RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 TMEM219Q86XT9 240 aa13.5□□□□□ -0.25
GYPC-202ENST00000356887 OR11H1Q8NG94 326 aa13.5□□□□□ -0.25
GYPC-202ENST00000356887 OR11H2Q8NH07 326 aa13.5□□□□□ -0.25
GYPC-202ENST00000356887 TMEM158Q8WZ71 300 aa13.5□□□□□ -0.25
GYPC-202ENST00000356887 TSPAN13O95857 204 aa13.49□□□□□ -0.25
GYPC-202ENST00000356887 Q6ZQT7 251 aa13.49□□□□□ -0.25
GYPC-202ENST00000356887 NRACQ8N912 160 aa13.49□□□□□ -0.25
GYPC-202ENST00000356887 GLMPQ8WWB7 406 aa13.49□□□□□ -0.25
GYPC-202ENST00000356887 MRAP2Q96G30 205 aa13.49□□□□□ -0.25
GYPC-202ENST00000356887 HHLA3Q9XRX5 114 aa13.49□□□□□ -0.25
GYPC-202ENST00000356887 MOB4Q9Y3A3 225 aa13.49□□□□□ -0.25
GYPC-202ENST00000356887 FAM223BA6NKX1 122 aa13.49□□□□□ -0.25
GYPC-202ENST00000356887 CRIP2P52943 208 aaPredicted RBP13.49□□□□□ -0.25
GYPC-202ENST00000356887 FAM223AQ8IWN6 122 aa13.49□□□□□ -0.25
GYPC-202ENST00000356887 ZNF843Q8N446 348 aa13.49□□□□□ -0.25
GYPC-202ENST00000356887 OR5A1Q8NGJ0 315 aa13.49□□□□□ -0.25
GYPC-202ENST00000356887 C9orf118A6NHY6 69 aa13.48□□□□□ -0.25
GYPC-202ENST00000356887 PRSS1P07477 247 aa13.48□□□□□ -0.25
GYPC-202ENST00000356887 C16orf92Q96LL3 132 aa13.48□□□□□ -0.25
GYPC-202ENST00000356887 C20orf173Q96LM9 149 aa13.48□□□□□ -0.25
GYPC-202ENST00000356887 KMT2BQ9UMN6 2715 aaPredicted RBP13.47□□□□□ -0.25
GYPC-202ENST00000356887 LINC00527Q9UJ94 153 aa13.47□□□□□ -0.25
GYPC-202ENST00000356887 ATP5LO75964 103 aa13.46□□□□□ -0.25
GYPC-202ENST00000356887 IGKCP01834 107 aa13.46□□□□□ -0.25
GYPC-202ENST00000356887 KIR3DS1Q14943 382 aa13.46□□□□□ -0.25
GYPC-202ENST00000356887 PRR9Q5T870 116 aa13.46□□□□□ -0.25
GYPC-202ENST00000356887 C9orf139Q6ZV77 190 aa13.46□□□□□ -0.25
GYPC-202ENST00000356887 FOXC2Q99958 501 aa13.46□□□□□ -0.25
GYPC-202ENST00000356887 LENEPQ9Y5L5 61 aa13.46□□□□□ -0.25
GYPC-202ENST00000356887 IGHV3OR16-10A0A075B7F0 116 aa13.46□□□□□ -0.26
GYPC-202ENST00000356887 IGKV2D-26A0A0A0MRZ7 120 aa13.46□□□□□ -0.26
GYPC-202ENST00000356887 CD300EQ496F6 205 aaPredicted RBP13.46□□□□□ -0.26
GYPC-202ENST00000356887 TRAV26-2A0A0B4J265 109 aa13.45□□□□□ -0.26
GYPC-202ENST00000356887 K7EP34 96 aa13.45□□□□□ -0.26
GYPC-202ENST00000356887 ARL3P36405 182 aa13.45□□□□□ -0.26
GYPC-202ENST00000356887 LAGE3Q14657 143 aa13.45□□□□□ -0.26
GYPC-202ENST00000356887 SPANXN1Q5VSR9 72 aa13.45□□□□□ -0.26
GYPC-202ENST00000356887 UFC1Q9Y3C8 167 aa13.45□□□□□ -0.26
GYPC-202ENST00000356887 IGHV1-69DA0A0B4J2H0 117 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 C19orf84I3L1E1 186 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 IGHV1-69P01742 117 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 FAM110AQ9BQ89 295 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 DPM2O94777 84 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 IGHV4-39P01824 125 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 IGF1P05019 195 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 SMAGPQ0VAQ4 97 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 GPHB5Q86YW7 130 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 LINC00477Q96M19 166 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 AP1S3Q96PC3 154 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 JMJD8Q96S16 334 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 SPATA25Q9BR10 227 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 HIGD1BQ9P298 99 aa13.44□□□□□ -0.26
GYPC-202ENST00000356887 ZNF462Q96JM2 2506 aa13.43□□□□□ -0.26
GYPC-202ENST00000356887 H3BVH4 76 aa13.43□□□□□ -0.26
GYPC-202ENST00000356887 J3QR89 54 aa13.43□□□□□ -0.26
GYPC-202ENST00000356887 UNQ9165/PRO28630Q6UXU0 137 aa13.43□□□□□ -0.26
GYPC-202ENST00000356887 TRBV12-3P01733 135 aa13.43□□□□□ -0.26
GYPC-202ENST00000356887 MYOZ3Q8TDC0 251 aa13.43□□□□□ -0.26
GYPC-202ENST00000356887 H3BUT2 72 aa13.42□□□□□ -0.26
GYPC-202ENST00000356887 NDUFA4O00483 81 aa13.42□□□□□ -0.26
GYPC-202ENST00000356887 SOCS3O14543 225 aa13.42□□□□□ -0.26
GYPC-202ENST00000356887 SRSF1Q07955 248 aaKnown RBP eCLIP13.42□□□□□ -0.26
GYPC-202ENST00000356887 ZFAND2AQ8N6M9 145 aa13.42□□□□□ -0.26
GYPC-202ENST00000356887 A0A0G2JLM5 398 aa13.41□□□□□ -0.26
GYPC-202ENST00000356887 OVOL1O14753 267 aa13.41□□□□□ -0.26
GYPC-202ENST00000356887 BRD3OSQ6XYD6 125 aa13.41□□□□□ -0.26
GYPC-202ENST00000356887 GTSCR1Q86UQ5 136 aa13.41□□□□□ -0.26
GYPC-202ENST00000356887 GTSF1LQ9H1H1 148 aa13.41□□□□□ -0.26
GYPC-202ENST00000356887 SHISA2Q6UWI4 295 aa13.41□□□□□ -0.26
GYPC-202ENST00000356887 TTTY13Q9BZ97 58 aa13.41□□□□□ -0.26
GYPC-202ENST00000356887 BRI3O95415 125 aa13.4□□□□□ -0.26
GYPC-202ENST00000356887 ZC2HC1BQ5TFG8 222 aa13.4□□□□□ -0.26
GYPC-202ENST00000356887 GEMIN7Q9H840 131 aaKnown RBP13.4□□□□□ -0.26
GYPC-202ENST00000356887 MRPL35Q9NZE8 188 aaKnown RBP13.4□□□□□ -0.26
GYPC-202ENST00000356887 GAGE12HA6NDE8 117 aa13.4□□□□□ -0.27
GYPC-202ENST00000356887 HLA-DRB4P13762 266 aa13.4□□□□□ -0.27
GYPC-202ENST00000356887 FOXI2Q6ZQN5 318 aa13.4□□□□□ -0.27
GYPC-202ENST00000356887 OR10J6PQ8NGY7 276 aa13.4□□□□□ -0.27
GYPC-202ENST00000356887 TMEM160Q9NX00 188 aa13.4□□□□□ -0.27
GYPC-202ENST00000356887 HLA-DRB4X5D2U9 266 aa13.4□□□□□ -0.27
GYPC-202ENST00000356887 SVEP1Q4LDE5 3571 aa13.39□□□□□ -0.27
GYPC-202ENST00000356887 A0A087WX48 190 aa13.39□□□□□ -0.27
GYPC-202ENST00000356887 TRAV21A0A0B4J279 112 aa13.39□□□□□ -0.27
GYPC-202ENST00000356887 TRAV40A0A0B4J280 105 aa13.39□□□□□ -0.27
GYPC-202ENST00000356887 RAB37Q96AX2 223 aa13.39□□□□□ -0.27
GYPC-202ENST00000356887 NAA38Q9BRA0 125 aaKnown RBP13.39□□□□□ -0.27
GYPC-202ENST00000356887 USMG5Q96IX5 58 aa13.38□□□□□ -0.27
GYPC-202ENST00000356887 FAM19A4Q96LR4 140 aa13.38□□□□□ -0.27
GYPC-202ENST00000356887 CHAC1Q9BUX1 264 aa13.38□□□□□ -0.27
GYPC-202ENST00000356887 SMIM2Q9BVW6 85 aa13.38□□□□□ -0.27
GYPC-202ENST00000356887 ASH1LQ9NR48 2969 aaKnown RBP13.38□□□□□ -0.27
GYPC-202ENST00000356887 FLNCQ14315 2725 aa13.38□□□□□ -0.27
GYPC-202ENST00000356887 TRBV25-1A0A075B6N4 114 aa13.38□□□□□ -0.27
GYPC-202ENST00000356887 H3BUA1 57 aa13.38□□□□□ -0.27
GYPC-202ENST00000356887 ABCA2Q9BZC7 2435 aa13.37□□□□□ -0.27
GYPC-202ENST00000356887 USP9XQ93008 2570 aaPredicted RBP13.37□□□□□ -0.27
GYPC-202ENST00000356887 MYO18BQ8IUG5 2567 aa13.37□□□□□ -0.27
GYPC-202ENST00000356887 IGHV4-61A0A0C4DH41 118 aa13.37□□□□□ -0.27
GYPC-202ENST00000356887 IGHG2P01859 326 aa13.37□□□□□ -0.27
GYPC-202ENST00000356887 SMIM13P0DJ93 91 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 349.5 ms