RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 MED14OSP0DP75 135 aa10.05□□□□□ -0.8
CCDC197-201ENST00000359253 GZMBP10144 247 aa10.05□□□□□ -0.8
CCDC197-201ENST00000359253 PRB4P10163 310 aaPredicted RBP10.05□□□□□ -0.8
CCDC197-201ENST00000359253 HLA-DRB4P13762 266 aa10.05□□□□□ -0.8
CCDC197-201ENST00000359253 INSL3P51460 131 aa10.05□□□□□ -0.8
CCDC197-201ENST00000359253 SNRPEP62304 92 aaKnown RBP10.05□□□□□ -0.8
CCDC197-201ENST00000359253 ZNF493Q6ZR52 646 aa10.05□□□□□ -0.8
CCDC197-201ENST00000359253 ZNF256Q9Y2P7 627 aaPredicted RBP10.05□□□□□ -0.8
CCDC197-201ENST00000359253 HLA-DRB4X5D2U9 266 aa10.05□□□□□ -0.8
CCDC197-201ENST00000359253 IGLV1-51P01701 117 aa10.04□□□□□ -0.8
CCDC197-201ENST00000359253 OR5AL1P0C617 328 aa10.04□□□□□ -0.8
CCDC197-201ENST00000359253 CDKN1BP46527 198 aa10.04□□□□□ -0.8
CCDC197-201ENST00000359253 CAMPP49913 170 aa10.04□□□□□ -0.8
CCDC197-201ENST00000359253 DEFB131AP59861 70 aa10.04□□□□□ -0.8
CCDC197-201ENST00000359253 CACNG7P62955 275 aa10.04□□□□□ -0.8
CCDC197-201ENST00000359253 Q0VG73 95 aa10.04□□□□□ -0.8
CCDC197-201ENST00000359253 PRR31Q5SQ13 230 aa10.04□□□□□ -0.8
CCDC197-201ENST00000359253 LYZL1Q6UWQ5 148 aa10.04□□□□□ -0.8
CCDC197-201ENST00000359253 SSBP4Q9BWG4 385 aaPredicted RBP10.04□□□□□ -0.8
CCDC197-201ENST00000359253 TMSB15BA0A087X1C1 80 aa10.03□□□□□ -0.8
CCDC197-201ENST00000359253 C7orf71A4D174 169 aa10.03□□□□□ -0.8
CCDC197-201ENST00000359253 SAP30O75446 220 aa10.03□□□□□ -0.8
CCDC197-201ENST00000359253 AMBPP02760 352 aa10.03□□□□□ -0.8
CCDC197-201ENST00000359253 RNASE4P34096 147 aaKnown RBP10.03□□□□□ -0.8
CCDC197-201ENST00000359253 OR10J3Q5JRS4 329 aa10.03□□□□□ -0.8
CCDC197-201ENST00000359253 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
CCDC197-201ENST00000359253 MAP6D1Q9H9H5 199 aa10.03□□□□□ -0.8
CCDC197-201ENST00000359253 SELENOKQ9Y6D0 94 aa10.03□□□□□ -0.8
CCDC197-201ENST00000359253 IGHV4-4A0A075B6R2 117 aa10.02□□□□□ -0.81
CCDC197-201ENST00000359253 H3BMM0 161 aa10.02□□□□□ -0.81
CCDC197-201ENST00000359253 SNAI2O43623 268 aa10.02□□□□□ -0.81
CCDC197-201ENST00000359253 ARMS2P0C7Q2 107 aa10.02□□□□□ -0.81
CCDC197-201ENST00000359253 CD33P20138 364 aa10.02□□□□□ -0.81
CCDC197-201ENST00000359253 TDRG1Q3Y452 100 aa10.02□□□□□ -0.81
CCDC197-201ENST00000359253 PRR9Q5T870 116 aa10.02□□□□□ -0.81
CCDC197-201ENST00000359253 GDF5OSQ5U4N7 250 aa10.02□□□□□ -0.81
CCDC197-201ENST00000359253 ZNF575Q86XF7 245 aa10.02□□□□□ -0.81
CCDC197-201ENST00000359253 LINC00482Q8N8I6 264 aa10.02□□□□□ -0.81
CCDC197-201ENST00000359253 C20orf144Q9BQM9 153 aa10.02□□□□□ -0.81
CCDC197-201ENST00000359253 OR11H12B2RN74 326 aa10.01□□□□□ -0.81
CCDC197-201ENST00000359253 FRMD6-AS1P0C7T7 363 aa10.01□□□□□ -0.81
CCDC197-201ENST00000359253 ASIPP42127 132 aa10.01□□□□□ -0.81
CCDC197-201ENST00000359253 DEFB1P60022 68 aa10.01□□□□□ -0.81
CCDC197-201ENST00000359253 FAM159AQ6UWV7 190 aa10.01□□□□□ -0.81
CCDC197-201ENST00000359253 AMTNQ6UX39 209 aa10.01□□□□□ -0.81
CCDC197-201ENST00000359253 TPPP3Q9BW30 176 aa10.01□□□□□ -0.81
CCDC197-201ENST00000359253 C11orf21Q9P2W6 132 aa10.01□□□□□ -0.81
CCDC197-201ENST00000359253 ZNF324O75467 553 aaPredicted RBP10□□□□□ -0.81
CCDC197-201ENST00000359253 SLAQ13239 276 aa10□□□□□ -0.81
CCDC197-201ENST00000359253 HIST2H2BDQ6DRA6 164 aa10□□□□□ -0.81
CCDC197-201ENST00000359253 SMIM15Q7Z3B0 74 aa10□□□□□ -0.81
CCDC197-201ENST00000359253 MCRIP2Q9BUT9 160 aaKnown RBP10□□□□□ -0.81
CCDC197-201ENST00000359253 TMEM191AQ9H0A3 160 aa10□□□□□ -0.81
CCDC197-201ENST00000359253 GRIFINA4D1Z8 144 aa9.99□□□□□ -0.81
CCDC197-201ENST00000359253 NTF3P20783 257 aa9.99□□□□□ -0.81
CCDC197-201ENST00000359253 S100A4P26447 101 aaKnown RBP9.99□□□□□ -0.81
CCDC197-201ENST00000359253 S100A2P29034 98 aa9.99□□□□□ -0.81
CCDC197-201ENST00000359253 TWIST1Q15672 202 aa9.99□□□□□ -0.81
CCDC197-201ENST00000359253 BEAN1Q3B7T3 259 aa9.99□□□□□ -0.81
CCDC197-201ENST00000359253 ANXA2RQ3ZCQ2 193 aa9.99□□□□□ -0.81
CCDC197-201ENST00000359253 C9orf66Q5T8R8 295 aa9.99□□□□□ -0.81
CCDC197-201ENST00000359253 ANK2Q01484 3957 aa9.98□□□□□ -0.81
CCDC197-201ENST00000359253 LOC102724200A0A096LPH7 203 aaPredicted RBP9.98□□□□□ -0.81
CCDC197-201ENST00000359253 J3KRW8 73 aa9.98□□□□□ -0.81
CCDC197-201ENST00000359253 ESDP10768 282 aa9.98□□□□□ -0.81
CCDC197-201ENST00000359253 SRIP30626 198 aa9.98□□□□□ -0.81
CCDC197-201ENST00000359253 NUTF2P61970 127 aaKnown RBP9.98□□□□□ -0.81
CCDC197-201ENST00000359253 ODF3L2Q3SX64 289 aa9.98□□□□□ -0.81
CCDC197-201ENST00000359253 GFI1BQ5VTD9 330 aa9.98□□□□□ -0.81
CCDC197-201ENST00000359253 FAM104BQ5XKR9 115 aa9.98□□□□□ -0.81
CCDC197-201ENST00000359253 STHQ8IWL8 128 aa9.98□□□□□ -0.81
CCDC197-201ENST00000359253 HIST3H2BBQ8N257 126 aa9.98□□□□□ -0.81
CCDC197-201ENST00000359253 ALKBH7Q9BT30 221 aaPredicted RBP9.98□□□□□ -0.81
CCDC197-201ENST00000359253 SCRT2Q9NQ03 307 aa9.98□□□□□ -0.81
CCDC197-201ENST00000359253 IGHV1OR15-1A0A075B7D0 117 aa9.97□□□□□ -0.81
CCDC197-201ENST00000359253 TRAV12-3A0A0B4J271 114 aa9.97□□□□□ -0.81
CCDC197-201ENST00000359253 KNCNA6PVL3 124 aa9.97□□□□□ -0.81
CCDC197-201ENST00000359253 PPBPP02775 128 aa9.97□□□□□ -0.81
CCDC197-201ENST00000359253 SPINK13Q1W4C9 94 aa9.97□□□□□ -0.81
CCDC197-201ENST00000359253 BAGE3Q86Y29 109 aa9.97□□□□□ -0.81
CCDC197-201ENST00000359253 WFDC9Q8NEX5 89 aa9.97□□□□□ -0.81
CCDC197-201ENST00000359253 PACRGQ96M98 296 aaPredicted RBP9.97□□□□□ -0.81
CCDC197-201ENST00000359253 LINC00467Q9BRT7 94 aa9.97□□□□□ -0.81
CCDC197-201ENST00000359253 NAGKQ9UJ70 344 aa9.97□□□□□ -0.81
CCDC197-201ENST00000359253 TRGV11A0A075B6L2 103 aa9.96□□□□□ -0.82
CCDC197-201ENST00000359253 KIAA1644Q3SXP7 199 aa9.96□□□□□ -0.82
CCDC197-201ENST00000359253 SPANXN1Q5VSR9 72 aa9.96□□□□□ -0.82
CCDC197-201ENST00000359253 TMEM18Q96B42 140 aa9.96□□□□□ -0.82
CCDC197-201ENST00000359253 LAMTOR2Q9Y2Q5 125 aa9.96□□□□□ -0.82
CCDC197-201ENST00000359253 PHLDA3Q9Y5J5 127 aa9.96□□□□□ -0.82
CCDC197-201ENST00000359253 M0R2Z0 102 aa9.95□□□□□ -0.82
CCDC197-201ENST00000359253 IGKV3-20P01619 116 aa9.95□□□□□ -0.82
CCDC197-201ENST00000359253 U3KQK5 164 aa9.95□□□□□ -0.82
CCDC197-201ENST00000359253 H3BVH4 76 aa9.94□□□□□ -0.82
CCDC197-201ENST00000359253 INSP01308 110 aa9.94□□□□□ -0.82
CCDC197-201ENST00000359253 KIR3DS1Q14943 382 aa9.94□□□□□ -0.82
CCDC197-201ENST00000359253 MUC21Q5SSG8 566 aa9.94□□□□□ -0.82
CCDC197-201ENST00000359253 TRPT1Q86TN4 253 aaKnown RBP9.94□□□□□ -0.82
CCDC197-201ENST00000359253 ORMDL3Q8N138 153 aa9.94□□□□□ -0.82
CCDC197-201ENST00000359253 TMEM256Q8N2U0 113 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms