RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 LINC00208Q96KT6 92 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 NABP2Q9BQ15 211 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 LXNQ9BS40 222 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 PCBD2Q9H0N5 130 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 MRPL36Q9P0J6 103 aaKnown RBP0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 MPC1Q9Y5U8 109 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 ABCA4P78363 2273 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 HRNRQ86YZ3 2850 aaPredicted RBP0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 COL12A1Q99715 3063 aa0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 EPPK1P58107 5090 aaKnown RBP0.07□□□□□ -2.4
RNU4-48P-201ENST00000365559 CASZ1Q86V15 1759 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 POLQO75417 2590 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 RNF213Q63HN8 5207 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 AHCTF1Q8WYP5 2266 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 CELSR2Q9HCU4 2923 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 JMJD1CQ15652 2540 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 A2MP01023 1474 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 TRBV27A0A0K0K1C4 114 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 NBDYA0A0U1RRE5 68 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 LOC107984640A0A0U1RRK4 108 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 LOC101927531A0A1B0GV80 90 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 TMEM189A5PLL7 270 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 IFITM5A6NNB3 132 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 E7EQ34 232 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 TPST1O60507 370 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 CRYGSP22914 178 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 ETV6P41212 452 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 RPL37P61927 97 aaKnown RBP0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 LSM3P62310 102 aaKnown RBP0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 IQCJQ1A5X6 159 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 CCSMST1Q4G0I0 132 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 HRCT1Q6UXD1 115 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 MORN4Q8NDC4 146 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 SMIM7Q9BQ49 75 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 COMMD3Q9UBI1 195 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 ATPIF1Q9UII2 106 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 TRAPPC2LQ9UL33 140 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 MED31Q9Y3C7 131 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 ABCA12Q86UK0 2595 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 CHD8Q9HCK8 2581 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 SONP18583 2426 aaKnown RBP0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 ASXL3Q9C0F0 2248 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 PTPN13Q12923 2485 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 PHIPQ8WWQ0 1821 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 DOCK11Q5JSL3 2073 aa0.06□□□□□ -2.4
RNU4-48P-201ENST00000365559 RYR3Q15413 4870 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 F8P00451 2351 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 BLMP54132 1417 aaPredicted RBP0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 HMCN2Q8NDA2 5059 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 HYDINQ4G0P3 5121 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 ZCCHC6Q5VYS8 1495 aaKnown RBP0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 A0A0G2JMM0 328 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 TRBV7-6A0A0J9YX20 115 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 A0A1B0GV72 72 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 A0A1W2PRE2 83 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 HIGD1CA8MV81 97 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 H3BMG7 143 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 M0QZK8 103 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 IGKCP01834 107 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 HBDP02042 147 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 SLC25A4P12235 298 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 CKS2P33552 79 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 POLR2HP52434 150 aaKnown RBP0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 BLCAPP62952 87 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 UNQ5815/PRO19632Q6UWF5 114 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 LYPD5Q6UWN5 251 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 IDO2Q6ZQW0 420 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 BRK1Q8WUW1 75 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 THEM6Q8WUY1 208 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 DMAC1Q96GE9 116 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 ATG5Q9H1Y0 275 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 C19orf12Q9NSK7 152 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 CBLN4Q9NTU7 201 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 STAB1Q9NY15 2570 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 CHD9Q3L8U1 2897 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 COL7A1Q02388 2944 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 MUC12Q9UKN1 5478 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 USH2AO75445 5202 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 UBR5O95071 2799 aaPredicted RBP0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 CADP27708 2225 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 PIEZO1Q92508 2521 aa0.05□□□□□ -2.4
RNU4-48P-201ENST00000365559 NRXN2Q9P2S2 1712 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 CELSR1Q9NYQ6 3014 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 CREBBPQ92793 2442 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 LAMC3Q9Y6N6 1575 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 IGHV1-24A0A0C4DH33 117 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 FABP1P07148 127 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 RPL7P18124 248 aaKnown RBP0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 ADCYAP1P18509 176 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 POLR2JP52435 117 aaKnown RBP0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 PCBD1P61457 104 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 KLKP1Q107X0 134 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 RHOHQ15669 191 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 ASB16-AS1Q495Z4 193 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 SAMD13Q5VXD3 122 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 DEFB132Q7Z7B7 95 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 OR5A2Q8NGI9 324 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 OTOSQ8NHW6 89 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 DSCR8Q96T75 97 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms