RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 IGHV1OR15-1A0A075B7D0 117 aa13.76□□□□□ -0.21
CHMP4A-201ENST00000347519 ZNF705GA8MUZ8 300 aaPredicted RBP13.76□□□□□ -0.21
CHMP4A-201ENST00000347519 GNRH2O43555 120 aa13.76□□□□□ -0.21
CHMP4A-201ENST00000347519 GATCO43716 136 aaKnown RBP13.76□□□□□ -0.21
CHMP4A-201ENST00000347519 P01737 135 aa13.76□□□□□ -0.21
CHMP4A-201ENST00000347519 LINC01559Q495D7 138 aa13.76□□□□□ -0.21
CHMP4A-201ENST00000347519 OR10G8Q8NGN5 311 aa13.76□□□□□ -0.21
CHMP4A-201ENST00000347519 GOLT1BQ9Y3E0 138 aa13.76□□□□□ -0.21
CHMP4A-201ENST00000347519 V9GYV3 84 aa13.76□□□□□ -0.21
CHMP4A-201ENST00000347519 GRIFINA4D1Z8 144 aa13.75□□□□□ -0.21
CHMP4A-201ENST00000347519 B4DEV8 164 aa13.75□□□□□ -0.21
CHMP4A-201ENST00000347519 H7BYZ3 331 aa13.75□□□□□ -0.21
CHMP4A-201ENST00000347519 GZMBP10144 247 aa13.75□□□□□ -0.21
CHMP4A-201ENST00000347519 AZU1P20160 251 aa13.75□□□□□ -0.21
CHMP4A-201ENST00000347519 OR2D3Q8NGH3 330 aa13.75□□□□□ -0.21
CHMP4A-201ENST00000347519 TMEM208Q9BTX3 173 aa13.75□□□□□ -0.21
CHMP4A-201ENST00000347519 RPP21Q9H633 154 aaKnown RBP13.75□□□□□ -0.21
CHMP4A-201ENST00000347519 C7orf77A4D0Y5 90 aa13.74□□□□□ -0.21
CHMP4A-201ENST00000347519 TMEM189A5PLL7 270 aa13.74□□□□□ -0.21
CHMP4A-201ENST00000347519 TYMSP04818 313 aa13.74□□□□□ -0.21
CHMP4A-201ENST00000347519 HTN1P15515 57 aa13.74□□□□□ -0.21
CHMP4A-201ENST00000347519 Q6ZWC4 215 aa13.74□□□□□ -0.21
CHMP4A-201ENST00000347519 SVBPQ8N300 66 aa13.74□□□□□ -0.21
CHMP4A-201ENST00000347519 RNF183Q96D59 192 aa13.74□□□□□ -0.21
CHMP4A-201ENST00000347519 X6R8D5 127 aa13.74□□□□□ -0.21
CHMP4A-201ENST00000347519 TDRG1Q3Y452 100 aa13.73□□□□□ -0.21
CHMP4A-201ENST00000347519 FAM159AQ6UWV7 190 aa13.73□□□□□ -0.21
CHMP4A-201ENST00000347519 TMEM256Q8N2U0 113 aa13.73□□□□□ -0.21
CHMP4A-201ENST00000347519 RCHY1Q96PM5 261 aa13.73□□□□□ -0.21
CHMP4A-201ENST00000347519 PYGO2Q9BRQ0 406 aa13.73□□□□□ -0.21
CHMP4A-201ENST00000347519 LINC00467Q9BRT7 94 aa13.73□□□□□ -0.21
CHMP4A-201ENST00000347519 NBEAL2Q6ZNJ1 2754 aa13.73□□□□□ -0.21
CHMP4A-201ENST00000347519 C15orf54Q8N8G6 183 aa13.72□□□□□ -0.21
CHMP4A-201ENST00000347519 OVOL2Q9BRP0 275 aa13.72□□□□□ -0.21
CHMP4A-201ENST00000347519 PRKDCP78527 4128 aaKnown RBP13.72□□□□□ -0.21
CHMP4A-201ENST00000347519 CBY3A6NI87 242 aa13.71□□□□□ -0.21
CHMP4A-201ENST00000347519 SPRY2O43597 315 aa13.71□□□□□ -0.21
CHMP4A-201ENST00000347519 SNAPINO95295 136 aa13.71□□□□□ -0.21
CHMP4A-201ENST00000347519 MT-ND4LP03901 98 aa13.71□□□□□ -0.21
CHMP4A-201ENST00000347519 MDFICQ9P1T7 246 aa13.71□□□□□ -0.21
CHMP4A-201ENST00000347519 OR11H2Q8NH07 326 aa13.71□□□□□ -0.22
CHMP4A-201ENST00000347519 RPS10P5Q9NQ39 176 aa13.71□□□□□ -0.22
CHMP4A-201ENST00000347519 IGHV3-16A0A0C4DH30 117 aa13.7□□□□□ -0.22
CHMP4A-201ENST00000347519 RHEBQ15382 184 aa13.7□□□□□ -0.22
CHMP4A-201ENST00000347519 GTSF1Q8WW33 167 aa13.7□□□□□ -0.22
CHMP4A-201ENST00000347519 ANAPC16Q96DE5 110 aa13.7□□□□□ -0.22
CHMP4A-201ENST00000347519 KCNS1Q96KK3 526 aa13.7□□□□□ -0.22
CHMP4A-201ENST00000347519 RNASE3P12724 160 aaKnown RBP13.69□□□□□ -0.22
CHMP4A-201ENST00000347519 TCL1AP56279 114 aa13.69□□□□□ -0.22
CHMP4A-201ENST00000347519 CT83Q5H943 113 aa13.69□□□□□ -0.22
CHMP4A-201ENST00000347519 C11orf72Q8NBR9 251 aa13.69□□□□□ -0.22
CHMP4A-201ENST00000347519 TM2D3Q9BRN9 247 aa13.69□□□□□ -0.22
CHMP4A-201ENST00000347519 PLAC8L1A1L4L8 177 aa13.68□□□□□ -0.22
CHMP4A-201ENST00000347519 PPP1R2P9O14990 202 aa13.68□□□□□ -0.22
CHMP4A-201ENST00000347519 S100A1P23297 94 aa13.68□□□□□ -0.22
CHMP4A-201ENST00000347519 RPS20P60866 119 aaKnown RBP13.68□□□□□ -0.22
CHMP4A-201ENST00000347519 DNLZQ5SXM8 178 aa13.68□□□□□ -0.22
CHMP4A-201ENST00000347519 RNASE8Q8TDE3 154 aaKnown RBP13.68□□□□□ -0.22
CHMP4A-201ENST00000347519 NEU1Q99519 415 aa13.68□□□□□ -0.22
CHMP4A-201ENST00000347519 GSN-AS1Q9NRJ2 163 aa13.68□□□□□ -0.22
CHMP4A-201ENST00000347519 TP53TG1Q9Y2A0 90 aa13.68□□□□□ -0.22
CHMP4A-201ENST00000347519 MUC4Q99102 2169 aa13.68□□□□□ -0.22
CHMP4A-201ENST00000347519 A8MWL6 223 aa13.67□□□□□ -0.22
CHMP4A-201ENST00000347519 H3BVH4 76 aa13.67□□□□□ -0.22
CHMP4A-201ENST00000347519 CXCL1P09341 107 aa13.67□□□□□ -0.22
CHMP4A-201ENST00000347519 IGLC6P0CF74 106 aa13.67□□□□□ -0.22
CHMP4A-201ENST00000347519 RRN3P1Q2M238 152 aa13.67□□□□□ -0.22
CHMP4A-201ENST00000347519 TSKUQ8WUA8 353 aa13.67□□□□□ -0.22
CHMP4A-201ENST00000347519 CTDSP1Q9GZU7 261 aa13.67□□□□□ -0.22
CHMP4A-201ENST00000347519 TIMM8BQ9Y5J9 83 aaPredicted RBP13.67□□□□□ -0.22
CHMP4A-201ENST00000347519 TRGV11A0A075B6L2 103 aa13.66□□□□□ -0.22
CHMP4A-201ENST00000347519 A0A087WWC5 75 aa13.66□□□□□ -0.22
CHMP4A-201ENST00000347519 ARMS2P0C7Q2 107 aa13.66□□□□□ -0.22
CHMP4A-201ENST00000347519 ASIPP42127 132 aa13.66□□□□□ -0.22
CHMP4A-201ENST00000347519 B9D2Q9BPU9 175 aa13.66□□□□□ -0.22
CHMP4A-201ENST00000347519 IL36BQ9NZH7 164 aa13.66□□□□□ -0.22
CHMP4A-201ENST00000347519 IGHV4-28A0A0C4DH34 117 aa13.65□□□□□ -0.22
CHMP4A-201ENST00000347519 MUC21A0A0G2JKD1 596 aa13.65□□□□□ -0.22
CHMP4A-201ENST00000347519 MUC21A0A140T8X8 626 aa13.65□□□□□ -0.22
CHMP4A-201ENST00000347519 SMIM27A0A1W2PRY6 76 aa13.65□□□□□ -0.22
CHMP4A-201ENST00000347519 DEFB4AO15263 64 aa13.65□□□□□ -0.22
CHMP4A-201ENST00000347519 SCO1O75880 301 aa13.65□□□□□ -0.22
CHMP4A-201ENST00000347519 Q8NAQ8 132 aa13.65□□□□□ -0.22
CHMP4A-201ENST00000347519 IL17DQ8TAD2 202 aa13.65□□□□□ -0.22
CHMP4A-201ENST00000347519 TMEM263Q8WUH6 116 aaKnown RBP13.65□□□□□ -0.22
CHMP4A-201ENST00000347519 C9orf85Q96MD7 179 aa13.65□□□□□ -0.22
CHMP4A-201ENST00000347519 SMIM9A6NGZ8 99 aa13.64□□□□□ -0.23
CHMP4A-201ENST00000347519 S100A4P26447 101 aaKnown RBP13.64□□□□□ -0.23
CHMP4A-201ENST00000347519 FAM3BP58499 235 aaPredicted RBP13.64□□□□□ -0.23
CHMP4A-201ENST00000347519 FER1L6-AS1Q8NA97 138 aa13.64□□□□□ -0.23
CHMP4A-201ENST00000347519 PGLYRP4Q96LB8 373 aa13.64□□□□□ -0.23
CHMP4A-201ENST00000347519 SPATA25Q9BR10 227 aa13.64□□□□□ -0.23
CHMP4A-201ENST00000347519 TPPP3Q9BW30 176 aa13.64□□□□□ -0.23
CHMP4A-201ENST00000347519 SCRT2Q9NQ03 307 aa13.64□□□□□ -0.23
CHMP4A-201ENST00000347519 TENM3Q9P273 2699 aa13.64□□□□□ -0.23
CHMP4A-201ENST00000347519 XKRY2A2RUG3 117 aa13.63□□□□□ -0.23
CHMP4A-201ENST00000347519 HIGD1CA8MV81 97 aa13.63□□□□□ -0.23
CHMP4A-201ENST00000347519 SNAI2O43623 268 aa13.63□□□□□ -0.23
CHMP4A-201ENST00000347519 FOXA3P55318 350 aaPredicted RBP13.63□□□□□ -0.23
CHMP4A-201ENST00000347519 ZNF415Q09FC8 603 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms