RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 NDUFS8O00217 210 aa12.09□□□□□ -0.47
PTPRU-201ENST00000345512 FAM223BA6NKX1 122 aa12.09□□□□□ -0.47
PTPRU-201ENST00000345512 FAM223AQ8IWN6 122 aa12.09□□□□□ -0.47
PTPRU-201ENST00000345512 TP53TG1Q9Y2A0 90 aa12.09□□□□□ -0.47
PTPRU-201ENST00000345512 TRIOO75962 3097 aa12.09□□□□□ -0.47
PTPRU-201ENST00000345512 CRIP1P50238 77 aa12.09□□□□□ -0.47
PTPRU-201ENST00000345512 TTC32Q5I0X7 151 aa12.09□□□□□ -0.47
PTPRU-201ENST00000345512 LINC01549A6NIU2 74 aa12.08□□□□□ -0.48
PTPRU-201ENST00000345512 ZNF80P51504 273 aaPredicted RBP12.08□□□□□ -0.48
PTPRU-201ENST00000345512 BUB3O43684 328 aa12.08□□□□□ -0.48
PTPRU-201ENST00000345512 IGHV4-39P01824 125 aa12.08□□□□□ -0.48
PTPRU-201ENST00000345512 C12orf74Q32Q52 190 aa12.08□□□□□ -0.48
PTPRU-201ENST00000345512 ARHGAP32A7KAX9 2087 aa12.08□□□□□ -0.48
PTPRU-201ENST00000345512 IGF2RP11717 2491 aa12.08□□□□□ -0.48
PTPRU-201ENST00000345512 HLA-DRB4P13762 266 aa12.08□□□□□ -0.48
PTPRU-201ENST00000345512 HLA-DRB4X5D2U9 266 aa12.08□□□□□ -0.48
PTPRU-201ENST00000345512 ATRXP46100 2492 aa12.08□□□□□ -0.48
PTPRU-201ENST00000345512 TET2Q6N021 2002 aaPredicted RBP12.07□□□□□ -0.48
PTPRU-201ENST00000345512 TEX48A0A1B0GUV7 120 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 F8W1H4 67 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 IGLV2-11P01706 119 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 CIRBPQ14011 172 aaKnown RBP12.07□□□□□ -0.48
PTPRU-201ENST00000345512 URB1-AS1Q96HZ7 61 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 DUX3Q96PT4 197 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 RBX1P62877 108 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 IGF2-ASQ6U949 168 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 SNCGO76070 127 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 ZNF876PQ49A33 203 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 CRYGBP07316 175 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 RAX2Q96IS3 184 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 ERG28Q9UKR5 140 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 DSCAML1Q8TD84 2053 aa12.07□□□□□ -0.48
PTPRU-201ENST00000345512 USMG5Q96IX5 58 aa12.06□□□□□ -0.48
PTPRU-201ENST00000345512 CD28P10747 220 aa12.06□□□□□ -0.48
PTPRU-201ENST00000345512 CACNA1AO00555 2505 aa12.06□□□□□ -0.48
PTPRU-201ENST00000345512 HOXB4P17483 251 aaPredicted RBP12.06□□□□□ -0.48
PTPRU-201ENST00000345512 F6UB75 175 aa12.05□□□□□ -0.48
PTPRU-201ENST00000345512 ODF1Q14990 250 aa12.05□□□□□ -0.48
PTPRU-201ENST00000345512 IGHV3-73A0A0B4J1V6 119 aa12.05□□□□□ -0.48
PTPRU-201ENST00000345512 MEIG1Q5JSS6 88 aa12.05□□□□□ -0.48
PTPRU-201ENST00000345512 DAZ1Q9NQZ3 744 aaKnown RBP12.05□□□□□ -0.48
PTPRU-201ENST00000345512 IGKV3D-20A0A0C4DH25 116 aa12.05□□□□□ -0.48
PTPRU-201ENST00000345512 RBAKDNA6NC62 111 aa12.05□□□□□ -0.48
PTPRU-201ENST00000345512 TAL2Q16559 108 aa12.05□□□□□ -0.48
PTPRU-201ENST00000345512 C1orf122Q6ZSJ8 110 aa12.05□□□□□ -0.48
PTPRU-201ENST00000345512 CUL9Q8IWT3 2517 aa12.05□□□□□ -0.48
PTPRU-201ENST00000345512 Q8N9W7 124 aa12.04□□□□□ -0.48
PTPRU-201ENST00000345512 ADAMTS20P59510 1910 aa12.04□□□□□ -0.48
PTPRU-201ENST00000345512 DNAH14Q0VDD8 3507 aa12.04□□□□□ -0.48
PTPRU-201ENST00000345512 PRSS29PA6NIE9 313 aa12.03□□□□□ -0.48
PTPRU-201ENST00000345512 SH2D6Q7Z4S9 175 aa12.03□□□□□ -0.48
PTPRU-201ENST00000345512 GAGE12HA6NDE8 117 aa12.03□□□□□ -0.48
PTPRU-201ENST00000345512 GNRH2O43555 120 aa12.03□□□□□ -0.48
PTPRU-201ENST00000345512 SDHAF1A6NFY7 115 aa12.03□□□□□ -0.48
PTPRU-201ENST00000345512 IGLL5B9A064 214 aa12.03□□□□□ -0.48
PTPRU-201ENST00000345512 DUSP14O95147 198 aaKnown RBP12.03□□□□□ -0.48
PTPRU-201ENST00000345512 RPL39LQ96EH5 51 aaKnown RBP12.03□□□□□ -0.48
PTPRU-201ENST00000345512 AZU1P20160 251 aa12.02□□□□□ -0.48
PTPRU-201ENST00000345512 CKS1BP61024 79 aa12.02□□□□□ -0.48
PTPRU-201ENST00000345512 PMVKQ15126 192 aa12.02□□□□□ -0.48
PTPRU-201ENST00000345512 C20orf78Q9BR46 151 aa12.02□□□□□ -0.48
PTPRU-201ENST00000345512 Q8NA96 180 aa12.02□□□□□ -0.49
PTPRU-201ENST00000345512 LINC01587Q99440 93 aa12.02□□□□□ -0.49
PTPRU-201ENST00000345512 C19orf54Q5BKX5 351 aa12.02□□□□□ -0.49
PTPRU-201ENST00000345512 ITLN2Q8WWU7 325 aaPredicted RBP12.02□□□□□ -0.49
PTPRU-201ENST00000345512 TMEM238C9JI98 176 aa12.01□□□□□ -0.49
PTPRU-201ENST00000345512 NDUFA4O00483 81 aa12.01□□□□□ -0.49
PTPRU-201ENST00000345512 NPC2P61916 151 aa12.01□□□□□ -0.49
PTPRU-201ENST00000345512 TEX29Q8N6K0 151 aa12.01□□□□□ -0.49
PTPRU-201ENST00000345512 HIGD1BQ9P298 99 aa12.01□□□□□ -0.49
PTPRU-201ENST00000345512 IGKV3OR2-268A0A0C4DH90 116 aa12.01□□□□□ -0.49
PTPRU-201ENST00000345512 A0A0U1RRA0 63 aa12.01□□□□□ -0.49
PTPRU-201ENST00000345512 TMEM262E9PQX1 116 aa12.01□□□□□ -0.49
PTPRU-201ENST00000345512 WFDC2Q14508 124 aa12.01□□□□□ -0.49
PTPRU-201ENST00000345512 RRN3P1Q2M238 152 aa12.01□□□□□ -0.49
PTPRU-201ENST00000345512 CENPVL3A0A0U1RRI6 287 aa12□□□□□ -0.49
PTPRU-201ENST00000345512 SPINK8P0C7L1 97 aa12□□□□□ -0.49
PTPRU-201ENST00000345512 C2orf91Q6ZV80 131 aa12□□□□□ -0.49
PTPRU-201ENST00000345512 Q71RC1 249 aaPredicted RBP12□□□□□ -0.49
PTPRU-201ENST00000345512 CFAP54Q96N23 3096 aa12□□□□□ -0.49
PTPRU-201ENST00000345512 TRGV11A0A075B6L2 103 aa12□□□□□ -0.49
PTPRU-201ENST00000345512 SPXQ9BT56 116 aa12□□□□□ -0.49
PTPRU-201ENST00000345512 IGLC6P0CF74 106 aa12□□□□□ -0.49
PTPRU-201ENST00000345512 IGHV1-69DA0A0B4J2H0 117 aa12□□□□□ -0.49
PTPRU-201ENST00000345512 IGHV1-69P01742 117 aa12□□□□□ -0.49
PTPRU-201ENST00000345512 MRPL53Q96EL3 112 aaKnown RBP12□□□□□ -0.49
PTPRU-201ENST00000345512 ZNF48Q96MX3 618 aaPredicted RBP12□□□□□ -0.49
PTPRU-201ENST00000345512 C9JAW5 83 aa11.99□□□□□ -0.49
PTPRU-201ENST00000345512 FOXI2Q6ZQN5 318 aa11.99□□□□□ -0.49
PTPRU-201ENST00000345512 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
PTPRU-201ENST00000345512 C2CD3Q4AC94 2353 aa11.99□□□□□ -0.49
PTPRU-201ENST00000345512 ZFP36P26651 326 aaKnown RBP11.99□□□□□ -0.49
PTPRU-201ENST00000345512 DEFB1P60022 68 aa11.99□□□□□ -0.49
PTPRU-201ENST00000345512 TRAV12-2A0A075B6T6 113 aa11.99□□□□□ -0.49
PTPRU-201ENST00000345512 UBE2L6O14933 153 aa11.99□□□□□ -0.49
PTPRU-201ENST00000345512 SPINK13Q1W4C9 94 aa11.99□□□□□ -0.49
PTPRU-201ENST00000345512 TNRC6BQ9UPQ9 1833 aaKnown RBP11.98□□□□□ -0.49
PTPRU-201ENST00000345512 ANAPC13Q9BS18 74 aa11.98□□□□□ -0.49
PTPRU-201ENST00000345512 KLK9Q9UKQ9 250 aa11.98□□□□□ -0.49
PTPRU-201ENST00000345512 LENEPQ9Y5L5 61 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms