RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 MBD3L3A6NE82 208 aaPredicted RBP11.77□□□□□ -0.53
PTBP1-201ENST00000349038 MBD3L5A6NJ08 208 aaPredicted RBP11.77□□□□□ -0.53
PTBP1-201ENST00000349038 MBD3L2Q8NHZ7 208 aaPredicted RBP11.77□□□□□ -0.53
PTBP1-201ENST00000349038 CFHR4Q92496 578 aa11.77□□□□□ -0.53
PTBP1-201ENST00000349038 RPL32P62910 135 aaKnown RBP11.76□□□□□ -0.53
PTBP1-201ENST00000349038 TEN1Q86WV5 123 aa11.76□□□□□ -0.53
PTBP1-201ENST00000349038 GAGE12JA6NER3 117 aa11.76□□□□□ -0.53
PTBP1-201ENST00000349038 CDX4O14627 284 aaPredicted RBP11.76□□□□□ -0.53
PTBP1-201ENST00000349038 GAGE7O76087 117 aa11.76□□□□□ -0.53
PTBP1-201ENST00000349038 GAGE12FP0CL80 117 aa11.76□□□□□ -0.53
PTBP1-201ENST00000349038 GAGE12GP0CL81 117 aa11.76□□□□□ -0.53
PTBP1-201ENST00000349038 GAGE12IP0CL82 117 aa11.76□□□□□ -0.53
PTBP1-201ENST00000349038 DEFB1P60022 68 aa11.76□□□□□ -0.53
PTBP1-201ENST00000349038 GAGE4Q13068 117 aa11.76□□□□□ -0.53
PTBP1-201ENST00000349038 TRAV17A0A0B4J275 112 aa11.75□□□□□ -0.53
PTBP1-201ENST00000349038 FCN3O75636 299 aa11.75□□□□□ -0.53
PTBP1-201ENST00000349038 S100A4P26447 101 aaKnown RBP11.75□□□□□ -0.53
PTBP1-201ENST00000349038 C5orf64Q2M2E5 130 aa11.75□□□□□ -0.53
PTBP1-201ENST00000349038 TRBV7-3A0A075B6L6 115 aa11.75□□□□□ -0.53
PTBP1-201ENST00000349038 A6NJY4 79 aa11.75□□□□□ -0.53
PTBP1-201ENST00000349038 DYNAPQ8N1N2 210 aa11.75□□□□□ -0.53
PTBP1-201ENST00000349038 RPL39LQ96EH5 51 aaKnown RBP11.75□□□□□ -0.53
PTBP1-201ENST00000349038 COL12A1Q99715 3063 aa11.75□□□□□ -0.53
PTBP1-201ENST00000349038 A0A087WX48 190 aa11.75□□□□□ -0.53
PTBP1-201ENST00000349038 FABP5P3A8MUU1 101 aa11.75□□□□□ -0.53
PTBP1-201ENST00000349038 TRAV2A0A0B4J234 112 aa11.74□□□□□ -0.53
PTBP1-201ENST00000349038 PAX8Q06710 450 aa11.74□□□□□ -0.53
PTBP1-201ENST00000349038 PRSS2P07478 247 aa11.74□□□□□ -0.53
PTBP1-201ENST00000349038 HOXB4P17483 251 aaPredicted RBP11.74□□□□□ -0.53
PTBP1-201ENST00000349038 Q6ZS46 218 aa11.74□□□□□ -0.53
PTBP1-201ENST00000349038 LINC00311Q8N616 119 aa11.74□□□□□ -0.53
PTBP1-201ENST00000349038 C14orf178Q8N769 122 aaPredicted RBP11.74□□□□□ -0.53
PTBP1-201ENST00000349038 U3KQK5 164 aa11.74□□□□□ -0.53
PTBP1-201ENST00000349038 GATD1Q8NB37 220 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 OR11H6Q8NGC7 330 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 DYNLRB1Q9NP97 96 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 F8VRH5 84 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 H7C1H1 209 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 SLC25A20O43772 301 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 GFRALQ6UXV0 394 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 C8orf31Q8N9H6 132 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 TEX49A0A1B0GTD5 131 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 ADARB2-AS1A8MUL3 147 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 H3BRN7 92 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 MRPL23Q16540 153 aaKnown RBP11.73□□□□□ -0.53
PTBP1-201ENST00000349038 MEIG1Q5JSS6 88 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 Q8N8P6 123 aa11.73□□□□□ -0.53
PTBP1-201ENST00000349038 OTOGLQ3ZCN5 2332 aa11.72□□□□□ -0.53
PTBP1-201ENST00000349038 TRBV6-1A0A0K0K1D8 114 aa11.72□□□□□ -0.53
PTBP1-201ENST00000349038 ID1P41134 155 aa11.72□□□□□ -0.53
PTBP1-201ENST00000349038 CITED1Q99966 193 aa11.72□□□□□ -0.53
PTBP1-201ENST00000349038 NDUFV3P56181 108 aaKnown RBP11.72□□□□□ -0.53
PTBP1-201ENST00000349038 SRSF1Q07955 248 aaKnown RBP eCLIP11.72□□□□□ -0.532e-10■■■□□ 18.2
PTBP1-201ENST00000349038 DLX6P56179 175 aa11.71□□□□□ -0.53
PTBP1-201ENST00000349038 I3L2K1 104 aa11.71□□□□□ -0.53
PTBP1-201ENST00000349038 K7EIM0 57 aa11.71□□□□□ -0.53
PTBP1-201ENST00000349038 PLNP26678 52 aa11.71□□□□□ -0.53
PTBP1-201ENST00000349038 ZNF292O60281 2723 aa11.71□□□□□ -0.54
PTBP1-201ENST00000349038 ANKHD1Q8IWZ3 2542 aaKnown RBP11.71□□□□□ -0.54
PTBP1-201ENST00000349038 RPL11P62913 178 aaKnown RBP11.71□□□□□ -0.54
PTBP1-201ENST00000349038 TMEM14CQ9P0S9 112 aa11.71□□□□□ -0.54
PTBP1-201ENST00000349038 TEX22C9J3V5 150 aa11.7□□□□□ -0.54
PTBP1-201ENST00000349038 F5H697 171 aa11.7□□□□□ -0.54
PTBP1-201ENST00000349038 NHLRC4P0CG21 123 aaPredicted RBP11.7□□□□□ -0.54
PTBP1-201ENST00000349038 IFITM1P13164 125 aa11.7□□□□□ -0.54
PTBP1-201ENST00000349038 C15orf53Q8NAA6 179 aa11.7□□□□□ -0.54
PTBP1-201ENST00000349038 CHCHD5Q9BSY4 110 aa11.7□□□□□ -0.54
PTBP1-201ENST00000349038 ZMAT4Q9H898 229 aa11.7□□□□□ -0.54
PTBP1-201ENST00000349038 TLN1Q9Y490 2541 aaKnown RBP11.7□□□□□ -0.54
PTBP1-201ENST00000349038 NDPQ00604 133 aa11.7□□□□□ -0.54
PTBP1-201ENST00000349038 C11orf21Q9P2W6 132 aa11.7□□□□□ -0.54
PTBP1-201ENST00000349038 IGHV1-3A0A0C4DH29 117 aa11.69□□□□□ -0.54
PTBP1-201ENST00000349038 TIMM23O14925 209 aa11.69□□□□□ -0.54
PTBP1-201ENST00000349038 IGHV1-8P0DP01 117 aa11.69□□□□□ -0.54
PTBP1-201ENST00000349038 C2orf66Q6UXQ4 117 aa11.69□□□□□ -0.54
PTBP1-201ENST00000349038 FAM215AQ9Y5M1 114 aa11.69□□□□□ -0.54
PTBP1-201ENST00000349038 LY6HO94772 140 aa11.69□□□□□ -0.54
PTBP1-201ENST00000349038 IGKV3D-20A0A0C4DH25 116 aa11.68□□□□□ -0.54
PTBP1-201ENST00000349038 ZNF56Q15929 161 aa11.68□□□□□ -0.54
PTBP1-201ENST00000349038 PTPRQQ9UMZ3 2332 aa11.68□□□□□ -0.54
PTBP1-201ENST00000349038 DUSP14O95147 198 aaKnown RBP11.68□□□□□ -0.54
PTBP1-201ENST00000349038 IGF1P05019 195 aa11.68□□□□□ -0.54
PTBP1-201ENST00000349038 CRYGBP07316 175 aa11.68□□□□□ -0.54
PTBP1-201ENST00000349038 NDUFA11Q86Y39 141 aa11.68□□□□□ -0.54
PTBP1-201ENST00000349038 ANKRD11Q6UB99 2663 aaPredicted RBP11.68□□□□□ -0.54
PTBP1-201ENST00000349038 PIEZO1Q92508 2521 aa11.68□□□□□ -0.54
PTBP1-201ENST00000349038 K7EM74 188 aa11.67□□□□□ -0.54
PTBP1-201ENST00000349038 IGLC6P0CF74 106 aa11.67□□□□□ -0.54
PTBP1-201ENST00000349038 NUP37Q8NFH4 326 aa11.67□□□□□ -0.54
PTBP1-201ENST00000349038 TNFRSF13BO14836 293 aaPredicted RBP11.67□□□□□ -0.54
PTBP1-201ENST00000349038 HERVK_113P61574 105 aa11.67□□□□□ -0.54
PTBP1-201ENST00000349038 RPL39P62891 51 aaKnown RBP11.67□□□□□ -0.54
PTBP1-201ENST00000349038 TAL2Q16559 108 aa11.67□□□□□ -0.54
PTBP1-201ENST00000349038 ECSCRQ19T08 205 aa11.67□□□□□ -0.54
PTBP1-201ENST00000349038 RS1O15537 224 aa11.66□□□□□ -0.54
PTBP1-201ENST00000349038 ADIPOQQ15848 244 aa11.66□□□□□ -0.54
PTBP1-201ENST00000349038 FAM74A4Q5TZK3 123 aa11.66□□□□□ -0.54
PTBP1-201ENST00000349038 TMEM190Q8WZ59 177 aa11.66□□□□□ -0.54
PTBP1-201ENST00000349038 DUX3Q96PT4 197 aa11.66□□□□□ -0.54
PTBP1-201ENST00000349038 TRAV12-3A0A0B4J271 114 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms