RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 SMR3AQ99954 134 aa13.93□□□□□ -0.18
TRIM41-202ENST00000351937 C16orf95Q9H693 158 aa13.93□□□□□ -0.18
TRIM41-202ENST00000351937 M0QZ24 198 aa13.93□□□□□ -0.18
TRIM41-202ENST00000351937 SLURP1P55000 103 aa13.93□□□□□ -0.18
TRIM41-202ENST00000351937 GATD1Q8NB37 220 aa13.93□□□□□ -0.18
TRIM41-202ENST00000351937 LINC00614P0C842 121 aa13.92□□□□□ -0.18
TRIM41-202ENST00000351937 HILS1P60008 231 aa13.92□□□□□ -0.18
TRIM41-202ENST00000351937 TRBV7-9A0A0J9YWB2 115 aa13.92□□□□□ -0.18
TRIM41-202ENST00000351937 IGLC6P0CF74 106 aa13.92□□□□□ -0.18
TRIM41-202ENST00000351937 NTF3P20783 257 aa13.92□□□□□ -0.18
TRIM41-202ENST00000351937 WFDC3Q8IUB2 231 aa13.92□□□□□ -0.18
TRIM41-202ENST00000351937 FER1L6-AS1Q8NA97 138 aa13.92□□□□□ -0.18
TRIM41-202ENST00000351937 KLHL30-AS1Q8NEE0 82 aa13.92□□□□□ -0.18
TRIM41-202ENST00000351937 CTRLP40313 264 aa13.91□□□□□ -0.18
TRIM41-202ENST00000351937 FAM19A4Q96LR4 140 aa13.91□□□□□ -0.18
TRIM41-202ENST00000351937 PEMTQ9UBM1 199 aa13.91□□□□□ -0.18
TRIM41-202ENST00000351937 LY6G6DO95868 133 aa13.9□□□□□ -0.18
TRIM41-202ENST00000351937 DEFB1P60022 68 aa13.9□□□□□ -0.18
TRIM41-202ENST00000351937 F6UB75 175 aa13.9□□□□□ -0.18
TRIM41-202ENST00000351937 K7EQG2 157 aa13.9□□□□□ -0.18
TRIM41-202ENST00000351937 C3orf79P0CE67 100 aa13.9□□□□□ -0.18
TRIM41-202ENST00000351937 SNRPD3P62318 126 aaKnown RBP13.9□□□□□ -0.18
TRIM41-202ENST00000351937 MIEN1Q9BRT3 115 aa13.9□□□□□ -0.18
TRIM41-202ENST00000351937 IGKV3D-20A0A0C4DH25 116 aa13.89□□□□□ -0.19
TRIM41-202ENST00000351937 ZFAND2AQ8N6M9 145 aa13.89□□□□□ -0.19
TRIM41-202ENST00000351937 C20orf144Q9BQM9 153 aa13.89□□□□□ -0.19
TRIM41-202ENST00000351937 LOC102724200A0A096LPH7 203 aaPredicted RBP13.89□□□□□ -0.19
TRIM41-202ENST00000351937 ADAMTSL5Q6ZMM2 481 aa13.89□□□□□ -0.19
TRIM41-202ENST00000351937 ZNF493Q6ZR52 646 aa13.89□□□□□ -0.19
TRIM41-202ENST00000351937 OR9G4Q8NGQ1 327 aa13.89□□□□□ -0.19
TRIM41-202ENST00000351937 LINC01006Q8NI28 216 aa13.89□□□□□ -0.19
TRIM41-202ENST00000351937 VAMP8Q9BV40 100 aa13.89□□□□□ -0.19
TRIM41-202ENST00000351937 C11orf21Q9P2W6 132 aa13.89□□□□□ -0.19
TRIM41-202ENST00000351937 STPG4Q8N801 248 aa13.88□□□□□ -0.19
TRIM41-202ENST00000351937 RBX1P62877 108 aa13.88□□□□□ -0.19
TRIM41-202ENST00000351937 PRR9Q5T870 116 aa13.88□□□□□ -0.19
TRIM41-202ENST00000351937 CCL25O15444 150 aa13.87□□□□□ -0.19
TRIM41-202ENST00000351937 HSBP1O75506 76 aa13.87□□□□□ -0.19
TRIM41-202ENST00000351937 RNASEKQ6P5S7 137 aaKnown RBP13.87□□□□□ -0.19
TRIM41-202ENST00000351937 APRG1Q8IVJ8 170 aa13.87□□□□□ -0.19
TRIM41-202ENST00000351937 URB1-AS1Q96HZ7 61 aa13.87□□□□□ -0.19
TRIM41-202ENST00000351937 DUX3Q96PT4 197 aa13.87□□□□□ -0.19
TRIM41-202ENST00000351937 JMJD8Q96S16 334 aa13.87□□□□□ -0.19
TRIM41-202ENST00000351937 CNFNQ9BYD5 112 aa13.87□□□□□ -0.19
TRIM41-202ENST00000351937 CUBNO60494 3623 aa13.87□□□□□ -0.19
TRIM41-202ENST00000351937 TRAV21A0A0B4J279 112 aa13.87□□□□□ -0.19
TRIM41-202ENST00000351937 ZNF688P0C7X2 276 aa13.87□□□□□ -0.19
TRIM41-202ENST00000351937 PSMG4Q5JS54 123 aa13.87□□□□□ -0.19
TRIM41-202ENST00000351937 DLX4Q92988 240 aaPredicted RBP13.87□□□□□ -0.19
TRIM41-202ENST00000351937 CD28P10747 220 aa13.86□□□□□ -0.19
TRIM41-202ENST00000351937 NF1P21359 2839 aa13.85□□□□□ -0.19
TRIM41-202ENST00000351937 OTOGQ6ZRI0 2925 aa13.85□□□□□ -0.19
TRIM41-202ENST00000351937 ERASQ7Z444 233 aa13.85□□□□□ -0.19
TRIM41-202ENST00000351937 M0R2Z0 102 aa13.85□□□□□ -0.19
TRIM41-202ENST00000351937 NDUFA7O95182 113 aa13.85□□□□□ -0.19
TRIM41-202ENST00000351937 TWIST1Q15672 202 aa13.85□□□□□ -0.19
TRIM41-202ENST00000351937 HIVEP2P31629 2446 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 RNF151Q2KHN1 245 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 Q6ZQT7 251 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 MTORP42345 2549 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 MUC21A0A0G2JKD1 596 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 MUC21A0A140T8X8 626 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 J3KRW8 73 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 CSN3P07498 182 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 FHL3Q13643 280 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 MUC21Q5SSG8 566 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 EBLN2Q6P2I7 272 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 RAX2Q96IS3 184 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 TSSC4Q9Y5U2 329 aaPredicted RBP13.84□□□□□ -0.19
TRIM41-202ENST00000351937 NOTCH2Q04721 2471 aa13.84□□□□□ -0.19
TRIM41-202ENST00000351937 COTL1Q14019 142 aa13.83□□□□□ -0.2
TRIM41-202ENST00000351937 C11orf44Q8N8P7 122 aa13.83□□□□□ -0.2
TRIM41-202ENST00000351937 TRAV2A0A0B4J234 112 aa13.83□□□□□ -0.2
TRIM41-202ENST00000351937 A0A0J9YX75 114 aa13.83□□□□□ -0.2
TRIM41-202ENST00000351937 RNASE4P34096 147 aaKnown RBP13.83□□□□□ -0.2
TRIM41-202ENST00000351937 COL5A1-AS1Q5SY13 56 aa13.83□□□□□ -0.2
TRIM41-202ENST00000351937 HIST2H2BDQ6DRA6 164 aa13.83□□□□□ -0.2
TRIM41-202ENST00000351937 ODF3Q96PU9 254 aa13.83□□□□□ -0.2
TRIM41-202ENST00000351937 KLLNB2CW77 178 aa13.82□□□□□ -0.2
TRIM41-202ENST00000351937 PTTG1IPP53801 180 aa13.82□□□□□ -0.2
TRIM41-202ENST00000351937 FAM104BQ5XKR9 115 aa13.82□□□□□ -0.2
TRIM41-202ENST00000351937 PMCHL1Q16048 86 aa13.82□□□□□ -0.2
TRIM41-202ENST00000351937 CITED2Q99967 270 aaPredicted RBP13.82□□□□□ -0.2
TRIM41-202ENST00000351937 OR5AL1P0C617 328 aa13.81□□□□□ -0.2
TRIM41-202ENST00000351937 A0A1W2PRX2 142 aa13.81□□□□□ -0.2
TRIM41-202ENST00000351937 CCL24O00175 119 aa13.81□□□□□ -0.2
TRIM41-202ENST00000351937 SPATA45Q537H7 98 aa13.81□□□□□ -0.2
TRIM41-202ENST00000351937 ATOH7Q8N100 152 aa13.81□□□□□ -0.2
TRIM41-202ENST00000351937 TMEM191AQ9H0A3 160 aa13.81□□□□□ -0.2
TRIM41-202ENST00000351937 C20orf202A1L168 122 aa13.8□□□□□ -0.2
TRIM41-202ENST00000351937 SNAI2O43623 268 aa13.8□□□□□ -0.2
TRIM41-202ENST00000351937 DUSP14O95147 198 aaKnown RBP13.8□□□□□ -0.2
TRIM41-202ENST00000351937 LEPP41159 167 aa13.8□□□□□ -0.2
TRIM41-202ENST00000351937 FOXI2Q6ZQN5 318 aa13.8□□□□□ -0.2
TRIM41-202ENST00000351937 DYNLRB2Q8TF09 96 aa13.8□□□□□ -0.2
TRIM41-202ENST00000351937 MAJINQ3KP22 176 aa13.79□□□□□ -0.2
TRIM41-202ENST00000351937 AMN1Q8IY45 258 aa13.79□□□□□ -0.2
TRIM41-202ENST00000351937 MSRB1Q9NZV6 116 aa13.79□□□□□ -0.2
TRIM41-202ENST00000351937 KIR3DS1Q14943 382 aa13.79□□□□□ -0.2
TRIM41-202ENST00000351937 DEFB114Q30KQ6 69 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms