RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 JMJD8Q96S16 334 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 NAA38Q9BRA0 125 aaKnown RBP6.54□□□□□ -1.36
RFX3-202ENST00000358730 CST9LQ9H4G1 147 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 TMEM8BA6NDV4 472 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 C9orf118A6NHY6 69 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 ZC2HC1BQ5TFG8 222 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 GTSCR1Q86UQ5 136 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 ZFAND2AQ8N6M9 145 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 MYOZ3Q8TDC0 251 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 RAB37Q96AX2 223 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 COL12A1Q99715 3063 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 IGKV3-7A0A075B6H7 116 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 GAGE10A6NGK3 116 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 H3BUT2 72 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 H3BUX3 64 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 S100A4P26447 101 aaKnown RBP6.53□□□□□ -1.36
RFX3-202ENST00000358730 LINC00477Q96M19 166 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 TMEM160Q9NX00 188 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 SMPXQ9UHP9 88 aa6.53□□□□□ -1.36
RFX3-202ENST00000358730 TRAV21A0A0B4J279 112 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 GAGE12BA1L429 117 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 SOCS3O14543 225 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 SPRY2O43597 315 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 PF4V1P10720 104 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 PCP4P48539 62 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 PSMG4Q5JS54 123 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 MRAP2Q96G30 205 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 CCL19Q99731 98 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 SMIM2Q9BVW6 85 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 MRPL35Q9NZE8 188 aaKnown RBP6.52□□□□□ -1.37
RFX3-202ENST00000358730 A0A0G2JLM5 398 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 PRSS47A8MTI9 375 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 OVOL1O14753 267 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 GCSHP23434 173 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 CDKN1BP46527 198 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 CHAC1Q9BUX1 264 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 MEGF9Q9H1U4 602 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 KLK15Q9H2R5 256 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 SELENOKQ9Y6D0 94 aa6.52□□□□□ -1.37
RFX3-202ENST00000358730 SPG11Q96JI7 2443 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 F6UB75 175 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 IGHG2P01859 326 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 ASIPP42127 132 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 SRSF1Q07955 248 aaKnown RBP eCLIP6.51□□□□□ -1.37
RFX3-202ENST00000358730 OCIAD2Q56VL3 154 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 GTF2H5Q6ZYL4 71 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 USMG5Q96IX5 58 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 PHLDA3Q9Y5J5 127 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 MAP1AP78559 2803 aaPredicted RBP6.51□□□□□ -1.37
RFX3-202ENST00000358730 PRORYQ9H606 182 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 H3BUA1 57 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 MGPP08493 103 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 RNASE4P34096 147 aaKnown RBP6.51□□□□□ -1.37
RFX3-202ENST00000358730 ANXA2RQ3ZCQ2 193 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 CLEC2AQ6UVW9 174 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 C14orf178Q8N769 122 aaPredicted RBP6.51□□□□□ -1.37
RFX3-202ENST00000358730 C10orf105Q8TEF2 133 aa6.51□□□□□ -1.37
RFX3-202ENST00000358730 TRBV25-1A0A075B6N4 114 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 A0A087WX48 190 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.5□□□□□ -1.37
RFX3-202ENST00000358730 K7EP34 96 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 FXYD2P54710 66 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 SUMO2P61956 95 aaKnown RBP6.5□□□□□ -1.37
RFX3-202ENST00000358730 BLCAPP62952 87 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 UFSP1Q6NVU6 142 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 DPH3P1Q9H4G8 78 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 HIGD1BQ9P298 99 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.5□□□□□ -1.37
RFX3-202ENST00000358730 A6NDX4 124 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 Q6ZS46 218 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 RASL10AQ92737 203 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 RPL39LQ96EH5 51 aaKnown RBP6.5□□□□□ -1.37
RFX3-202ENST00000358730 RHPN1-AS1Q9BWJ2 59 aa6.5□□□□□ -1.37
RFX3-202ENST00000358730 IGHV4-30-2A0A087WSY4 118 aa6.49□□□□□ -1.37
RFX3-202ENST00000358730 SRD5A1P18405 259 aa6.49□□□□□ -1.37
RFX3-202ENST00000358730 PLNP26678 52 aa6.49□□□□□ -1.37
RFX3-202ENST00000358730 ATP5J2P56134 94 aa6.49□□□□□ -1.37
RFX3-202ENST00000358730 PKD1L2Q7Z442 2459 aa6.49□□□□□ -1.37
RFX3-202ENST00000358730 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
RFX3-202ENST00000358730 ORMDL2Q53FV1 153 aa6.49□□□□□ -1.37
RFX3-202ENST00000358730 VPS25Q9BRG1 176 aa6.49□□□□□ -1.37
RFX3-202ENST00000358730 DAZ1Q9NQZ3 744 aaKnown RBP6.49□□□□□ -1.37
RFX3-202ENST00000358730 K7ERJ3 54 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 NDUFS8O00217 210 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 GNRH2O43555 120 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 BRI3O95415 125 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 MSMBP08118 114 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 SMIM13P0DJ93 91 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 HLA-DRB4P13762 266 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 FAM19A4Q96LR4 140 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 SCGB3A1Q96QR1 104 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 SPCS1Q9Y6A9 102 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 HLA-DRB4X5D2U9 266 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 F8VRH5 84 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 SPOCK3Q9BQ16 436 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 C20orf78Q9BR46 151 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 CSPG4Q6UVK1 2322 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 CELSR2Q9HCU4 2923 aa6.48□□□□□ -1.37
RFX3-202ENST00000358730 H7C1H1 209 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms