RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 BOKQ9UMX3 212 aaPredicted RBP1.18□□□□□ -2.22
RPL39-201ENST00000361575 ATG2AQ2TAZ0 1938 aa1.18□□□□□ -2.22
RPL39-201ENST00000361575 MYH13Q9UKX3 1938 aa1.18□□□□□ -2.22
RPL39-201ENST00000361575 ASH1LQ9NR48 2969 aaKnown RBP1.18□□□□□ -2.22
RPL39-201ENST00000361575 LRP5O75197 1615 aa1.18□□□□□ -2.22
RPL39-201ENST00000361575 LYPD5Q6UWN5 251 aa1.17□□□□□ -2.22
RPL39-201ENST00000361575 C3orf62Q6ZUJ4 267 aa1.17□□□□□ -2.22
RPL39-201ENST00000361575 PNMA8CA0A1B0GUJ8 204 aa1.16□□□□□ -2.22
RPL39-201ENST00000361575 SMIM24O75264 130 aa1.16□□□□□ -2.22
RPL39-201ENST00000361575 IGF2P01344 180 aa1.16□□□□□ -2.22
RPL39-201ENST00000361575 KDELR1P24390 212 aa1.16□□□□□ -2.22
RPL39-201ENST00000361575 GLYATL3Q5SZD4 288 aa1.16□□□□□ -2.22
RPL39-201ENST00000361575 OR8J3Q8NGG0 315 aa1.16□□□□□ -2.22
RPL39-201ENST00000361575 SLC35B3Q9H1N7 401 aa1.16□□□□□ -2.22
RPL39-201ENST00000361575 CASZ1Q86V15 1759 aa1.16□□□□□ -2.22
RPL39-201ENST00000361575 GYPBP06028 91 aa1.15□□□□□ -2.23
RPL39-201ENST00000361575 IGLC6P0CF74 106 aa1.15□□□□□ -2.23
RPL39-201ENST00000361575 IL7P13232 177 aa1.15□□□□□ -2.23
RPL39-201ENST00000361575 ADCYAP1P18509 176 aa1.15□□□□□ -2.23
RPL39-201ENST00000361575 RHOHQ15669 191 aa1.15□□□□□ -2.23
RPL39-201ENST00000361575 IDO2Q6ZQW0 420 aa1.15□□□□□ -2.23
RPL39-201ENST00000361575 CCL19Q99731 98 aa1.15□□□□□ -2.23
RPL39-201ENST00000361575 MRPL36Q9P0J6 103 aaKnown RBP1.15□□□□□ -2.23
RPL39-201ENST00000361575 LSM2Q9Y333 95 aaKnown RBP1.15□□□□□ -2.23
RPL39-201ENST00000361575 MYH6P13533 1939 aa1.15□□□□□ -2.23
RPL39-201ENST00000361575 PLXNA2O75051 1894 aa1.14□□□□□ -2.23
RPL39-201ENST00000361575 NBDYA0A0U1RRE5 68 aa1.14□□□□□ -2.23
RPL39-201ENST00000361575 TMEM30CPA0ZSE6 113 aa1.14□□□□□ -2.23
RPL39-201ENST00000361575 MPC1LP0DKB6 136 aa1.14□□□□□ -2.23
RPL39-201ENST00000361575 SMIM21Q3B7S5 101 aa1.14□□□□□ -2.23
RPL39-201ENST00000361575 LZICQ8WZA0 190 aa1.14□□□□□ -2.23
RPL39-201ENST00000361575 KNTC1P50748 2209 aa1.13□□□□□ -2.23
RPL39-201ENST00000361575 FBN2P35556 2912 aa1.13□□□□□ -2.23
RPL39-201ENST00000361575 PLGLB1Q02325 96 aa1.13□□□□□ -2.23
RPL39-201ENST00000361575 CLLU1Q5K131 121 aa1.13□□□□□ -2.23
RPL39-201ENST00000361575 Q6ZQY7 126 aa1.13□□□□□ -2.23
RPL39-201ENST00000361575 DEFB132Q7Z7B7 95 aa1.13□□□□□ -2.23
RPL39-201ENST00000361575 MAGOHBQ96A72 148 aaKnown RBP1.13□□□□□ -2.23
RPL39-201ENST00000361575 SMIM3Q9BZL3 60 aa1.13□□□□□ -2.23
RPL39-201ENST00000361575 ZNF462Q96JM2 2506 aa1.13□□□□□ -2.23
RPL39-201ENST00000361575 A0A0G2JMM0 328 aa1.12□□□□□ -2.23
RPL39-201ENST00000361575 TRBV30A0A0K0K1B3 111 aa1.12□□□□□ -2.23
RPL39-201ENST00000361575 FAM236AA0A1B0GUQ0 79 aa1.12□□□□□ -2.23
RPL39-201ENST00000361575 FAM236BA0A1B0GV22 79 aa1.12□□□□□ -2.23
RPL39-201ENST00000361575 LOC101927531A0A1B0GV80 90 aa1.12□□□□□ -2.23
RPL39-201ENST00000361575 LINC00694P0DN24 101 aa1.12□□□□□ -2.23
RPL39-201ENST00000361575 PRB4P10163 310 aaPredicted RBP1.12□□□□□ -2.23
RPL39-201ENST00000361575 EVI2AP22794 236 aa1.12□□□□□ -2.23
RPL39-201ENST00000361575 SLC25A26Q70HW3 274 aa1.12□□□□□ -2.23
RPL39-201ENST00000361575 Q86TA4 180 aa1.12□□□□□ -2.23
RPL39-201ENST00000361575 ABCA4P78363 2273 aa1.12□□□□□ -2.23
RPL39-201ENST00000361575 A0A1W2PPM0 123 aa1.11□□□□□ -2.23
RPL39-201ENST00000361575 K7EIL1 84 aa1.11□□□□□ -2.23
RPL39-201ENST00000361575 TPST1O60507 370 aa1.11□□□□□ -2.23
RPL39-201ENST00000361575 TSPAN19P0C672 248 aa1.11□□□□□ -2.23
RPL39-201ENST00000361575 IQCJQ1A5X6 159 aa1.11□□□□□ -2.23
RPL39-201ENST00000361575 LINC00208Q96KT6 92 aa1.11□□□□□ -2.23
RPL39-201ENST00000361575 MRPL35Q9NZE8 188 aaKnown RBP1.11□□□□□ -2.23
RPL39-201ENST00000361575 OVOS2A0A0J9YW53 1432 aa1.11□□□□□ -2.23
RPL39-201ENST00000361575 OVOS2Q6IE36 1432 aa1.11□□□□□ -2.23
RPL39-201ENST00000361575 AFDNP55196 1824 aaKnown RBP1.1□□□□□ -2.23
RPL39-201ENST00000361575 HMCN1Q96RW7 5635 aa1.1□□□□□ -2.23
RPL39-201ENST00000361575 SMCO1Q147U7 214 aa1.1□□□□□ -2.23
RPL39-201ENST00000361575 XAF1Q6GPH4 301 aa1.1□□□□□ -2.23
RPL39-201ENST00000361575 PRG4Q92954 1404 aaPredicted RBP1.09□□□□□ -2.23
RPL39-201ENST00000361575 CXorf51AA0A1B0GTR3 108 aa1.09□□□□□ -2.23
RPL39-201ENST00000361575 TFF1P04155 84 aa1.09□□□□□ -2.23
RPL39-201ENST00000361575 FXYD3Q14802 87 aa1.09□□□□□ -2.23
RPL39-201ENST00000361575 SNX29P2Q8IUI4 249 aa1.09□□□□□ -2.23
RPL39-201ENST00000361575 DMAC1Q96GE9 116 aa1.09□□□□□ -2.23
RPL39-201ENST00000361575 SPAG17Q6Q759 2223 aa1.09□□□□□ -2.24
RPL39-201ENST00000361575 ZNF469Q96JG9 3925 aaPredicted RBP1.08□□□□□ -2.24
RPL39-201ENST00000361575 DLEC1Q9Y238 1755 aa1.08□□□□□ -2.24
RPL39-201ENST00000361575 ZCCHC6Q5VYS8 1495 aaKnown RBP1.08□□□□□ -2.24
RPL39-201ENST00000361575 M0R129 80 aa1.08□□□□□ -2.24
RPL39-201ENST00000361575 M0R2P5 195 aa1.08□□□□□ -2.24
RPL39-201ENST00000361575 ATP11AUNQ6ZP68 121 aa1.08□□□□□ -2.24
RPL39-201ENST00000361575 C5orf56Q8N8D9 126 aa1.08□□□□□ -2.24
RPL39-201ENST00000361575 ATP6V0E2Q8NHE4 81 aa1.08□□□□□ -2.24
RPL39-201ENST00000361575 PLAC4Q8WY50 150 aa1.08□□□□□ -2.24
RPL39-201ENST00000361575 COPZ2Q9P299 210 aa1.08□□□□□ -2.24
RPL39-201ENST00000361575 CPDO75976 1380 aa1.08□□□□□ -2.24
RPL39-201ENST00000361575 ESPL1Q14674 2120 aa1.07□□□□□ -2.24
RPL39-201ENST00000361575 DISP2A7MBM2 1401 aa1.07□□□□□ -2.24
RPL39-201ENST00000361575 UHRF1BP1LA0JNW5 1464 aa1.07□□□□□ -2.24
RPL39-201ENST00000361575 ERCC6Q03468 1493 aa1.07□□□□□ -2.24
RPL39-201ENST00000361575 TRAV17A0A0B4J275 112 aa1.07□□□□□ -2.24
RPL39-201ENST00000361575 HIGD1CA8MV81 97 aa1.07□□□□□ -2.24
RPL39-201ENST00000361575 RBP4P02753 201 aa1.07□□□□□ -2.24
RPL39-201ENST00000361575 POLR2JP52435 117 aaKnown RBP1.07□□□□□ -2.24
RPL39-201ENST00000361575 MMGT1Q8N4V1 131 aa1.07□□□□□ -2.24
RPL39-201ENST00000361575 ATG5Q9H1Y0 275 aa1.07□□□□□ -2.24
RPL39-201ENST00000361575 NOTCH1P46531 2555 aa1.06□□□□□ -2.24
RPL39-201ENST00000361575 TRBV20-1A0A075B6N2 111 aa1.06□□□□□ -2.24
RPL39-201ENST00000361575 M0R2Z0 102 aa1.06□□□□□ -2.24
RPL39-201ENST00000361575 PITX3O75364 302 aa1.06□□□□□ -2.24
RPL39-201ENST00000361575 CAV3P56539 151 aa1.06□□□□□ -2.24
RPL39-201ENST00000361575 NCS1P62166 190 aa1.06□□□□□ -2.24
RPL39-201ENST00000361575 TSTD1Q8NFU3 115 aa1.06□□□□□ -2.24
RPL39-201ENST00000361575 TAS2R8Q9NYW2 309 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms