RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 TMSB15BA0A087X1C1 80 aa18.3■□□□□ 0.52
SSBP3-202ENST00000357475 GNRH2O43555 120 aa18.3■□□□□ 0.52
SSBP3-202ENST00000357475 DEFB4AO15263 64 aa18.29■□□□□ 0.52
SSBP3-202ENST00000357475 ORM1P02763 201 aa18.29■□□□□ 0.52
SSBP3-202ENST00000357475 FAM159AQ6UWV7 190 aa18.29■□□□□ 0.52
SSBP3-202ENST00000357475 ISOC2Q96AB3 205 aa18.29■□□□□ 0.52
SSBP3-202ENST00000357475 CBY3A6NI87 242 aa18.28■□□□□ 0.52
SSBP3-202ENST00000357475 TYMSP04818 313 aa18.28■□□□□ 0.52
SSBP3-202ENST00000357475 NUDT10Q8NFP7 164 aa18.28■□□□□ 0.52
SSBP3-202ENST00000357475 NUDT11Q96G61 164 aa18.28■□□□□ 0.52
SSBP3-202ENST00000357475 SEC11CQ9BY50 192 aa18.28■□□□□ 0.52
SSBP3-202ENST00000357475 KRBOX1C9JBD0 128 aa18.28■□□□□ 0.52
SSBP3-202ENST00000357475 NDUFA5Q16718 116 aa18.28■□□□□ 0.52
SSBP3-202ENST00000357475 TDRG1Q3Y452 100 aa18.28■□□□□ 0.52
SSBP3-202ENST00000357475 Q8NAQ8 132 aa18.28■□□□□ 0.52
SSBP3-202ENST00000357475 NEU1Q99519 415 aa18.28■□□□□ 0.52
SSBP3-202ENST00000357475 LINC00467Q9BRT7 94 aa18.28■□□□□ 0.52
SSBP3-202ENST00000357475 IGHV4-28A0A0C4DH34 117 aa18.27■□□□□ 0.51
SSBP3-202ENST00000357475 RRN3P1Q2M238 152 aa18.27■□□□□ 0.51
SSBP3-202ENST00000357475 LINC01559Q495D7 138 aa18.27■□□□□ 0.51
SSBP3-202ENST00000357475 C10orf91Q5T1B1 145 aa18.27■□□□□ 0.51
SSBP3-202ENST00000357475 GRIFINA4D1Z8 144 aa18.26■□□□□ 0.51
SSBP3-202ENST00000357475 B4DEV8 164 aa18.26■□□□□ 0.51
SSBP3-202ENST00000357475 RNASE8Q8TDE3 154 aaKnown RBP18.26■□□□□ 0.51
SSBP3-202ENST00000357475 ZMAT4Q9H898 229 aa18.26■□□□□ 0.51
SSBP3-202ENST00000357475 BIN3Q9NQY0 253 aa18.26■□□□□ 0.51
SSBP3-202ENST00000357475 MDFICQ9P1T7 246 aa18.26■□□□□ 0.51
SSBP3-202ENST00000357475 PLAC8L1A1L4L8 177 aa18.25■□□□□ 0.51
SSBP3-202ENST00000357475 IBA57Q5T440 356 aaKnown RBP18.25■□□□□ 0.51
SSBP3-202ENST00000357475 DAZAP1Q96EP5 407 aaKnown RBP18.25■□□□□ 0.51
SSBP3-202ENST00000357475 P01737 135 aa18.24■□□□□ 0.51
SSBP3-202ENST00000357475 GZMBP10144 247 aa18.24■□□□□ 0.51
SSBP3-202ENST00000357475 ERVFC1-1P60608 527 aa18.24■□□□□ 0.51
SSBP3-202ENST00000357475 C11orf72Q8NBR9 251 aa18.24■□□□□ 0.51
SSBP3-202ENST00000357475 SMIM9A6NGZ8 99 aa18.23■□□□□ 0.51
SSBP3-202ENST00000357475 EMP1P54849 157 aa18.23■□□□□ 0.51
SSBP3-202ENST00000357475 OR2D3Q8NGH3 330 aa18.23■□□□□ 0.51
SSBP3-202ENST00000357475 CARHSP1Q9Y2V2 147 aaKnown RBP18.23■□□□□ 0.51
SSBP3-202ENST00000357475 IGHV3-16A0A0C4DH30 117 aa18.23■□□□□ 0.51
SSBP3-202ENST00000357475 TMEM189A5PLL7 270 aa18.23■□□□□ 0.51
SSBP3-202ENST00000357475 MIFP14174 115 aa18.23■□□□□ 0.51
SSBP3-202ENST00000357475 FAM231DQ6ZW35 169 aa18.23■□□□□ 0.51
SSBP3-202ENST00000357475 TMEM263Q8WUH6 116 aaKnown RBP18.23■□□□□ 0.51
SSBP3-202ENST00000357475 SFRP2Q96HF1 295 aa18.23■□□□□ 0.51
SSBP3-202ENST00000357475 KCNS1Q96KK3 526 aa18.23■□□□□ 0.51
SSBP3-202ENST00000357475 GSN-AS1Q9NRJ2 163 aa18.23■□□□□ 0.51
SSBP3-202ENST00000357475 RPP21Q9H633 154 aaKnown RBP18.21■□□□□ 0.51
SSBP3-202ENST00000357475 NHLRC4P0CG21 123 aaPredicted RBP18.2■□□□□ 0.5
SSBP3-202ENST00000357475 PNRC1Q12796 327 aaPredicted RBP18.2■□□□□ 0.5
SSBP3-202ENST00000357475 C16orf74Q96GX8 76 aa18.2■□□□□ 0.5
SSBP3-202ENST00000357475 OSTCQ9NRP0 149 aa18.2■□□□□ 0.5
SSBP3-202ENST00000357475 TRGV11A0A075B6L2 103 aa18.19■□□□□ 0.5
SSBP3-202ENST00000357475 A0A0J9YWU9 116 aa18.19■□□□□ 0.5
SSBP3-202ENST00000357475 GATCO43716 136 aaKnown RBP18.19■□□□□ 0.5
SSBP3-202ENST00000357475 RNASE3P12724 160 aaKnown RBP18.19■□□□□ 0.5
SSBP3-202ENST00000357475 MUC4Q99102 2169 aa18.19■□□□□ 0.5
SSBP3-202ENST00000357475 TIMM8BQ9Y5J9 83 aaPredicted RBP18.19■□□□□ 0.5
SSBP3-202ENST00000357475 V9GYV3 84 aa18.19■□□□□ 0.5
SSBP3-202ENST00000357475 IL17DQ8TAD2 202 aa18.18■□□□□ 0.5
SSBP3-202ENST00000357475 H3BVH4 76 aa18.18■□□□□ 0.5
SSBP3-202ENST00000357475 OR10G8Q8NGN5 311 aa18.18■□□□□ 0.5
SSBP3-202ENST00000357475 APOC3P02656 99 aa18.17■□□□□ 0.5
SSBP3-202ENST00000357475 ASIPP42127 132 aa18.17■□□□□ 0.5
SSBP3-202ENST00000357475 TCL1AP56279 114 aa18.17■□□□□ 0.5
SSBP3-202ENST00000357475 ZNF415Q09FC8 603 aa18.17■□□□□ 0.5
SSBP3-202ENST00000357475 RNF212Q495C1 297 aa18.17■□□□□ 0.5
SSBP3-202ENST00000357475 ZNF493Q6ZR52 646 aa18.17■□□□□ 0.5
SSBP3-202ENST00000357475 CELA1Q9UNI1 258 aa18.17■□□□□ 0.5
SSBP3-202ENST00000357475 C15orf54Q8N8G6 183 aa18.16■□□□□ 0.5
SSBP3-202ENST00000357475 NOP10Q9NPE3 64 aaKnown RBP18.16■□□□□ 0.5
SSBP3-202ENST00000357475 C9orf85Q96MD7 179 aa18.15■□□□□ 0.5
SSBP3-202ENST00000357475 TGP01266 2768 aa18.15■□□□□ 0.5
SSBP3-202ENST00000357475 STAB2Q8WWQ8 2551 aa18.14■□□□□ 0.5
SSBP3-202ENST00000357475 ARMS2P0C7Q2 107 aa18.14■□□□□ 0.49
SSBP3-202ENST00000357475 S100A4P26447 101 aaKnown RBP18.14■□□□□ 0.49
SSBP3-202ENST00000357475 DNLZQ5SXM8 178 aa18.14■□□□□ 0.49
SSBP3-202ENST00000357475 GTSF1Q8WW33 167 aa18.14■□□□□ 0.49
SSBP3-202ENST00000357475 C11orf68Q9H3H3 251 aaKnown RBP18.14■□□□□ 0.49
SSBP3-202ENST00000357475 MUC21A0A0G2JKD1 596 aa18.13■□□□□ 0.49
SSBP3-202ENST00000357475 MUC21A0A140T8X8 626 aa18.13■□□□□ 0.49
SSBP3-202ENST00000357475 U3KQK5 164 aa18.13■□□□□ 0.49
SSBP3-202ENST00000357475 SNURFLB1AK76 121 aa18.13■□□□□ 0.49
SSBP3-202ENST00000357475 CXCL1P09341 107 aa18.13■□□□□ 0.49
SSBP3-202ENST00000357475 IGLC6P0CF74 106 aa18.13■□□□□ 0.49
SSBP3-202ENST00000357475 RPS20P60866 119 aaKnown RBP18.13■□□□□ 0.49
SSBP3-202ENST00000357475 FAM222AQ5U5X8 452 aa18.13■□□□□ 0.49
SSBP3-202ENST00000357475 CLRN3Q8NCR9 226 aa18.13■□□□□ 0.49
SSBP3-202ENST00000357475 TPPP3Q9BW30 176 aa18.12■□□□□ 0.49
SSBP3-202ENST00000357475 MRPL16Q9NX20 251 aaKnown RBP18.12■□□□□ 0.49
SSBP3-202ENST00000357475 IL36BQ9NZH7 164 aa18.12■□□□□ 0.49
SSBP3-202ENST00000357475 DAZ2Q13117 558 aaKnown RBP18.11■□□□□ 0.49
SSBP3-202ENST00000357475 CT83Q5H943 113 aa18.11■□□□□ 0.49
SSBP3-202ENST00000357475 Q6ZTI0 123 aa18.11■□□□□ 0.49
SSBP3-202ENST00000357475 SCRT2Q9NQ03 307 aa18.11■□□□□ 0.49
SSBP3-202ENST00000357475 DKK2Q9UBU2 259 aa18.11■□□□□ 0.49
SSBP3-202ENST00000357475 FER1L6-AS1Q8NA97 138 aa18.1■□□□□ 0.49
SSBP3-202ENST00000357475 C7orf77A4D0Y5 90 aa18.09■□□□□ 0.49
SSBP3-202ENST00000357475 SPINK4O60575 86 aa18.09■□□□□ 0.49
SSBP3-202ENST00000357475 SSTP61278 116 aa18.09■□□□□ 0.49
SSBP3-202ENST00000357475 OR10AG1Q8NH19 301 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms