RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 TRBV7-9A0A0J9YWB2 115 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 ARL3P36405 182 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 TTC32Q5I0X7 151 aa11.82□□□□□ -0.52
LMNA-201ENST00000347559 TRAV12-1A0A0B4J245 112 aa11.81□□□□□ -0.52
LMNA-201ENST00000347559 TRAV17A0A0B4J275 112 aa11.81□□□□□ -0.52
LMNA-201ENST00000347559 CD7P09564 240 aa11.81□□□□□ -0.52
LMNA-201ENST00000347559 TDHQ8IZJ6 230 aa11.81□□□□□ -0.52
LMNA-201ENST00000347559 VCX2Q9H322 139 aa11.81□□□□□ -0.52
LMNA-201ENST00000347559 C21orf62Q9NYP8 219 aa11.81□□□□□ -0.52
LMNA-201ENST00000347559 CRLF1O75462 422 aa11.81□□□□□ -0.52
LMNA-201ENST00000347559 IGLV1-47P01700 117 aa11.81□□□□□ -0.52
LMNA-201ENST00000347559 NEXN-AS1Q8NBZ9 246 aa11.81□□□□□ -0.52
LMNA-201ENST00000347559 RASL10AQ92737 203 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 MBD3L4A6NDZ8 208 aaPredicted RBP11.8□□□□□ -0.52
LMNA-201ENST00000347559 MBD3L3A6NE82 208 aaPredicted RBP11.8□□□□□ -0.52
LMNA-201ENST00000347559 GAGE12JA6NER3 117 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 MBD3L5A6NJ08 208 aaPredicted RBP11.8□□□□□ -0.52
LMNA-201ENST00000347559 M0R381 172 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 GAGE7O76087 117 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 GAGE12FP0CL80 117 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 GAGE12GP0CL81 117 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 GAGE12IP0CL82 117 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 CRIP2P52943 208 aaPredicted RBP11.8□□□□□ -0.52
LMNA-201ENST00000347559 NDUFV3P56181 108 aaKnown RBP11.8□□□□□ -0.52
LMNA-201ENST00000347559 GAGE4Q13068 117 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 TRPT1Q86TN4 253 aaKnown RBP11.8□□□□□ -0.52
LMNA-201ENST00000347559 MBD3L2Q8NHZ7 208 aaPredicted RBP11.8□□□□□ -0.52
LMNA-201ENST00000347559 BAALCQ8WXS3 180 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 IGHV3-49A0A0A0MS15 119 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 SLC25A20O43772 301 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 C2orf66Q6UXQ4 117 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 C1orf122Q6ZSJ8 110 aa11.8□□□□□ -0.52
LMNA-201ENST00000347559 RPL39LQ96EH5 51 aaKnown RBP11.8□□□□□ -0.52
LMNA-201ENST00000347559 GVINP1Q7Z2Y8 2422 aa11.79□□□□□ -0.52
LMNA-201ENST00000347559 COL27A1Q8IZC6 1860 aaPredicted RBP11.79□□□□□ -0.52
LMNA-201ENST00000347559 Q6ZS46 218 aa11.79□□□□□ -0.52
LMNA-201ENST00000347559 TNFRSF13BO14836 293 aaPredicted RBP11.79□□□□□ -0.52
LMNA-201ENST00000347559 CFC1BP0CG36 223 aa11.79□□□□□ -0.52
LMNA-201ENST00000347559 CFC1P0CG37 223 aa11.79□□□□□ -0.52
LMNA-201ENST00000347559 FANCD2OSQ96PS1 177 aa11.79□□□□□ -0.52
LMNA-201ENST00000347559 CITED1Q99966 193 aa11.79□□□□□ -0.52
LMNA-201ENST00000347559 DYNLRB1Q9NP97 96 aa11.79□□□□□ -0.52
LMNA-201ENST00000347559 TECTAO75443 2155 aa11.78□□□□□ -0.52
LMNA-201ENST00000347559 LYNX1G3V0Z9 82 aa11.78□□□□□ -0.52
LMNA-201ENST00000347559 LYNX1P0DP58 116 aa11.78□□□□□ -0.52
LMNA-201ENST00000347559 AGPAT4-IT1Q9H0P7 198 aa11.78□□□□□ -0.52
LMNA-201ENST00000347559 ARHGAP32A7KAX9 2087 aa11.78□□□□□ -0.52
LMNA-201ENST00000347559 ORMDL2Q53FV1 153 aa11.78□□□□□ -0.52
LMNA-201ENST00000347559 ASCL5Q7RTU5 278 aa11.78□□□□□ -0.52
LMNA-201ENST00000347559 PSMG3-AS1Q96PY0 264 aa11.78□□□□□ -0.52
LMNA-201ENST00000347559 FAM215AQ9Y5M1 114 aa11.78□□□□□ -0.52
LMNA-201ENST00000347559 IGHV7-4-1A0A0J9YVY3 117 aa11.77□□□□□ -0.52
LMNA-201ENST00000347559 F8W735 103 aaPredicted RBP11.77□□□□□ -0.52
LMNA-201ENST00000347559 RHODO00212 210 aa11.77□□□□□ -0.52
LMNA-201ENST00000347559 MGPP08493 103 aa11.77□□□□□ -0.52
LMNA-201ENST00000347559 SUMO2P61956 95 aaKnown RBP11.77□□□□□ -0.52
LMNA-201ENST00000347559 SRSF2Q01130 221 aaKnown RBP11.77□□□□□ -0.52
LMNA-201ENST00000347559 TOMM6Q96B49 74 aa11.77□□□□□ -0.52
LMNA-201ENST00000347559 MED13LQ71F56 2210 aa11.77□□□□□ -0.52
LMNA-201ENST00000347559 ABCA4P78363 2273 aa11.77□□□□□ -0.53
LMNA-201ENST00000347559 NBR2O15453 112 aa11.77□□□□□ -0.53
LMNA-201ENST00000347559 RPL32P62910 135 aaKnown RBP11.77□□□□□ -0.53
LMNA-201ENST00000347559 NTN5Q8WTR8 489 aaPredicted RBP11.77□□□□□ -0.53
LMNA-201ENST00000347559 A0A0J9YY99 117 aa11.76□□□□□ -0.53
LMNA-201ENST00000347559 BSPH1Q075Z2 132 aa11.76□□□□□ -0.53
LMNA-201ENST00000347559 C10orf126Q8N4M7 172 aa11.76□□□□□ -0.53
LMNA-201ENST00000347559 IFITM1P13164 125 aa11.76□□□□□ -0.53
LMNA-201ENST00000347559 C14orf178Q8N769 122 aaPredicted RBP11.76□□□□□ -0.53
LMNA-201ENST00000347559 C11orf86A6NJI1 115 aa11.75□□□□□ -0.53
LMNA-201ENST00000347559 COX6B1P14854 86 aa11.75□□□□□ -0.53
LMNA-201ENST00000347559 SRD5A1P18405 259 aa11.75□□□□□ -0.53
LMNA-201ENST00000347559 BEX4Q9NWD9 120 aaPredicted RBP11.75□□□□□ -0.53
LMNA-201ENST00000347559 PRO1854Q9UHT4 67 aa11.75□□□□□ -0.53
LMNA-201ENST00000347559 IGLV11-55A0A075B6I3 123 aa11.75□□□□□ -0.53
LMNA-201ENST00000347559 TMEM170BQ5T4T1 132 aa11.75□□□□□ -0.53
LMNA-201ENST00000347559 FAM159AQ6UWV7 190 aa11.75□□□□□ -0.53
LMNA-201ENST00000347559 CTSGP08311 255 aa11.75□□□□□ -0.53
LMNA-201ENST00000347559 Q1RN00 199 aa11.75□□□□□ -0.53
LMNA-201ENST00000347559 C3orf56Q8N813 242 aa11.75□□□□□ -0.53
LMNA-201ENST00000347559 SCGB2A1O75556 95 aa11.74□□□□□ -0.53
LMNA-201ENST00000347559 DUSP14O95147 198 aaKnown RBP11.74□□□□□ -0.53
LMNA-201ENST00000347559 SBSPONQ8IVN8 264 aa11.74□□□□□ -0.53
LMNA-201ENST00000347559 IGHV4-39P01824 125 aa11.74□□□□□ -0.53
LMNA-201ENST00000347559 NUP37Q8NFH4 326 aa11.74□□□□□ -0.53
LMNA-201ENST00000347559 HERVK_113P61574 105 aa11.73□□□□□ -0.53
LMNA-201ENST00000347559 ZNF672Q499Z4 452 aaPredicted RBP11.73□□□□□ -0.53
LMNA-201ENST00000347559 S100A4P26447 101 aaKnown RBP11.73□□□□□ -0.53
LMNA-201ENST00000347559 NDPQ00604 133 aa11.73□□□□□ -0.53
LMNA-201ENST00000347559 DEFB109BQ30KR1 87 aa11.73□□□□□ -0.53
LMNA-201ENST00000347559 SLC50A1Q9BRV3 221 aa11.73□□□□□ -0.53
LMNA-201ENST00000347559 IGHV3-30P01768 117 aa11.73□□□□□ -0.53
LMNA-201ENST00000347559 IGHV3-30-5P0DP03 117 aa11.73□□□□□ -0.53
LMNA-201ENST00000347559 CD59P13987 128 aa11.72□□□□□ -0.53
LMNA-201ENST00000347559 Q8N1Y9 231 aa11.72□□□□□ -0.53
LMNA-201ENST00000347559 MSRB2Q9Y3D2 182 aa11.72□□□□□ -0.53
LMNA-201ENST00000347559 MGAQ8IWI9 3026 aa11.72□□□□□ -0.53
LMNA-201ENST00000347559 TSPEAR-AS2P59090 65 aa11.72□□□□□ -0.53
LMNA-201ENST00000347559 RNASE6Q93091 150 aaKnown RBP11.72□□□□□ -0.53
LMNA-201ENST00000347559 TEX49A0A1B0GTD5 131 aa11.71□□□□□ -0.53
LMNA-201ENST00000347559 C15orf53Q8NAA6 179 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms