RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 IGHV3-33P01772 117 aa8.73□□□□□ -1.01
PSEN1-202ENST00000357710 MRPS36P82909 103 aaKnown RBP8.73□□□□□ -1.01
PSEN1-202ENST00000357710 TMEM200BQ69YZ2 307 aa8.73□□□□□ -1.01
PSEN1-202ENST00000357710 C10orf105Q8TEF2 133 aa8.72□□□□□ -1.01
PSEN1-202ENST00000357710 SPRR3Q9UBC9 169 aa8.72□□□□□ -1.01
PSEN1-202ENST00000357710 PEMTQ9UBM1 199 aa8.72□□□□□ -1.01
PSEN1-202ENST00000357710 DCHS1Q96JQ0 3298 aa8.72□□□□□ -1.01
PSEN1-202ENST00000357710 BRWD1-AS2P59051 145 aa8.72□□□□□ -1.01
PSEN1-202ENST00000357710 ASPMQ8IZT6 3477 aa8.72□□□□□ -1.01
PSEN1-202ENST00000357710 APC2O95996 2303 aa8.72□□□□□ -1.01
PSEN1-202ENST00000357710 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.71□□□□□ -1.01
PSEN1-202ENST00000357710 C17orf100A8MU93 164 aa8.71□□□□□ -1.01
PSEN1-202ENST00000357710 IGHV3-30P01768 117 aa8.71□□□□□ -1.01
PSEN1-202ENST00000357710 IGHV3-30-5P0DP03 117 aa8.71□□□□□ -1.01
PSEN1-202ENST00000357710 WFDC3Q8IUB2 231 aa8.71□□□□□ -1.01
PSEN1-202ENST00000357710 AKAP13Q12802 2813 aa8.71□□□□□ -1.02
PSEN1-202ENST00000357710 SPTBN4Q9H254 2564 aa8.71□□□□□ -1.02
PSEN1-202ENST00000357710 IGKV3D-15A0A087WSY6 115 aa8.71□□□□□ -1.02
PSEN1-202ENST00000357710 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-202ENST00000357710 SRSF12Q8WXF0 261 aaKnown RBP8.71□□□□□ -1.02
PSEN1-202ENST00000357710 C16orf95Q9H693 158 aa8.71□□□□□ -1.02
PSEN1-202ENST00000357710 COX7A2P2O60397 106 aa8.7□□□□□ -1.02
PSEN1-202ENST00000357710 TCRAP04437 139 aa8.7□□□□□ -1.02
PSEN1-202ENST00000357710 COX6B1P14854 86 aa8.7□□□□□ -1.02
PSEN1-202ENST00000357710 FXYD7P58549 80 aa8.7□□□□□ -1.02
PSEN1-202ENST00000357710 OTORQ9NRC9 128 aa8.7□□□□□ -1.02
PSEN1-202ENST00000357710 ACACAQ13085 2346 aa8.7□□□□□ -1.02
PSEN1-202ENST00000357710 SPINT2O43291 252 aa8.7□□□□□ -1.02
PSEN1-202ENST00000357710 PCBD1P61457 104 aa8.7□□□□□ -1.02
PSEN1-202ENST00000357710 LINC01561Q8N1V8 128 aa8.7□□□□□ -1.02
PSEN1-202ENST00000357710 C16orf92Q96LL3 132 aa8.7□□□□□ -1.02
PSEN1-202ENST00000357710 ZNF407Q9C0G0 2248 aa8.7□□□□□ -1.02
PSEN1-202ENST00000357710 FAM201AQ5SY85 155 aa8.69□□□□□ -1.02
PSEN1-202ENST00000357710 C10orf113Q5VZT2 155 aa8.69□□□□□ -1.02
PSEN1-202ENST00000357710 CYSTM1Q9H1C7 97 aa8.69□□□□□ -1.02
PSEN1-202ENST00000357710 DNAJC13O75165 2243 aa8.69□□□□□ -1.02
PSEN1-202ENST00000357710 TRAV41A0A0B4J266 112 aa8.69□□□□□ -1.02
PSEN1-202ENST00000357710 FAM27BQ5VT28 67 aa8.69□□□□□ -1.02
PSEN1-202ENST00000357710 TMEM263Q8WUH6 116 aaKnown RBP8.69□□□□□ -1.02
PSEN1-202ENST00000357710 VKORC1Q9BQB6 163 aa8.69□□□□□ -1.02
PSEN1-202ENST00000357710 A0A0J9YY99 117 aa8.68□□□□□ -1.02
PSEN1-202ENST00000357710 H7C423 109 aa8.68□□□□□ -1.02
PSEN1-202ENST00000357710 MRPL33O75394 65 aaKnown RBP8.68□□□□□ -1.02
PSEN1-202ENST00000357710 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-202ENST00000357710 SYNJ2BPP57105 145 aa8.68□□□□□ -1.02
PSEN1-202ENST00000357710 PMAIP1Q13794 54 aa8.68□□□□□ -1.02
PSEN1-202ENST00000357710 LAMTOR3Q9UHA4 124 aa8.68□□□□□ -1.02
PSEN1-202ENST00000357710 C15orf61A6NNL5 157 aa8.68□□□□□ -1.02
PSEN1-202ENST00000357710 NDUFA3O95167 84 aa8.68□□□□□ -1.02
PSEN1-202ENST00000357710 ZNF22P17026 224 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-202ENST00000357710 URB1O60287 2271 aaKnown RBP8.68□□□□□ -1.02
PSEN1-202ENST00000357710 SLC25A29Q8N8R3 303 aa8.67□□□□□ -1.02
PSEN1-202ENST00000357710 IL17DQ8TAD2 202 aa8.67□□□□□ -1.02
PSEN1-202ENST00000357710 TRBV7-1A0A0A6YYK4 115 aa8.67□□□□□ -1.02
PSEN1-202ENST00000357710 COX6CP09669 75 aa8.66□□□□□ -1.02
PSEN1-202ENST00000357710 CDSNQ15517 529 aa8.66□□□□□ -1.02
PSEN1-202ENST00000357710 LYZL6O75951 148 aa8.66□□□□□ -1.02
PSEN1-202ENST00000357710 DAND5Q8N907 189 aa8.66□□□□□ -1.02
PSEN1-202ENST00000357710 RETNQ9HD89 108 aa8.66□□□□□ -1.02
PSEN1-202ENST00000357710 KNCNA6PVL3 124 aa8.65□□□□□ -1.02
PSEN1-202ENST00000357710 C2orf83Q53S99 150 aa8.65□□□□□ -1.02
PSEN1-202ENST00000357710 PAPPA-AS1Q5QFB9 102 aa8.65□□□□□ -1.02
PSEN1-202ENST00000357710 TMEM75Q8N9X5 138 aa8.65□□□□□ -1.02
PSEN1-202ENST00000357710 BRK1Q8WUW1 75 aa8.65□□□□□ -1.02
PSEN1-202ENST00000357710 ZNF837Q96EG3 531 aaPredicted RBP8.65□□□□□ -1.02
PSEN1-202ENST00000357710 FOXB1Q99853 325 aa8.65□□□□□ -1.02
PSEN1-202ENST00000357710 CEP295Q9C0D2 2601 aa8.65□□□□□ -1.03
PSEN1-202ENST00000357710 SS18L1O75177 396 aaPredicted RBP8.65□□□□□ -1.03
PSEN1-202ENST00000357710 AVPP01185 164 aa8.65□□□□□ -1.03
PSEN1-202ENST00000357710 IGHV4-39P01824 125 aa8.65□□□□□ -1.03
PSEN1-202ENST00000357710 SMCR5Q8TEV8 140 aa8.65□□□□□ -1.03
PSEN1-202ENST00000357710 ZNF71Q9NQZ8 489 aaPredicted RBP8.65□□□□□ -1.03
PSEN1-202ENST00000357710 IGHV3-13P01766 116 aa8.64□□□□□ -1.03
PSEN1-202ENST00000357710 LAGE3Q14657 143 aa8.64□□□□□ -1.03
PSEN1-202ENST00000357710 HS3ST6Q96QI5 342 aa8.64□□□□□ -1.03
PSEN1-202ENST00000357710 TMEM14BQ9NUH8 114 aa8.64□□□□□ -1.03
PSEN1-202ENST00000357710 IGKV1OR2-108A0A075B7D4 117 aa8.64□□□□□ -1.03
PSEN1-202ENST00000357710 FCGR3BO75015 233 aa8.64□□□□□ -1.03
PSEN1-202ENST00000357710 FSTL3O95633 263 aa8.64□□□□□ -1.03
PSEN1-202ENST00000357710 MORN5Q5VZ52 161 aa8.64□□□□□ -1.03
PSEN1-202ENST00000357710 PTPRQQ9UMZ3 2332 aa8.64□□□□□ -1.03
PSEN1-202ENST00000357710 LINC00473A8K010 186 aa8.63□□□□□ -1.03
PSEN1-202ENST00000357710 IGHV3-9P01782 118 aa8.63□□□□□ -1.03
PSEN1-202ENST00000357710 Q1RN00 199 aa8.63□□□□□ -1.03
PSEN1-202ENST00000357710 Q8IYB0 196 aa8.63□□□□□ -1.03
PSEN1-202ENST00000357710 WFDC11Q8NEX6 87 aa8.63□□□□□ -1.03
PSEN1-202ENST00000357710 FAM110DQ8TAY7 271 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-202ENST00000357710 C4orf48Q5BLP8 95 aa8.63□□□□□ -1.03
PSEN1-202ENST00000357710 LYZL1Q6UWQ5 148 aa8.63□□□□□ -1.03
PSEN1-202ENST00000357710 IGLV2-18A0A075B6J9 118 aa8.62□□□□□ -1.03
PSEN1-202ENST00000357710 A0A0U1RQV1 116 aa8.62□□□□□ -1.03
PSEN1-202ENST00000357710 TMEM30CPA0ZSE6 113 aa8.62□□□□□ -1.03
PSEN1-202ENST00000357710 CD69Q07108 199 aa8.62□□□□□ -1.03
PSEN1-202ENST00000357710 RNF182Q8N6D2 247 aa8.62□□□□□ -1.03
PSEN1-202ENST00000357710 Q8NA96 180 aa8.62□□□□□ -1.03
PSEN1-202ENST00000357710 Q9H3A6 140 aa8.62□□□□□ -1.03
PSEN1-202ENST00000357710 ZFHX4Q86UP3 3567 aa8.62□□□□□ -1.03
PSEN1-202ENST00000357710 RAI1Q7Z5J4 1906 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-202ENST00000357710 ZNF134P52741 427 aa8.62□□□□□ -1.03
PSEN1-202ENST00000357710 TMEM243Q9BU79 118 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms