RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 FAM74A7A6NL05 159 aa11.04□□□□□ -0.64
TSPAN4-201ENST00000346501 TEX46H3BTG2 121 aa11.04□□□□□ -0.64
TSPAN4-201ENST00000346501 M0R2N4 97 aa11.04□□□□□ -0.64
TSPAN4-201ENST00000346501 PFN1P07737 140 aaKnown RBP11.04□□□□□ -0.64
TSPAN4-201ENST00000346501 TVP23CQ96ET8 276 aa11.04□□□□□ -0.64
TSPAN4-201ENST00000346501 MDFICQ9P1T7 246 aa11.04□□□□□ -0.64
TSPAN4-201ENST00000346501 ARL2-SNX15V9GYD0 113 aa11.04□□□□□ -0.64
TSPAN4-201ENST00000346501 IGLV2-18A0A075B6J9 118 aa11.03□□□□□ -0.64
TSPAN4-201ENST00000346501 M0R2P5 195 aa11.03□□□□□ -0.64
TSPAN4-201ENST00000346501 PAX4O43316 350 aa11.03□□□□□ -0.64
TSPAN4-201ENST00000346501 IGHV3-53P01767 116 aa11.03□□□□□ -0.64
TSPAN4-201ENST00000346501 H2AFB1P0C5Y9 115 aa11.03□□□□□ -0.64
TSPAN4-201ENST00000346501 HOXA5P20719 270 aa11.03□□□□□ -0.64
TSPAN4-201ENST00000346501 FHITP49789 147 aa11.03□□□□□ -0.64
TSPAN4-201ENST00000346501 LGALSLQ3ZCW2 172 aaPredicted RBP11.03□□□□□ -0.64
TSPAN4-201ENST00000346501 LINC00336Q6ZUF6 198 aa11.03□□□□□ -0.64
TSPAN4-201ENST00000346501 TCTE3Q8IZS6 198 aa11.03□□□□□ -0.64
TSPAN4-201ENST00000346501 PRO0255Q9UI72 69 aa11.03□□□□□ -0.64
TSPAN4-201ENST00000346501 GNRH2O43555 120 aa11.02□□□□□ -0.65
TSPAN4-201ENST00000346501 RAB5CP51148 216 aa11.02□□□□□ -0.65
TSPAN4-201ENST00000346501 RASL10AQ92737 203 aa11.02□□□□□ -0.65
TSPAN4-201ENST00000346501 FMC1Q96HJ9 113 aa11.02□□□□□ -0.65
TSPAN4-201ENST00000346501 C8orf49Q96NF6 230 aa11.02□□□□□ -0.65
TSPAN4-201ENST00000346501 ZFP30Q9Y2G7 519 aa11.02□□□□□ -0.65
TSPAN4-201ENST00000346501 ICOSQ9Y6W8 199 aa11.02□□□□□ -0.65
TSPAN4-201ENST00000346501 TRAV34A0A0B4J273 112 aa11.01□□□□□ -0.65
TSPAN4-201ENST00000346501 IGHV3-16A0A0C4DH30 117 aa11.01□□□□□ -0.65
TSPAN4-201ENST00000346501 FABP5P3A8MUU1 101 aa11.01□□□□□ -0.65
TSPAN4-201ENST00000346501 IGLV2-11P01706 119 aa11.01□□□□□ -0.65
TSPAN4-201ENST00000346501 TYMSP04818 313 aa11.01□□□□□ -0.65
TSPAN4-201ENST00000346501 S100A4P26447 101 aaKnown RBP11.01□□□□□ -0.65
TSPAN4-201ENST00000346501 PCNPQ8WW12 178 aaKnown RBP11.01□□□□□ -0.65
TSPAN4-201ENST00000346501 MBD3L1Q8WWY6 194 aa11.01□□□□□ -0.65
TSPAN4-201ENST00000346501 HHLA3Q9XRX5 114 aa11.01□□□□□ -0.65
TSPAN4-201ENST00000346501 PAGE4O60829 102 aa11□□□□□ -0.65
TSPAN4-201ENST00000346501 AKR1C3P42330 323 aa11□□□□□ -0.65
TSPAN4-201ENST00000346501 Q6ZNX1 250 aa11□□□□□ -0.65
TSPAN4-201ENST00000346501 AKAP14Q86UN6 197 aa11□□□□□ -0.65
TSPAN4-201ENST00000346501 OR4C5Q8NGB2 326 aa11□□□□□ -0.65
TSPAN4-201ENST00000346501 EPPK1P58107 5090 aaKnown RBP10.99□□□□□ -0.65
TSPAN4-201ENST00000346501 TRAV4A0A0B4J268 109 aa10.99□□□□□ -0.65
TSPAN4-201ENST00000346501 A0A1B0GV50 99 aa10.99□□□□□ -0.65
TSPAN4-201ENST00000346501 C1QBP02746 253 aa10.99□□□□□ -0.65
TSPAN4-201ENST00000346501 S100A9P06702 114 aaKnown RBP10.99□□□□□ -0.65
TSPAN4-201ENST00000346501 MRPL23Q16540 153 aaKnown RBP10.99□□□□□ -0.65
TSPAN4-201ENST00000346501 Q86TA4 180 aa10.99□□□□□ -0.65
TSPAN4-201ENST00000346501 LINC00479Q96M42 142 aa10.99□□□□□ -0.65
TSPAN4-201ENST00000346501 CIDEAO60543 219 aa10.98□□□□□ -0.65
TSPAN4-201ENST00000346501 ORM1P02763 201 aa10.98□□□□□ -0.65
TSPAN4-201ENST00000346501 ZNF80P51504 273 aaPredicted RBP10.98□□□□□ -0.65
TSPAN4-201ENST00000346501 ZNF876PQ49A33 203 aa10.98□□□□□ -0.65
TSPAN4-201ENST00000346501 LINC00588Q9Y4M8 146 aa10.98□□□□□ -0.65
TSPAN4-201ENST00000346501 MUC4Q99102 2169 aa10.98□□□□□ -0.65
TSPAN4-201ENST00000346501 HYDINQ4G0P3 5121 aa10.97□□□□□ -0.65
TSPAN4-201ENST00000346501 hCG_2014768A0A024R1R8 64 aa10.97□□□□□ -0.65
TSPAN4-201ENST00000346501 C9JCJ5 164 aa10.97□□□□□ -0.65
TSPAN4-201ENST00000346501 ASIPP42127 132 aa10.97□□□□□ -0.65
TSPAN4-201ENST00000346501 CRYBA4P53673 196 aa10.97□□□□□ -0.65
TSPAN4-201ENST00000346501 TTC32Q5I0X7 151 aa10.97□□□□□ -0.65
TSPAN4-201ENST00000346501 C1orf134Q5TEV5 83 aa10.97□□□□□ -0.65
TSPAN4-201ENST00000346501 SLC51BQ86UW2 128 aa10.97□□□□□ -0.65
TSPAN4-201ENST00000346501 ZNRF2Q8NHG8 242 aa10.97□□□□□ -0.65
TSPAN4-201ENST00000346501 VSIG2Q96IQ7 327 aa10.97□□□□□ -0.65
TSPAN4-201ENST00000346501 A0A096LPF7 62 aa10.96□□□□□ -0.65
TSPAN4-201ENST00000346501 B4DEV8 164 aa10.96□□□□□ -0.65
TSPAN4-201ENST00000346501 SFTA3P0C7M3 94 aa10.96□□□□□ -0.65
TSPAN4-201ENST00000346501 FHL2Q14192 279 aa10.96□□□□□ -0.65
TSPAN4-201ENST00000346501 FAM162BQ5T6X4 162 aa10.96□□□□□ -0.65
TSPAN4-201ENST00000346501 ZNF479Q96JC4 524 aa10.96□□□□□ -0.65
TSPAN4-201ENST00000346501 Q9H8V8 135 aa10.96□□□□□ -0.65
TSPAN4-201ENST00000346501 MANBALQ9NQG1 85 aa10.96□□□□□ -0.65
TSPAN4-201ENST00000346501 TRBV6-1A0A0K0K1D8 114 aa10.95□□□□□ -0.66
TSPAN4-201ENST00000346501 NBDYA0A0U1RRE5 68 aa10.95□□□□□ -0.66
TSPAN4-201ENST00000346501 IFNA1P01562 189 aa10.95□□□□□ -0.66
TSPAN4-201ENST00000346501 SRIP30626 198 aa10.95□□□□□ -0.66
TSPAN4-201ENST00000346501 ESRGQ1W209 222 aa10.95□□□□□ -0.66
TSPAN4-201ENST00000346501 Q6ZR54 194 aa10.95□□□□□ -0.66
TSPAN4-201ENST00000346501 NEGR1Q7Z3B1 354 aa10.95□□□□□ -0.66
TSPAN4-201ENST00000346501 TXNDC17Q9BRA2 123 aa10.95□□□□□ -0.66
TSPAN4-201ENST00000346501 MRPS16Q9Y3D3 137 aaKnown RBP10.95□□□□□ -0.66
TSPAN4-201ENST00000346501 SH2D6Q7Z4S9 175 aa10.94□□□□□ -0.66
TSPAN4-201ENST00000346501 SYT8Q8NBV8 401 aa10.94□□□□□ -0.66
TSPAN4-201ENST00000346501 UPK3BQ9BT76 320 aa10.94□□□□□ -0.66
TSPAN4-201ENST00000346501 GNG13Q9P2W3 67 aa10.94□□□□□ -0.66
TSPAN4-201ENST00000346501 C11orf21Q9P2W6 132 aa10.94□□□□□ -0.66
TSPAN4-201ENST00000346501 NACAE9PAV3 2078 aa10.93□□□□□ -0.66
TSPAN4-201ENST00000346501 PRSS29PA6NIE9 313 aa10.93□□□□□ -0.66
TSPAN4-201ENST00000346501 LTAP01374 205 aa10.93□□□□□ -0.66
TSPAN4-201ENST00000346501 SULT1A2P50226 295 aa10.93□□□□□ -0.66
TSPAN4-201ENST00000346501 PTH2Q96A98 100 aa10.93□□□□□ -0.66
TSPAN4-201ENST00000346501 C9orf85Q96MD7 179 aa10.93□□□□□ -0.66
TSPAN4-201ENST00000346501 PRADC1Q9BSG0 188 aa10.93□□□□□ -0.66
TSPAN4-201ENST00000346501 BIRC6Q9NR09 4857 aa10.92□□□□□ -0.66
TSPAN4-201ENST00000346501 TRAV1-1A0A0B4J248 108 aa10.92□□□□□ -0.66
TSPAN4-201ENST00000346501 M0R036 132 aa10.92□□□□□ -0.66
TSPAN4-201ENST00000346501 SH2D1AO60880 128 aa10.92□□□□□ -0.66
TSPAN4-201ENST00000346501 GYPEP15421 78 aa10.92□□□□□ -0.66
TSPAN4-201ENST00000346501 COX8CQ7Z4L0 72 aa10.92□□□□□ -0.66
TSPAN4-201ENST00000346501 BAGE2Q86Y30 109 aa10.92□□□□□ -0.66
TSPAN4-201ENST00000346501 ZC2HC1AQ96GY0 325 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms