RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 DKK1O94907 266 aa15.52■□□□□ 0.08
HDAC4-201ENST00000345617 MCRIP2Q9BUT9 160 aaKnown RBP15.52■□□□□ 0.08
HDAC4-201ENST00000345617 HIVEP2P31629 2446 aa15.52■□□□□ 0.07
HDAC4-201ENST00000345617 SPACA3Q8IXA5 215 aa15.52■□□□□ 0.07
HDAC4-201ENST00000345617 H3BUX3 64 aa15.51■□□□□ 0.07
HDAC4-201ENST00000345617 TAX1BP3O14907 124 aa15.51■□□□□ 0.07
HDAC4-201ENST00000345617 FOXL2NBQ6ZUU3 175 aa15.51■□□□□ 0.07
HDAC4-201ENST00000345617 ZC2HC1AQ96GY0 325 aa15.51■□□□□ 0.07
HDAC4-201ENST00000345617 ZFP36L1Q07352 338 aaKnown RBP15.51■□□□□ 0.07
HDAC4-201ENST00000345617 A0A1B0GX51 115 aa15.51■□□□□ 0.07
HDAC4-201ENST00000345617 Q6ZRM9 215 aa15.51■□□□□ 0.07
HDAC4-201ENST00000345617 CCL25O15444 150 aa15.5■□□□□ 0.07
HDAC4-201ENST00000345617 HIVEP3Q5T1R4 2406 aa15.5■□□□□ 0.07
HDAC4-201ENST00000345617 MUC6Q6W4X9 2439 aa15.5■□□□□ 0.07
HDAC4-201ENST00000345617 NSUN5P1Q3KNT7 163 aa15.5■□□□□ 0.07
HDAC4-201ENST00000345617 Q8TCH9 128 aa15.5■□□□□ 0.07
HDAC4-201ENST00000345617 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-201ENST00000345617 ICOSQ9Y6W8 199 aa15.5■□□□□ 0.07
HDAC4-201ENST00000345617 RPL35AP18077 110 aaKnown RBP15.5■□□□□ 0.07
HDAC4-201ENST00000345617 GPR179Q6PRD1 2367 aa15.5■□□□□ 0.07
HDAC4-201ENST00000345617 SAA4P35542 130 aa15.49■□□□□ 0.07
HDAC4-201ENST00000345617 C5orf47Q569G3 176 aa15.49■□□□□ 0.07
HDAC4-201ENST00000345617 K7EM74 188 aa15.49■□□□□ 0.07
HDAC4-201ENST00000345617 IGHV3-53P01767 116 aa15.49■□□□□ 0.07
HDAC4-201ENST00000345617 SEC61GP60059 68 aa15.49■□□□□ 0.07
HDAC4-201ENST00000345617 KLF2Q9Y5W3 355 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-201ENST00000345617 H3BT86 120 aa15.49■□□□□ 0.07
HDAC4-201ENST00000345617 PSMB8P28062 276 aa15.49■□□□□ 0.07
HDAC4-201ENST00000345617 LINC01356Q8N9X3 169 aa15.49■□□□□ 0.07
HDAC4-201ENST00000345617 TEX48A0A1B0GUV7 120 aa15.48■□□□□ 0.07
HDAC4-201ENST00000345617 DEFB130BP0DP73 79 aa15.48■□□□□ 0.07
HDAC4-201ENST00000345617 DEFB130AP0DP74 79 aa15.48■□□□□ 0.07
HDAC4-201ENST00000345617 DAD1P61803 113 aa15.48■□□□□ 0.07
HDAC4-201ENST00000345617 UBE2E1P51965 193 aa15.48■□□□□ 0.07
HDAC4-201ENST00000345617 C11orf44Q8N8P7 122 aa15.48■□□□□ 0.07
HDAC4-201ENST00000345617 FXYD5Q96DB9 178 aa15.48■□□□□ 0.07
HDAC4-201ENST00000345617 ADAMTS20P59510 1910 aa15.48■□□□□ 0.07
HDAC4-201ENST00000345617 EFNA2O43921 213 aa15.47■□□□□ 0.07
HDAC4-201ENST00000345617 VWC2Q2TAL6 325 aa15.47■□□□□ 0.07
HDAC4-201ENST00000345617 LINC01620Q4KN68 170 aa15.47■□□□□ 0.07
HDAC4-201ENST00000345617 PRSS29PA6NIE9 313 aa15.47■□□□□ 0.07
HDAC4-201ENST00000345617 NTN5Q8WTR8 489 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-201ENST00000345617 ZNF747Q9BV97 191 aa15.47■□□□□ 0.07
HDAC4-201ENST00000345617 CR1LQ2VPA4 569 aa15.47■□□□□ 0.07
HDAC4-201ENST00000345617 CPAMD8Q8IZJ3 1885 aa15.47■□□□□ 0.07
HDAC4-201ENST00000345617 H3BUA1 57 aa15.47■□□□□ 0.07
HDAC4-201ENST00000345617 V9GYY9 64 aa15.47■□□□□ 0.07
HDAC4-201ENST00000345617 NDUFS5O43920 106 aa15.47■□□□□ 0.07
HDAC4-201ENST00000345617 LINC00311Q8N616 119 aa15.47■□□□□ 0.07
HDAC4-201ENST00000345617 TMEM256-PLSCR3K7ERE1 68 aa15.46■□□□□ 0.07
HDAC4-201ENST00000345617 ZFYVE26Q68DK2 2539 aa15.46■□□□□ 0.07
HDAC4-201ENST00000345617 AMTNQ6UX39 209 aa15.46■□□□□ 0.07
HDAC4-201ENST00000345617 ATP5EP2Q5VTU8 51 aa15.46■□□□□ 0.07
HDAC4-201ENST00000345617 ZFP2Q6ZN57 461 aa15.46■□□□□ 0.07
HDAC4-201ENST00000345617 OPRPNQ99935 248 aaPredicted RBP15.46■□□□□ 0.07
HDAC4-201ENST00000345617 VSIG2Q96IQ7 327 aa15.46■□□□□ 0.07
HDAC4-201ENST00000345617 TINCRA0A1B0GVN0 87 aa15.45■□□□□ 0.06
HDAC4-201ENST00000345617 DAZ2Q13117 558 aaKnown RBP15.45■□□□□ 0.06
HDAC4-201ENST00000345617 DAZ4Q86SG3 579 aaKnown RBP15.45■□□□□ 0.06
HDAC4-201ENST00000345617 WFDC9Q8NEX5 89 aa15.45■□□□□ 0.06
HDAC4-201ENST00000345617 DAZ3Q9NR90 486 aaKnown RBP15.45■□□□□ 0.06
HDAC4-201ENST00000345617 A0A0G2JRQ6 117 aa15.45■□□□□ 0.06
HDAC4-201ENST00000345617 UBE2BP63146 152 aa15.45■□□□□ 0.06
HDAC4-201ENST00000345617 C8orf31Q8N9H6 132 aa15.45■□□□□ 0.06
HDAC4-201ENST00000345617 MRPL55Q7Z7F7 128 aaKnown RBP15.45■□□□□ 0.06
HDAC4-201ENST00000345617 MBD3L4A6NDZ8 208 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-201ENST00000345617 MBD3L3A6NE82 208 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-201ENST00000345617 MBD3L5A6NJ08 208 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-201ENST00000345617 MBD3L2Q8NHZ7 208 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-201ENST00000345617 OVOL3O00110 214 aa15.44■□□□□ 0.06
HDAC4-201ENST00000345617 NDUFC1O43677 76 aa15.44■□□□□ 0.06
HDAC4-201ENST00000345617 PRB3Q04118 309 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-201ENST00000345617 TRAV26-2A0A0B4J265 109 aa15.44■□□□□ 0.06
HDAC4-201ENST00000345617 C5orf63A6NC05 138 aa15.44■□□□□ 0.06
HDAC4-201ENST00000345617 TFF1P04155 84 aa15.44■□□□□ 0.06
HDAC4-201ENST00000345617 LTBRP36941 435 aa15.44■□□□□ 0.06
HDAC4-201ENST00000345617 LRRK2Q5S007 2527 aa15.43■□□□□ 0.06
HDAC4-201ENST00000345617 SPINK13Q1W4C9 94 aa15.43■□□□□ 0.06
HDAC4-201ENST00000345617 LINC01619G3V211 115 aa15.43■□□□□ 0.06
HDAC4-201ENST00000345617 CXCL5P42830 114 aa15.43■□□□□ 0.06
HDAC4-201ENST00000345617 F5H768 121 aa15.43■□□□□ 0.06
HDAC4-201ENST00000345617 DKK2Q9UBU2 259 aa15.42■□□□□ 0.06
HDAC4-201ENST00000345617 MUSTN1Q8IVN3 82 aa15.42■□□□□ 0.06
HDAC4-201ENST00000345617 CRYGCP07315 174 aa15.42■□□□□ 0.06
HDAC4-201ENST00000345617 VOPP1Q96AW1 172 aa15.42■□□□□ 0.06
HDAC4-201ENST00000345617 G3V4G9 280 aa15.41■□□□□ 0.06
HDAC4-201ENST00000345617 Q9H8V8 135 aa15.41■□□□□ 0.06
HDAC4-201ENST00000345617 IGLL5B9A064 214 aa15.41■□□□□ 0.06
HDAC4-201ENST00000345617 IGLC1P0CG04 106 aa15.41■□□□□ 0.06
HDAC4-201ENST00000345617 PROP1O75360 226 aa15.41■□□□□ 0.06
HDAC4-201ENST00000345617 COL4A5P29400 1685 aa15.41■□□□□ 0.06
HDAC4-201ENST00000345617 ZNF726P1Q15940 193 aa15.41■□□□□ 0.06
HDAC4-201ENST00000345617 C22orf46C9J442 243 aa15.41■□□□□ 0.06
HDAC4-201ENST00000345617 PRR31Q5SQ13 230 aa15.4■□□□□ 0.06
HDAC4-201ENST00000345617 FOXI1Q12951 378 aa15.4■□□□□ 0.06
HDAC4-201ENST00000345617 UBE2E2Q96LR5 201 aa15.4■□□□□ 0.06
HDAC4-201ENST00000345617 HIGD2BQ4VC39 106 aa15.4■□□□□ 0.06
HDAC4-201ENST00000345617 CSRP1P21291 193 aaKnown RBP15.4■□□□□ 0.06
HDAC4-201ENST00000345617 CLPSP04118 112 aa15.39■□□□□ 0.05
HDAC4-201ENST00000345617 IGKV1-6A0A0C4DH72 117 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms