RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ZNF474Q6S9Z5 364 aaPredicted RBP11.56□□□□□ -0.56
UBAP1-202ENST00000359544 INTS1Q8N201 2190 aaKnown RBP11.56□□□□□ -0.56
UBAP1-202ENST00000359544 ITPR2Q14571 2701 aa11.56□□□□□ -0.56
UBAP1-202ENST00000359544 MBD3L4A6NDZ8 208 aaPredicted RBP11.56□□□□□ -0.56
UBAP1-202ENST00000359544 MBD3L3A6NE82 208 aaPredicted RBP11.56□□□□□ -0.56
UBAP1-202ENST00000359544 MBD3L5A6NJ08 208 aaPredicted RBP11.56□□□□□ -0.56
UBAP1-202ENST00000359544 RPL7P18124 248 aaKnown RBP11.56□□□□□ -0.56
UBAP1-202ENST00000359544 GAGE5Q13069 117 aa11.56□□□□□ -0.56
UBAP1-202ENST00000359544 GAGE6Q13070 117 aa11.56□□□□□ -0.56
UBAP1-202ENST00000359544 TMEM155Q4W5P6 130 aa11.56□□□□□ -0.56
UBAP1-202ENST00000359544 MBD3L2Q8NHZ7 208 aaPredicted RBP11.56□□□□□ -0.56
UBAP1-202ENST00000359544 Q8TAT8 98 aa11.56□□□□□ -0.56
UBAP1-202ENST00000359544 GLMPQ8WWB7 406 aa11.56□□□□□ -0.56
UBAP1-202ENST00000359544 PKDREJQ9NTG1 2253 aa11.56□□□□□ -0.56
UBAP1-202ENST00000359544 ABCA12Q86UK0 2595 aa11.55□□□□□ -0.56
UBAP1-202ENST00000359544 OR11H6Q8NGC7 330 aa11.55□□□□□ -0.56
UBAP1-202ENST00000359544 FBXL15Q9H469 300 aa11.55□□□□□ -0.56
UBAP1-202ENST00000359544 TMEM262E9PQX1 116 aa11.55□□□□□ -0.56
UBAP1-202ENST00000359544 ZFAND6Q6FIF0 208 aa11.55□□□□□ -0.56
UBAP1-202ENST00000359544 ZNF575Q86XF7 245 aa11.55□□□□□ -0.56
UBAP1-202ENST00000359544 NOTCH2Q04721 2471 aa11.55□□□□□ -0.56
UBAP1-202ENST00000359544 LOC107984156A0A0G2JMH3 177 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 LINC01549A6NIU2 74 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 PLXNB1O43157 2135 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 LGALS1P09382 135 aaKnown RBP11.54□□□□□ -0.56
UBAP1-202ENST00000359544 ARL17AQ8IVW1 177 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 LRBAP50851 2863 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 IGHV1-3A0A0C4DH29 117 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 ZNF688P0C7X2 276 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 LOXP28300 417 aaPredicted RBP11.54□□□□□ -0.56
UBAP1-202ENST00000359544 UBE2D1P51668 147 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 UBE2D3P61077 147 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 UBE2D2P62837 147 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 TMEM78Q5T7P6 136 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 AGRNO00468 2067 aa11.54□□□□□ -0.56
UBAP1-202ENST00000359544 CNIH1O95406 144 aa11.53□□□□□ -0.56
UBAP1-202ENST00000359544 IL17RELQ6ZVW7 336 aa11.53□□□□□ -0.56
UBAP1-202ENST00000359544 RNF5Q99942 180 aa11.53□□□□□ -0.56
UBAP1-202ENST00000359544 SS18L2Q9UHA2 77 aa11.53□□□□□ -0.56
UBAP1-202ENST00000359544 TRBV20-1A0A075B6N2 111 aa11.53□□□□□ -0.56
UBAP1-202ENST00000359544 C17orf100A8MU93 164 aa11.53□□□□□ -0.56
UBAP1-202ENST00000359544 TMEM178BH3BS89 294 aa11.53□□□□□ -0.56
UBAP1-202ENST00000359544 TEX29Q8N6K0 151 aa11.53□□□□□ -0.56
UBAP1-202ENST00000359544 NUP37Q8NFH4 326 aa11.53□□□□□ -0.56
UBAP1-202ENST00000359544 CARD19Q96LW7 228 aa11.53□□□□□ -0.56
UBAP1-202ENST00000359544 A8MWV9 139 aa11.52□□□□□ -0.56
UBAP1-202ENST00000359544 CFAP161Q6P656 301 aa11.52□□□□□ -0.56
UBAP1-202ENST00000359544 LYPD2Q6UXB3 125 aa11.52□□□□□ -0.56
UBAP1-202ENST00000359544 NRACQ8N912 160 aa11.52□□□□□ -0.56
UBAP1-202ENST00000359544 PRSS29PA6NIE9 313 aa11.52□□□□□ -0.57
UBAP1-202ENST00000359544 GATA3P23771 443 aa11.52□□□□□ -0.57
UBAP1-202ENST00000359544 POLQO75417 2590 aa11.52□□□□□ -0.57
UBAP1-202ENST00000359544 TNFRSF13BO14836 293 aaPredicted RBP11.51□□□□□ -0.57
UBAP1-202ENST00000359544 EFNA4P52798 201 aa11.51□□□□□ -0.57
UBAP1-202ENST00000359544 SBSPONQ8IVN8 264 aa11.51□□□□□ -0.57
UBAP1-202ENST00000359544 MFAP4P55083 255 aa11.51□□□□□ -0.57
UBAP1-202ENST00000359544 FAM27E3Q08E93 113 aa11.51□□□□□ -0.57
UBAP1-202ENST00000359544 ZNF672Q499Z4 452 aaPredicted RBP11.51□□□□□ -0.57
UBAP1-202ENST00000359544 APCP25054 2843 aa11.51□□□□□ -0.57
UBAP1-202ENST00000359544 HRNRQ86YZ3 2850 aaPredicted RBP11.51□□□□□ -0.57
UBAP1-202ENST00000359544 SLC25A16P16260 332 aa11.5□□□□□ -0.57
UBAP1-202ENST00000359544 SRSF9Q13242 221 aaKnown RBP eCLIP11.5□□□□□ -0.57
UBAP1-202ENST00000359544 SCGB1D4Q6XE38 83 aa11.5□□□□□ -0.57
UBAP1-202ENST00000359544 LINC01560Q8TB33 94 aa11.5□□□□□ -0.57
UBAP1-202ENST00000359544 CTSZQ9UBR2 303 aa11.5□□□□□ -0.57
UBAP1-202ENST00000359544 TEX15Q9BXT5 2789 aa11.5□□□□□ -0.57
UBAP1-202ENST00000359544 ZNF815PA8K554 130 aa11.5□□□□□ -0.57
UBAP1-202ENST00000359544 IGLV1-47P01700 117 aa11.5□□□□□ -0.57
UBAP1-202ENST00000359544 ORMDL2Q53FV1 153 aa11.5□□□□□ -0.57
UBAP1-202ENST00000359544 ZFP2Q6ZN57 461 aa11.5□□□□□ -0.57
UBAP1-202ENST00000359544 PTH2Q96A98 100 aa11.5□□□□□ -0.57
UBAP1-202ENST00000359544 BUB1B-PAK6H3BSN5 160 aa11.49□□□□□ -0.57
UBAP1-202ENST00000359544 TRGV3P03979 118 aa11.49□□□□□ -0.57
UBAP1-202ENST00000359544 SCGB3A1Q96QR1 104 aa11.49□□□□□ -0.57
UBAP1-202ENST00000359544 PRADC1Q9BSG0 188 aa11.49□□□□□ -0.57
UBAP1-202ENST00000359544 KAAG1Q9UBP8 84 aa11.49□□□□□ -0.57
UBAP1-202ENST00000359544 C22orf34Q6ZV56 151 aa11.49□□□□□ -0.57
UBAP1-202ENST00000359544 CCL17Q92583 94 aa11.49□□□□□ -0.57
UBAP1-202ENST00000359544 SCGB2A1O75556 95 aa11.48□□□□□ -0.57
UBAP1-202ENST00000359544 NEXN-AS1Q8NBZ9 246 aa11.48□□□□□ -0.57
UBAP1-202ENST00000359544 CFHR4Q92496 578 aa11.48□□□□□ -0.57
UBAP1-202ENST00000359544 TOMM6Q96B49 74 aa11.48□□□□□ -0.57
UBAP1-202ENST00000359544 SMIM2Q9BVW6 85 aa11.48□□□□□ -0.57
UBAP1-202ENST00000359544 UFC1Q9Y3C8 167 aa11.48□□□□□ -0.57
UBAP1-202ENST00000359544 RBAKDNA6NC62 111 aa11.47□□□□□ -0.57
UBAP1-202ENST00000359544 IGHG4P01861 327 aa11.47□□□□□ -0.57
UBAP1-202ENST00000359544 CITED1Q99966 193 aa11.47□□□□□ -0.57
UBAP1-202ENST00000359544 ANKHD1Q8IWZ3 2542 aaKnown RBP11.47□□□□□ -0.57
UBAP1-202ENST00000359544 MAST4O15021 2626 aa11.47□□□□□ -0.57
UBAP1-202ENST00000359544 TCL1BO95988 128 aa11.47□□□□□ -0.57
UBAP1-202ENST00000359544 CD7P09564 240 aa11.47□□□□□ -0.57
UBAP1-202ENST00000359544 COX6B1P14854 86 aa11.47□□□□□ -0.57
UBAP1-202ENST00000359544 SRD5A1P18405 259 aa11.47□□□□□ -0.57
UBAP1-202ENST00000359544 NDUFA11Q86Y39 141 aa11.47□□□□□ -0.57
UBAP1-202ENST00000359544 ANKRD29Q8N6D5 301 aa11.47□□□□□ -0.57
UBAP1-202ENST00000359544 NAV2Q8IVL1 2488 aa11.47□□□□□ -0.57
UBAP1-202ENST00000359544 CADP27708 2225 aa11.46□□□□□ -0.57
UBAP1-202ENST00000359544 TRAV26-2A0A0B4J265 109 aa11.46□□□□□ -0.57
UBAP1-202ENST00000359544 ASIPP42127 132 aa11.46□□□□□ -0.57
UBAP1-202ENST00000359544 KRTAP10-9P60411 292 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms