RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 MRPS36P82909 103 aaKnown RBP4.6□□□□□ -1.67
RFC1-201ENST00000349703 HRCT1Q6UXD1 115 aa4.6□□□□□ -1.67
RFC1-201ENST00000349703 Q8N976 141 aa4.6□□□□□ -1.67
RFC1-201ENST00000349703 Q9UF83 564 aa4.6□□□□□ -1.67
RFC1-201ENST00000349703 TCRBV4S1A1TA0A5B7 111 aa4.6□□□□□ -1.67
RFC1-201ENST00000349703 C2orf70A6NJV1 201 aa4.6□□□□□ -1.67
RFC1-201ENST00000349703 TET1Q8NFU7 2136 aa4.6□□□□□ -1.67
RFC1-201ENST00000349703 ALPK2Q86TB3 2170 aa4.6□□□□□ -1.67
RFC1-201ENST00000349703 IGHV3-38A0A0C4DH36 116 aa4.6□□□□□ -1.67
RFC1-201ENST00000349703 IQCF6A8MYZ5 107 aa4.6□□□□□ -1.67
RFC1-201ENST00000349703 PSCAO43653 123 aa4.59□□□□□ -1.67
RFC1-201ENST00000349703 IGKCP01834 107 aa4.59□□□□□ -1.67
RFC1-201ENST00000349703 PRM2P04554 102 aa4.59□□□□□ -1.67
RFC1-201ENST00000349703 TFF2Q03403 129 aa4.59□□□□□ -1.67
RFC1-201ENST00000349703 C17orf82Q86X59 251 aaPredicted RBP4.59□□□□□ -1.67
RFC1-201ENST00000349703 CNEP1R1Q8N9A8 125 aa4.59□□□□□ -1.67
RFC1-201ENST00000349703 SNRNP200O75643 2136 aaKnown RBP4.59□□□□□ -1.67
RFC1-201ENST00000349703 CHD3Q12873 2000 aaKnown RBP4.59□□□□□ -1.67
RFC1-201ENST00000349703 USP34Q70CQ2 3546 aa4.59□□□□□ -1.67
RFC1-201ENST00000349703 GGTLC3B5MD39 225 aa4.59□□□□□ -1.67
RFC1-201ENST00000349703 PROP1O75360 226 aa4.59□□□□□ -1.67
RFC1-201ENST00000349703 PRR30Q53SZ7 412 aaPredicted RBP4.59□□□□□ -1.67
RFC1-201ENST00000349703 NXT2Q9NPJ8 142 aaKnown RBP4.59□□□□□ -1.67
RFC1-201ENST00000349703 TMEM131Q92545 1883 aa4.59□□□□□ -1.67
RFC1-201ENST00000349703 COX6A1P12074 109 aa4.59□□□□□ -1.68
RFC1-201ENST00000349703 RPL39P5Q59GN2 51 aa4.59□□□□□ -1.68
RFC1-201ENST00000349703 KLF17Q5JT82 389 aaPredicted RBP4.59□□□□□ -1.68
RFC1-201ENST00000349703 GATA2P23769 480 aaPredicted RBP4.58□□□□□ -1.68
RFC1-201ENST00000349703 SPATA12Q7Z6I5 190 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 NAA38Q9BRA0 125 aaKnown RBP4.58□□□□□ -1.68
RFC1-201ENST00000349703 IGHV3-7P01780 117 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 DEFB116Q30KQ4 102 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 WFDC3Q8IUB2 231 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 LINC00476Q8WZB0 136 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 SHANK2-AS3Q9BTD1 123 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 IGHV5-10-1A0A0J9YXX1 117 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 P0C879 139 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 SLC25A29Q8N8R3 303 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 C20orf203Q8NBC4 194 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 PRO0461Q9UI25 63 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 DOCK9Q9BZ29 2069 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 DNAJC30Q96LL9 226 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 HIGD1BQ9P298 99 aa4.58□□□□□ -1.68
RFC1-201ENST00000349703 DIAPH2-AS1Q14236 149 aa4.57□□□□□ -1.68
RFC1-201ENST00000349703 ZNF418Q8TF45 676 aaPredicted RBP4.57□□□□□ -1.68
RFC1-201ENST00000349703 OVOL2Q9BRP0 275 aa4.57□□□□□ -1.68
RFC1-201ENST00000349703 TDRD6O60522 2096 aaKnown RBP4.57□□□□□ -1.68
RFC1-201ENST00000349703 TCRAP04437 139 aa4.57□□□□□ -1.68
RFC1-201ENST00000349703 CD7P09564 240 aa4.57□□□□□ -1.68
RFC1-201ENST00000349703 B3GALT5-AS1P59052 145 aa4.57□□□□□ -1.68
RFC1-201ENST00000349703 TMEM14BQ9NUH8 114 aa4.57□□□□□ -1.68
RFC1-201ENST00000349703 MYCNOSP40205 109 aa4.57□□□□□ -1.68
RFC1-201ENST00000349703 NEGR1Q7Z3B1 354 aa4.57□□□□□ -1.68
RFC1-201ENST00000349703 KLK9Q9UKQ9 250 aa4.57□□□□□ -1.68
RFC1-201ENST00000349703 MUC22E2RYF6 1773 aaPredicted RBP4.57□□□□□ -1.68
RFC1-201ENST00000349703 TM4SF5O14894 197 aa4.57□□□□□ -1.68
RFC1-201ENST00000349703 ATP6V0E2Q8NHE4 81 aa4.57□□□□□ -1.68
RFC1-201ENST00000349703 KLF14Q8TD94 323 aaPredicted RBP4.57□□□□□ -1.68
RFC1-201ENST00000349703 IGLV4-69A0A075B6H9 119 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 ZNF826PQ6ZT77 177 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 CEND1Q8N111 149 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 ZCCHC24Q8N2G6 241 aaKnown RBP4.56□□□□□ -1.68
RFC1-201ENST00000349703 PPDPFLQ8WWR9 84 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 TRGV5A0A0B4J1U4 118 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 PSPHP1O15172 72 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 PLNP26678 52 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 C4orf26Q17RF5 130 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 ODF3L2Q3SX64 289 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 Q6ZPA2 131 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 Q86TA4 180 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 SAA2P0DJI9 122 aaPredicted RBP4.56□□□□□ -1.68
RFC1-201ENST00000349703 C11orf45Q8TAV5 145 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 RALGAPA1Q6GYQ0 2036 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 LY6G6EA0A0G2JKS1 128 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 A0A1B0GXF2 115 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 D6R8Y8 96 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 K7ERJ3 54 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 MSMBP08118 114 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 PVRIGQ6DKI7 326 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 KLHL30-AS1Q8NEE0 82 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 TRGV9Q99603 122 aa4.56□□□□□ -1.68
RFC1-201ENST00000349703 IGHV1-3A0A0C4DH29 117 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 CXCL12P48061 93 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 FAM74A4Q5TZK3 123 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 C11orf71Q6IPW1 123 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 UFSP1Q6NVU6 142 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 TMSB15BA0A087X1C1 80 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 IGHV3-66A0A0C4DH42 116 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 TRGV3P03979 118 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 LYPD1Q8N2G4 141 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 FAM216BQ8N7L0 139 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 OR10J6PQ8NGY7 276 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 TMEM14CQ9P0S9 112 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 SPAG17Q6Q759 2223 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 DOCK11Q5JSL3 2073 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 ATG2BQ96BY7 2078 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 NPYP01303 97 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 LTAP01374 205 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 TFF1P04155 84 aa4.55□□□□□ -1.68
RFC1-201ENST00000349703 IGKV4-1P06312 121 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms