RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 IGHV4-61A0A0C4DH41 118 aa16.72■□□□□ 0.27
NKX2-4-201ENST00000351817 DPM2O94777 84 aa16.72■□□□□ 0.27
NKX2-4-201ENST00000351817 C9orf118A6NHY6 69 aa16.72■□□□□ 0.27
NKX2-4-201ENST00000351817 SOCS3O14543 225 aa16.72■□□□□ 0.27
NKX2-4-201ENST00000351817 MYOZ3Q8TDC0 251 aa16.72■□□□□ 0.27
NKX2-4-201ENST00000351817 AP1S3Q96PC3 154 aa16.72■□□□□ 0.27
NKX2-4-201ENST00000351817 COL12A1Q99715 3063 aa16.72■□□□□ 0.27
NKX2-4-201ENST00000351817 ACACBO00763 2458 aa16.71■□□□□ 0.27
NKX2-4-201ENST00000351817 ZFAND2AQ8N6M9 145 aa16.71■□□□□ 0.27
NKX2-4-201ENST00000351817 ABCA2Q9BZC7 2435 aa16.71■□□□□ 0.27
NKX2-4-201ENST00000351817 TRAV21A0A0B4J279 112 aa16.7■□□□□ 0.26
NKX2-4-201ENST00000351817 IGHG2P01859 326 aa16.7■□□□□ 0.26
NKX2-4-201ENST00000351817 SRSF1Q07955 248 aaKnown RBP eCLIP16.7■□□□□ 0.26
NKX2-4-201ENST00000351817 KIR3DS1Q14943 382 aa16.7■□□□□ 0.26
NKX2-4-201ENST00000351817 IGKV2D-26A0A0A0MRZ7 120 aa16.7■□□□□ 0.26
NKX2-4-201ENST00000351817 HIGD1BQ9P298 99 aa16.7■□□□□ 0.26
NKX2-4-201ENST00000351817 LY6EQ16553 131 aa16.69■□□□□ 0.26
NKX2-4-201ENST00000351817 SPTAN1Q13813 2472 aaKnown RBP16.69■□□□□ 0.26
NKX2-4-201ENST00000351817 IGHV4-38-2P0DP08 117 aa16.69■□□□□ 0.26
NKX2-4-201ENST00000351817 J3KRW8 73 aa16.68■□□□□ 0.26
NKX2-4-201ENST00000351817 CDKN1BP46527 198 aa16.68■□□□□ 0.26
NKX2-4-201ENST00000351817 C10orf105Q8TEF2 133 aa16.68■□□□□ 0.26
NKX2-4-201ENST00000351817 CST9LQ9H4G1 147 aa16.68■□□□□ 0.26
NKX2-4-201ENST00000351817 A6NDX4 124 aa16.68■□□□□ 0.26
NKX2-4-201ENST00000351817 GAGE10A6NGK3 116 aa16.68■□□□□ 0.26
NKX2-4-201ENST00000351817 CCL19Q99731 98 aa16.67■□□□□ 0.26
NKX2-4-201ENST00000351817 SMIM2Q9BVW6 85 aa16.67■□□□□ 0.26
NKX2-4-201ENST00000351817 H3BUX3 64 aa16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 NDUFS8O00217 210 aa16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 IGHV3-11P01762 117 aa16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 HLA-DRB4P13762 266 aa16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 ASIPP42127 132 aa16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 ZC2HC1BQ5TFG8 222 aa16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 GTF2H5Q6ZYL4 71 aa16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 HLA-DRB4X5D2U9 266 aa16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 VPS13CQ709C8 3753 aa16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 PF4V1P10720 104 aa16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 S100A4P26447 101 aaKnown RBP16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 GTSCR1Q86UQ5 136 aa16.66■□□□□ 0.26
NKX2-4-201ENST00000351817 GAGE12BA1L429 117 aa16.65■□□□□ 0.26
NKX2-4-201ENST00000351817 FAM19A4Q96LR4 140 aa16.65■□□□□ 0.26
NKX2-4-201ENST00000351817 TMEM160Q9NX00 188 aa16.65■□□□□ 0.26
NKX2-4-201ENST00000351817 MRPL35Q9NZE8 188 aaKnown RBP16.65■□□□□ 0.26
NKX2-4-201ENST00000351817 A0A087WX48 190 aa16.65■□□□□ 0.26
NKX2-4-201ENST00000351817 H3BUT2 72 aa16.65■□□□□ 0.26
NKX2-4-201ENST00000351817 M0R381 172 aa16.65■□□□□ 0.26
NKX2-4-201ENST00000351817 MED14OSP0DP75 135 aa16.65■□□□□ 0.26
NKX2-4-201ENST00000351817 RPL11P62913 178 aaKnown RBP16.65■□□□□ 0.26
NKX2-4-201ENST00000351817 KLK15Q9H2R5 256 aa16.65■□□□□ 0.26
NKX2-4-201ENST00000351817 DPH3P1Q9H4G8 78 aa16.65■□□□□ 0.26
NKX2-4-201ENST00000351817 A0A0G2JLM5 398 aa16.64■□□□□ 0.25
NKX2-4-201ENST00000351817 JMJD8Q96S16 334 aa16.64■□□□□ 0.25
NKX2-4-201ENST00000351817 DOPEY1Q5JWR5 2465 aa16.64■□□□□ 0.25
NKX2-4-201ENST00000351817 ANXA2RQ3ZCQ2 193 aa16.64■□□□□ 0.25
NKX2-4-201ENST00000351817 UFSP1Q6NVU6 142 aa16.64■□□□□ 0.25
NKX2-4-201ENST00000351817 CLEC2AQ6UVW9 174 aa16.64■□□□□ 0.25
NKX2-4-201ENST00000351817 PHLDA3Q9Y5J5 127 aa16.64■□□□□ 0.25
NKX2-4-201ENST00000351817 FLNCQ14315 2725 aa16.63■□□□□ 0.25
NKX2-4-201ENST00000351817 TRBV7-9A0A0J9YWB2 115 aa16.63■□□□□ 0.25
NKX2-4-201ENST00000351817 DEFB1P60022 68 aa16.63■□□□□ 0.25
NKX2-4-201ENST00000351817 ORMDL2Q53FV1 153 aa16.63■□□□□ 0.25
NKX2-4-201ENST00000351817 OCIAD2Q56VL3 154 aa16.63■□□□□ 0.25
NKX2-4-201ENST00000351817 APRG1Q8IVJ8 170 aa16.63■□□□□ 0.25
NKX2-4-201ENST00000351817 C20orf78Q9BR46 151 aa16.63■□□□□ 0.25
NKX2-4-201ENST00000351817 CHAC1Q9BUX1 264 aa16.63■□□□□ 0.25
NKX2-4-201ENST00000351817 TTTY13Q9BZ97 58 aa16.63■□□□□ 0.25
NKX2-4-201ENST00000351817 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.62■□□□□ 0.25
NKX2-4-201ENST00000351817 PRB1P04280 392 aa16.62■□□□□ 0.25
NKX2-4-201ENST00000351817 SUMO2P61956 95 aaKnown RBP16.62■□□□□ 0.25
NKX2-4-201ENST00000351817 RHPN1-AS1Q9BWJ2 59 aa16.62■□□□□ 0.25
NKX2-4-201ENST00000351817 USP9XQ93008 2570 aaPredicted RBP16.62■□□□□ 0.25
NKX2-4-201ENST00000351817 RNASE4P34096 147 aaKnown RBP16.62■□□□□ 0.25
NKX2-4-201ENST00000351817 BLCAPP62952 87 aa16.62■□□□□ 0.25
NKX2-4-201ENST00000351817 RASL10AQ92737 203 aa16.62■□□□□ 0.25
NKX2-4-201ENST00000351817 USP24Q9UPU5 2620 aa16.61■□□□□ 0.25
NKX2-4-201ENST00000351817 TRBV25-1A0A075B6N4 114 aa16.61■□□□□ 0.25
NKX2-4-201ENST00000351817 IGLV1-40P01703 118 aa16.61■□□□□ 0.25
NKX2-4-201ENST00000351817 PLNP26678 52 aa16.61■□□□□ 0.25
NKX2-4-201ENST00000351817 RAB37Q96AX2 223 aa16.61■□□□□ 0.25
NKX2-4-201ENST00000351817 TRAV12-1A0A0B4J245 112 aa16.61■□□□□ 0.25
NKX2-4-201ENST00000351817 K7EMI3 77 aa16.61■□□□□ 0.25
NKX2-4-201ENST00000351817 F6UB75 175 aa16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 K7EP34 96 aa16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 SMIM13P0DJ93 91 aa16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 SLC25A16P16260 332 aa16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 GCSHP23434 173 aa16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 C14orf178Q8N769 122 aaPredicted RBP16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 SVIPQ8NHG7 77 aa16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 ATP5J2P56134 94 aa16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 RNF151Q2KHN1 245 aa16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 TM4SF20Q53R12 229 aa16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 BBC3Q96PG8 261 aaPredicted RBP16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 DAZ1Q9NQZ3 744 aaKnown RBP16.6■□□□□ 0.25
NKX2-4-201ENST00000351817 SPRY2O43597 315 aa16.59■□□□□ 0.25
NKX2-4-201ENST00000351817 MSMBP08118 114 aa16.59■□□□□ 0.25
NKX2-4-201ENST00000351817 Q6ZS46 218 aa16.59■□□□□ 0.25
NKX2-4-201ENST00000351817 NAA38Q9BRA0 125 aaKnown RBP16.59■□□□□ 0.25
NKX2-4-201ENST00000351817 IGKV3-7A0A075B6H7 116 aa16.58■□□□□ 0.25
NKX2-4-201ENST00000351817 IGHV4-30-2A0A087WSY4 118 aa16.58■□□□□ 0.25
NKX2-4-201ENST00000351817 H7C1H1 209 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms