RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 ATP6V1FQ16864 119 aa5.71□□□□□ -1.5
COL4A3BP-202ENST00000357457 GCSAMLQ5JQS6 135 aa5.71□□□□□ -1.5
COL4A3BP-202ENST00000357457 SERTAD4-AS1Q5TG53 156 aa5.71□□□□□ -1.5
COL4A3BP-202ENST00000357457 Q6AWC8 147 aa5.71□□□□□ -1.5
COL4A3BP-202ENST00000357457 FAM122CQ6P4D5 195 aa5.71□□□□□ -1.5
COL4A3BP-202ENST00000357457 WDR73Q6P4I2 378 aa5.71□□□□□ -1.5
COL4A3BP-202ENST00000357457 SDHCQ99643 169 aaPredicted RBP5.71□□□□□ -1.5
COL4A3BP-202ENST00000357457 LENEPQ9Y5L5 61 aa5.71□□□□□ -1.5
COL4A3BP-202ENST00000357457 UBE2L5PA0A1B0GUS4 154 aa5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 CCSO14618 274 aa5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 GATA1P15976 413 aaPredicted RBP5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 BAXQ07812 192 aa5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 ZNF846Q147U1 533 aa5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 TDRG1Q3Y452 100 aa5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 SPANXN2Q5MJ10 180 aa5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 MUC21Q5SSG8 566 aa5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 TMEM252Q8N6L7 170 aa5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 DEFB104AQ8WTQ1 72 aa5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 OR51M1Q9H341 326 aa5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 GPN1Q9HCN4 374 aaPredicted RBP5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 LYRM2Q9NU23 88 aaPredicted RBP5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 LSM5Q9Y4Y9 91 aaKnown RBP5.7□□□□□ -1.5
COL4A3BP-202ENST00000357457 TNXBP22105 4242 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 TRGV11A0A075B6L2 103 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 LOC100131303A0A0U1RQF7 123 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 IGSF23A1L1A6 192 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 CENPXA8MT69 81 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 M0R2P5 195 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 PVALBP20472 110 aaPredicted RBP5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 FGF7P21781 194 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 INPP1P49441 399 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 HBG1P69891 147 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 HBG2P69892 147 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 TMEM183BQ1AE95 376 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 TRIQKQ629K1 86 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 FAM159AQ6UWV7 190 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 MIR17HGQ75NE6 70 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 TMEM183AQ8IXX5 376 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 OR4C5Q8NGB2 326 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 Q8TAT8 98 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 FXYD5Q96DB9 178 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 C2orf50Q96LR7 162 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 NPCDR1Q9BY65 106 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 SLC25A31Q9H0C2 315 aa5.69□□□□□ -1.5
COL4A3BP-202ENST00000357457 TRAV8-6A0A0B4J262 113 aa5.68□□□□□ -1.5
COL4A3BP-202ENST00000357457 PFN1P07737 140 aaKnown RBP5.68□□□□□ -1.5
COL4A3BP-202ENST00000357457 LAGE3Q14657 143 aa5.68□□□□□ -1.5
COL4A3BP-202ENST00000357457 STX12Q86Y82 276 aa5.68□□□□□ -1.5
COL4A3BP-202ENST00000357457 TMED6Q8WW62 240 aa5.68□□□□□ -1.5
COL4A3BP-202ENST00000357457 PAXXQ9BUH6 204 aa5.68□□□□□ -1.5
COL4A3BP-202ENST00000357457 IGHV3-16A0A0C4DH30 117 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 C5orf51A6NDU8 294 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 FAM25EA8MYX2 175 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 DIRC3C9JPN6 131 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 PLA2G10O15496 165 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 GNRH2O43555 120 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 CIDEAO60543 219 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 CSN1S1P47710 185 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 KRTAP10-4P60372 401 aaPredicted RBP5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 WFDC2Q14508 124 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 LELP1Q5T871 98 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 SLC25A29Q8N8R3 303 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 NHLRC2Q8NBF2 726 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 PHYHIPLQ96FC7 376 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 TM2D2Q9BX73 214 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 Q9HAA7 133 aa5.67□□□□□ -1.5
COL4A3BP-202ENST00000357457 TRBV6-4A0A1B0GX49 114 aa5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 OXTP01178 125 aa5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 TCRBP04435 133 aa5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 OR10J4P0C629 311 aa5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 IL7P13232 177 aa5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 PPT1P50897 306 aa5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 RANP62826 216 aaKnown RBP5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 NHLH2Q02577 135 aa5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 OR10J3Q5JRS4 329 aa5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 SYT8Q8NBV8 401 aa5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 RBM38Q9H0Z9 239 aaKnown RBP5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
COL4A3BP-202ENST00000357457 TRAV21A0A0B4J279 112 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 FBLL1A6NHQ2 334 aaKnown RBP5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 RS1O15537 224 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 IGHV3-30P01768 117 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 IGHV3-33P01772 117 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 TYMSP04818 313 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 IGHV3-30-3P0DP02 117 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 IGHV3-30-5P0DP03 117 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 LINC00310P59036 64 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 S100A10P60903 97 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 OR5C1Q8NGR4 320 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 SEC22CQ9BRL7 303 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 GTSF1LQ9H1H1 148 aa5.65□□□□□ -1.5
COL4A3BP-202ENST00000357457 TRAV6A0A075B6T7 132 aa5.64□□□□□ -1.51
COL4A3BP-202ENST00000357457 TRAV8-3A0A0A6YYJ7 113 aa5.64□□□□□ -1.51
COL4A3BP-202ENST00000357457 TRAV34A0A0B4J273 112 aa5.64□□□□□ -1.51
COL4A3BP-202ENST00000357457 LYRM1O43325 122 aa5.64□□□□□ -1.51
COL4A3BP-202ENST00000357457 ASAH1Q13510 395 aa5.64□□□□□ -1.51
COL4A3BP-202ENST00000357457 RHOHQ15669 191 aa5.64□□□□□ -1.51
COL4A3BP-202ENST00000357457 CFAP126Q5VTH2 177 aa5.64□□□□□ -1.51
COL4A3BP-202ENST00000357457 DPPA3Q6W0C5 159 aa5.64□□□□□ -1.51
COL4A3BP-202ENST00000357457 SCXQ7RTU7 201 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms