RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 DUX5Q96PT3 197 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 PRR25Q96S07 402 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 CYSTM1Q9H1C7 97 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 MGAQ8IWI9 3026 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 UQCRQO14949 82 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
CAPN3-203ENST00000349748 HLA-DMBP28068 263 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 TMEM219Q86XT9 240 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 LINC00526Q96FQ7 95 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 A0A0J9YY99 117 aa8.24□□□□□ -1.09
CAPN3-203ENST00000349748 CGB1A6NKQ9 187 aa8.24□□□□□ -1.09
CAPN3-203ENST00000349748 COX6B1P14854 86 aa8.24□□□□□ -1.09
CAPN3-203ENST00000349748 SRSF2Q01130 221 aaKnown RBP8.24□□□□□ -1.09
CAPN3-203ENST00000349748 EBI3Q14213 229 aa8.24□□□□□ -1.09
CAPN3-203ENST00000349748 LAGE3Q14657 143 aa8.24□□□□□ -1.09
CAPN3-203ENST00000349748 LINC01559Q495D7 138 aa8.24□□□□□ -1.09
CAPN3-203ENST00000349748 GAGE2AQ6NT46 116 aa8.24□□□□□ -1.09
CAPN3-203ENST00000349748 OXTP01178 125 aa8.24□□□□□ -1.09
CAPN3-203ENST00000349748 IGHV3-30P01768 117 aa8.24□□□□□ -1.09
CAPN3-203ENST00000349748 IGHV3-30-5P0DP03 117 aa8.24□□□□□ -1.09
CAPN3-203ENST00000349748 PRR14LQ5THK1 2151 aa8.23□□□□□ -1.09
CAPN3-203ENST00000349748 IGFBPL1Q8WX77 278 aa8.23□□□□□ -1.09
CAPN3-203ENST00000349748 MAGEA5P43359 124 aa8.23□□□□□ -1.09
CAPN3-203ENST00000349748 HERVK_113P61574 105 aa8.23□□□□□ -1.09
CAPN3-203ENST00000349748 TEX36Q5VZQ5 186 aa8.23□□□□□ -1.09
CAPN3-203ENST00000349748 SPINK14Q6IE38 97 aa8.23□□□□□ -1.09
CAPN3-203ENST00000349748 DTX2Q86UW9 622 aa8.23□□□□□ -1.09
CAPN3-203ENST00000349748 TRAV41A0A0B4J266 112 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 TRBV6-1A0A0K0K1D8 114 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 MBD3L4A6NDZ8 208 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-203ENST00000349748 MBD3L3A6NE82 208 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-203ENST00000349748 MBD3L5A6NJ08 208 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-203ENST00000349748 Q1RN00 199 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 PIMREGQ9BSJ6 248 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 SCNM1Q9BWG6 230 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 HES7Q9BYE0 225 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 IGKV1D-17A0A075B6S4 117 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 hADV29S1A0JD25 119 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 ZNF80P51504 273 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-203ENST00000349748 DUX4L9Q6RFH8 374 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-203ENST00000349748 C2orf82Q6UX34 121 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 Q8TAT8 98 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 TRBV19A0A075B6N1 114 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 IGHV3-33P01772 117 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 TNFAIP6P98066 277 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-203ENST00000349748 C17orf58Q2M2W7 97 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 SIGLEC15Q6ZMC9 328 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 ZNF575Q86XF7 245 aa8.22□□□□□ -1.09
CAPN3-203ENST00000349748 IGKV3D-15A0A087WSY6 115 aa8.21□□□□□ -1.09
CAPN3-203ENST00000349748 TRGV3P03979 118 aa8.21□□□□□ -1.09
CAPN3-203ENST00000349748 WT1P19544 449 aaPredicted RBP8.21□□□□□ -1.09
CAPN3-203ENST00000349748 CCL11P51671 97 aa8.21□□□□□ -1.09
CAPN3-203ENST00000349748 ATXN8Q156A1 80 aa8.21□□□□□ -1.09
CAPN3-203ENST00000349748 SMG1Q96Q15 3661 aaKnown RBP8.21□□□□□ -1.1
CAPN3-203ENST00000349748 TRBV10-2A0A0K0K1G8 114 aa8.21□□□□□ -1.1
CAPN3-203ENST00000349748 RPS28P62857 69 aaKnown RBP8.21□□□□□ -1.1
CAPN3-203ENST00000349748 C14orf178Q8N769 122 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-203ENST00000349748 LINC00477Q96M19 166 aa8.21□□□□□ -1.1
CAPN3-203ENST00000349748 SCGB3A1Q96QR1 104 aa8.21□□□□□ -1.1
CAPN3-203ENST00000349748 DSCR8Q96T75 97 aa8.21□□□□□ -1.1
CAPN3-203ENST00000349748 IGKV2-40A0A087WW87 121 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-203ENST00000349748 IGKV2D-40P01614 121 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-203ENST00000349748 ORM1P02763 201 aa8.2□□□□□ -1.1
CAPN3-203ENST00000349748 KLF14Q8TD94 323 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-203ENST00000349748 MED13Q9UHV7 2174 aa8.2□□□□□ -1.1
CAPN3-203ENST00000349748 TRAV12-1A0A0B4J245 112 aa8.2□□□□□ -1.1
CAPN3-203ENST00000349748 SUB1P53999 127 aaKnown RBP eCLIP8.2□□□□□ -1.1
CAPN3-203ENST00000349748 TMEM170BQ5T4T1 132 aa8.2□□□□□ -1.1
CAPN3-203ENST00000349748 IL17RELQ6ZVW7 336 aa8.2□□□□□ -1.1
CAPN3-203ENST00000349748 KALRNO60229 2985 aa8.2□□□□□ -1.1
CAPN3-203ENST00000349748 IQCF6A8MYZ5 107 aa8.19□□□□□ -1.1
CAPN3-203ENST00000349748 TSPEAR-AS2P59090 65 aa8.19□□□□□ -1.1
CAPN3-203ENST00000349748 NEXN-AS1Q8NBZ9 246 aa8.19□□□□□ -1.1
CAPN3-203ENST00000349748 EEF1AKMT3Q96AZ1 226 aa8.19□□□□□ -1.1
CAPN3-203ENST00000349748 TPSG1Q9NRR2 321 aa8.19□□□□□ -1.1
CAPN3-203ENST00000349748 MSRB2Q9Y3D2 182 aa8.19□□□□□ -1.1
CAPN3-203ENST00000349748 OVOL1O14753 267 aa8.19□□□□□ -1.1
CAPN3-203ENST00000349748 Q5XG85 94 aa8.19□□□□□ -1.1
CAPN3-203ENST00000349748 COL27A1Q8IZC6 1860 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-203ENST00000349748 H7C423 109 aa8.19□□□□□ -1.1
CAPN3-203ENST00000349748 DPH3Q96FX2 82 aa8.19□□□□□ -1.1
CAPN3-203ENST00000349748 ZNF256Q9Y2P7 627 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-203ENST00000349748 SPRY2O43597 315 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 DEFB109BQ30KR1 87 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 NRACQ8N912 160 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 TMEM263Q8WUH6 116 aaKnown RBP8.18□□□□□ -1.1
CAPN3-203ENST00000349748 CXXC4Q9H2H0 198 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 TMEM14CQ9P0S9 112 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 IGHG3P01860 377 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 COX7CP15954 63 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 CNTFRP26992 372 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 UCNP55089 124 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 FAM201AQ5SY85 155 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 ZNRF2Q8NHG8 242 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 SMCR5Q8TEV8 140 aa8.18□□□□□ -1.1
CAPN3-203ENST00000349748 ANKRD11Q6UB99 2663 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-203ENST00000349748 TRAV17A0A0B4J275 112 aa8.17□□□□□ -1.1
CAPN3-203ENST00000349748 J3QLI3 93 aa8.17□□□□□ -1.1
CAPN3-203ENST00000349748 P0DMU3 169 aa8.17□□□□□ -1.1
CAPN3-203ENST00000349748 FAM231AP0DMU4 169 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms