RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 G3V318 75 aa10□□□□□ -0.81
SYNCRIP-201ENST00000355238 PI4KAP42356 2102 aa10□□□□□ -0.81
SYNCRIP-201ENST00000355238 TRAV12-2A0A075B6T6 113 aa10□□□□□ -0.81
SYNCRIP-201ENST00000355238 ZNF503-AS2A6NEH8 195 aa10□□□□□ -0.81
SYNCRIP-201ENST00000355238 SPATA12Q7Z6I5 190 aa10□□□□□ -0.81
SYNCRIP-201ENST00000355238 CRYGCP07315 174 aa10□□□□□ -0.81
SYNCRIP-201ENST00000355238 PIFOQ8TCI5 191 aa10□□□□□ -0.81
SYNCRIP-201ENST00000355238 MYO7BQ6PIF6 2116 aa10□□□□□ -0.81
SYNCRIP-201ENST00000355238 HEATR1Q9H583 2144 aaKnown RBP9.99□□□□□ -0.81
SYNCRIP-201ENST00000355238 CHD3Q12873 2000 aaKnown RBP9.99□□□□□ -0.81
SYNCRIP-201ENST00000355238 FER1L5A0AVI2 2057 aa9.99□□□□□ -0.81
SYNCRIP-201ENST00000355238 FOXE3Q13461 319 aa9.99□□□□□ -0.81
SYNCRIP-201ENST00000355238 RNASE13Q5GAN3 156 aaKnown RBP9.99□□□□□ -0.81
SYNCRIP-201ENST00000355238 Q6ZUT4 128 aa9.99□□□□□ -0.81
SYNCRIP-201ENST00000355238 PLXNA4Q9HCM2 1894 aa9.99□□□□□ -0.81
SYNCRIP-201ENST00000355238 RNF183Q96D59 192 aa9.99□□□□□ -0.81
SYNCRIP-201ENST00000355238 IGKV3D-7A0A0C4DH55 119 aa9.99□□□□□ -0.81
SYNCRIP-201ENST00000355238 C2orf70A6NJV1 201 aa9.99□□□□□ -0.81
SYNCRIP-201ENST00000355238 IGLV1-44P01699 117 aa9.99□□□□□ -0.81
SYNCRIP-201ENST00000355238 IGHV7-4-1A0A0J9YVY3 117 aa9.98□□□□□ -0.81
SYNCRIP-201ENST00000355238 HEATR5AQ86XA9 2040 aa9.98□□□□□ -0.81
SYNCRIP-201ENST00000355238 H3BQ85 93 aa9.98□□□□□ -0.81
SYNCRIP-201ENST00000355238 ODF1Q14990 250 aa9.98□□□□□ -0.81
SYNCRIP-201ENST00000355238 ZFP2Q6ZN57 461 aa9.98□□□□□ -0.81
SYNCRIP-201ENST00000355238 YLPM1P49750 1951 aaKnown RBP9.98□□□□□ -0.81
SYNCRIP-201ENST00000355238 hADV29S1A0JD25 119 aa9.98□□□□□ -0.81
SYNCRIP-201ENST00000355238 GNRH2O43555 120 aa9.97□□□□□ -0.81
SYNCRIP-201ENST00000355238 TOMM6Q96B49 74 aa9.97□□□□□ -0.81
SYNCRIP-201ENST00000355238 IGLV3-9A0A075B6K5 115 aa9.97□□□□□ -0.81
SYNCRIP-201ENST00000355238 FAM167A-AS1Q96KT0 104 aa9.97□□□□□ -0.81
SYNCRIP-201ENST00000355238 TTTY13Q9BZ97 58 aa9.97□□□□□ -0.81
SYNCRIP-201ENST00000355238 Q6ZS92 163 aa9.97□□□□□ -0.81
SYNCRIP-201ENST00000355238 LINC00643Q86TS7 51 aa9.97□□□□□ -0.81
SYNCRIP-201ENST00000355238 RPL39LQ96EH5 51 aaKnown RBP9.97□□□□□ -0.81
SYNCRIP-201ENST00000355238 LINC01619G3V211 115 aa9.96□□□□□ -0.81
SYNCRIP-201ENST00000355238 NDUFV3P56181 108 aaKnown RBP9.96□□□□□ -0.81
SYNCRIP-201ENST00000355238 DIAPH2-AS1Q14236 149 aa9.96□□□□□ -0.81
SYNCRIP-201ENST00000355238 PATE2Q6UY27 113 aa9.96□□□□□ -0.81
SYNCRIP-201ENST00000355238 TRBV6-1A0A0K0K1D8 114 aa9.96□□□□□ -0.82
SYNCRIP-201ENST00000355238 BPESC1Q9GZL8 116 aa9.96□□□□□ -0.82
SYNCRIP-201ENST00000355238 C11orf1Q9H5F2 150 aa9.96□□□□□ -0.82
SYNCRIP-201ENST00000355238 KAAG1Q9UBP8 84 aa9.96□□□□□ -0.82
SYNCRIP-201ENST00000355238 C11orf86A6NJI1 115 aa9.96□□□□□ -0.82
SYNCRIP-201ENST00000355238 LGALS9O00182 355 aa9.96□□□□□ -0.82
SYNCRIP-201ENST00000355238 BAALCQ8WXS3 180 aa9.96□□□□□ -0.82
SYNCRIP-201ENST00000355238 WDR90Q96KV7 1748 aa9.96□□□□□ -0.82
SYNCRIP-201ENST00000355238 DOCK8Q8NF50 2099 aa9.96□□□□□ -0.82
SYNCRIP-201ENST00000355238 RBX1P62877 108 aa9.96□□□□□ -0.82
SYNCRIP-201ENST00000355238 JMJD7-PLA2G4BH0Y9G9 81 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 H3BUA1 57 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 CTRLP40313 264 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 ABCA1O95477 2261 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 IGHV1-69P01742 117 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 CFHR3Q02985 330 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 C5orf47Q569G3 176 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 TIMM17AQ99595 171 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 KMT2EQ8IZD2 1858 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 INTS1Q8N201 2190 aaKnown RBP9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 A0A0J9YXV3 536 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 GATA3P23771 443 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 SND1-IT1Q9HBX3 110 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 MSRB1Q9NZV6 116 aa9.95□□□□□ -0.82
SYNCRIP-201ENST00000355238 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.94□□□□□ -0.82
SYNCRIP-201ENST00000355238 IGKV2-29A2NJV5 120 aaPredicted RBP9.94□□□□□ -0.82
SYNCRIP-201ENST00000355238 CRYGBP07316 175 aa9.94□□□□□ -0.82
SYNCRIP-201ENST00000355238 LY6HO94772 140 aa9.94□□□□□ -0.82
SYNCRIP-201ENST00000355238 KRTAP27-1Q3LI81 207 aa9.94□□□□□ -0.82
SYNCRIP-201ENST00000355238 DENND4AQ7Z401 1863 aa9.94□□□□□ -0.82
SYNCRIP-201ENST00000355238 NDUFA11Q86Y39 141 aa9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 DIDO1Q9BTC0 2240 aaKnown RBP9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 I3L2K1 104 aa9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 FRMD6-AS1P0C7T7 363 aa9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 RUSC1-AS1Q66K80 236 aa9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 SPANXB1Q9NS25 103 aaPredicted RBP9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 UQCRQO14949 82 aa9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 C3orf56Q8N813 242 aa9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 PTH2Q96A98 100 aa9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 PSCAO43653 123 aa9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 C11orf53Q8IXP5 236 aa9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 LINC01356Q8N9X3 169 aa9.93□□□□□ -0.82
SYNCRIP-201ENST00000355238 VWA8A3KMH1 1905 aa9.92□□□□□ -0.82
SYNCRIP-201ENST00000355238 FUSP35637 526 aaKnown RBP eCLIP9.92□□□□□ -0.828e-7■■□□□ 12.3
SYNCRIP-201ENST00000355238 DAD1P61803 113 aa9.92□□□□□ -0.82
SYNCRIP-201ENST00000355238 MT-ATP8P03928 68 aa9.92□□□□□ -0.82
SYNCRIP-201ENST00000355238 OPRPNQ99935 248 aaPredicted RBP9.92□□□□□ -0.82
SYNCRIP-201ENST00000355238 A0A1B0GXF2 115 aa9.92□□□□□ -0.82
SYNCRIP-201ENST00000355238 UBE2DNLQ8IWF7 75 aa9.92□□□□□ -0.82
SYNCRIP-201ENST00000355238 C19orf71A6NCJ1 209 aa9.92□□□□□ -0.82
SYNCRIP-201ENST00000355238 TCF20Q9UGU0 1960 aaKnown RBP9.92□□□□□ -0.82
SYNCRIP-201ENST00000355238 WNK2Q9Y3S1 2297 aa9.91□□□□□ -0.82
SYNCRIP-201ENST00000355238 POLEQ07864 2286 aa9.91□□□□□ -0.82
SYNCRIP-201ENST00000355238 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
SYNCRIP-201ENST00000355238 FGF23Q9GZV9 251 aaPredicted RBP9.91□□□□□ -0.82
SYNCRIP-201ENST00000355238 TRAV4A0A0B4J268 109 aa9.91□□□□□ -0.82
SYNCRIP-201ENST00000355238 TCL1BO95988 128 aa9.91□□□□□ -0.82
SYNCRIP-201ENST00000355238 IGKV1-17P01599 117 aa9.91□□□□□ -0.82
SYNCRIP-201ENST00000355238 C22orf46C9J442 243 aa9.91□□□□□ -0.82
SYNCRIP-201ENST00000355238 LTBP1Q14766 1721 aa9.91□□□□□ -0.82
SYNCRIP-201ENST00000355238 PLXNA2O75051 1894 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms