPQ0VAQ4 97 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 LINC01559Q495D7 138 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 ZNF575Q86XF7 245 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 ANKRD17O75179 2603 aaKnown RBP11.33□□□□□ -0.6
PRKN-204ENST00000366896 PRSS1P07477 247 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 PIMREGQ9BSJ6 248 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 NXT2Q9NPJ8 142 aaKnown RBP11.33□□□□□ -0.6
PRKN-204ENST00000366896 CSMD2Q7Z408 3487 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 IGHV7-81A0A0B4J1V7 117 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 IGLL5B9A064 214 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 WFDC2Q14508 124 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 GTSCR1Q86UQ5 136 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 LRRC75A-AS1Q8N1F1 130 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 SPATA25Q9BR10 227 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 J3QR89 54 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 DPM2O94777 84 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 GAS8-AS1O95177 125 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 FAM110DQ8TAY7 271 aaPredicted RBP11.32□□□□□ -0.6
PRKN-204ENST00000366896 MSRB1Q9NZV6 116 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 IGHV4-30-2A0A087WSY4 118 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 FABP5P3A8MUU1 101 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 ATP5LO75964 103 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 TNFRSF6BO95407 300 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 DSCR9P59020 149 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 ZC2HC1BQ5TFG8 222 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 ZFP36P26651 326 aaKnown RBP11.31□□□□□ -0.6
PRKN-204ENST00000366896 Q8N9W7 124 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 FOXC2Q99958 501 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 TAL2Q16559 108 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 ZNF502Q8TBZ5 544 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 ZNF479Q96JC4 524 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 HECTD1Q9ULT8 2610 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 UNC79Q9P2D8 2635 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 ZNF207O43670 478 aaKnown RBP11.3□□□□□ -0.6
PRKN-204ENST00000366896 LMO4P61968 165 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 NAV2Q8IVL1 2488 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 A0A1B0GV72 72 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 ERCC8Q13216 396 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 TMEM158Q8WZ71 300 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 SIRPDQ9H106 197 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 ZFAND3Q9H8U3 227 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 IGHV4-61A0A0C4DH41 118 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 PRAC2D3DTV9 90 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 K7EMI3 77 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 BUB3O43684 328 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 MRPL53Q96EL3 112 aaKnown RBP11.29□□□□□ -0.6
PRKN-204ENST00000366896 ATP6V0BQ99437 205 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 SPAG8Q99932 426 aaPredicted RBP11.29□□□□□ -0.6
PRKN-204ENST00000366896 C12orf74Q32Q52 190 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 AGRNO00468 2067 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 IGLV2-18A0A075B6J9 118 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 H3BMG7 143 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 RNF182Q8N6D2 247 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 MAPKAPK5-AS1Q8N8E1 139 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 Q8N8P6 123 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 TRAV40A0A0B4J280 105 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 IGHV3-66A0A0C4DH42 116 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 SLC25A16P16260 332 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 ECSCRQ19T08 205 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 ETDBQ3ZM63 59 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 Q5PR19 223 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 SH2D6Q7Z4S9 175 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 HIF1ANQ9NWT6 349 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 ORM1P02763 201 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 GATA1P15976 413 aaPredicted RBP11.27□□□□□ -0.61
PRKN-204ENST00000366896 UBE2E1P51965 193 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 C15orf32Q32M92 178 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 KRTAP1-3Q8IUG1 177 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 TMEM160Q9NX00 188 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 MRPL35Q9NZE8 188 aaKnown RBP11.27□□□□□ -0.61
PRKN-204ENST00000366896 VPS13CQ709C8 3753 aa11.26□□□□□ -0.61
PRKN-204ENST00000366896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
PRKN-204ENST00000366896 PRO0461Q9UI25 63 aa11.26□□□□□ -0.61
PRKN-204ENST00000366896 PRSS47A8MTI9 375 aa11.26□□□□□ -0.61
PRKN-204ENST00000366896 WNK2Q9Y3S1 2297 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 PPIFP30405 207 aaKnown RBP11.25□□□□□ -0.61
PRKN-204ENST00000366896 GAGE13Q4V321 117 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 MED13LQ71F56 2210 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 IGHV3OR16-13A0A075B7E8 117 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 A0A096LNT2 108 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 IGHV3-74A0A0B4J1X5 117 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.25□□□□□ -0.61
PRKN-204ENST00000366896 ATP6V0E1O15342 81 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 IL17RELQ6ZVW7 336 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 AJUBAQ96IF1 538 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 CLPSL1A2RUU4 121 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 CLEC3BP05452 202 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 PDZD2O15018 2839 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 ABCA2Q9BZC7 2435 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 TRBV7-3A0A075B6L6 115 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 A0A1B0GWB2 263 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 ITPR2Q14571 2701 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 A0A087WX48 190 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 LINC01548A6NM66 108 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 MYOZ3Q8TDC0 251 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 CCDC140Q96MF4 163 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms