RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 LINC00311Q8N616 119 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 DSCR8Q96T75 97 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 AGPAT4-IT1Q9H0P7 198 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 KMT2EQ8IZD2 1858 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 IGHV1OR15-1A0A075B7D0 117 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 GATA4P43694 442 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 LOXL1Q08397 574 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-202ENST00000345356 SS18Q15532 418 aa9.51□□□□□ -0.89
COL12A1-202ENST00000345356 Q6ZSR3 168 aa9.51□□□□□ -0.89
COL12A1-202ENST00000345356 A0A1B0GXF2 115 aa9.51□□□□□ -0.89
COL12A1-202ENST00000345356 NXPH4O95158 308 aa9.51□□□□□ -0.89
COL12A1-202ENST00000345356 UBE2E2Q96LR5 201 aa9.51□□□□□ -0.89
COL12A1-202ENST00000345356 CADP27708 2225 aa9.51□□□□□ -0.89
COL12A1-202ENST00000345356 TRAV12-2A0A075B6T6 113 aa9.51□□□□□ -0.89
COL12A1-202ENST00000345356 COL8A2P25067 703 aa9.51□□□□□ -0.89
COL12A1-202ENST00000345356 C5orf47Q569G3 176 aa9.51□□□□□ -0.89
COL12A1-202ENST00000345356 Q9H8V8 135 aa9.51□□□□□ -0.89
COL12A1-202ENST00000345356 IGLV2-14P01704 120 aa9.5□□□□□ -0.89
COL12A1-202ENST00000345356 HERVK_113P63121 156 aa9.5□□□□□ -0.89
COL12A1-202ENST00000345356 RHOHQ15669 191 aa9.5□□□□□ -0.89
COL12A1-202ENST00000345356 GNRH2O43555 120 aa9.5□□□□□ -0.89
COL12A1-202ENST00000345356 Q8TCH9 128 aa9.5□□□□□ -0.89
COL12A1-202ENST00000345356 WDR90Q96KV7 1748 aa9.5□□□□□ -0.89
COL12A1-202ENST00000345356 H3BT86 120 aa9.5□□□□□ -0.89
COL12A1-202ENST00000345356 IGHG3P01860 377 aa9.5□□□□□ -0.89
COL12A1-202ENST00000345356 NDUFA11Q86Y39 141 aa9.5□□□□□ -0.89
COL12A1-202ENST00000345356 DOCK7Q96N67 2140 aa9.5□□□□□ -0.89
COL12A1-202ENST00000345356 IGKV1OR2-108A0A075B7D4 117 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 RBAKDNA6NC62 111 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 G3V318 75 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 CLEC2BQ92478 149 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 LOXP28300 417 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-202ENST00000345356 RNF114Q9Y508 228 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 PKDREJQ9NTG1 2253 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 PLXNA2O75051 1894 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 BAALCQ8WXS3 180 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 ORMDL1Q9P0S3 153 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 WDR81Q562E7 1941 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 BRD3OSQ6XYD6 125 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 H3BUX3 64 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 PRB1P04280 392 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 ARFGEF3Q5TH69 2177 aa9.49□□□□□ -0.89
COL12A1-202ENST00000345356 A0A0J9YXV3 536 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 MBD3L4A6NDZ8 208 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-202ENST00000345356 MBD3L3A6NE82 208 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-202ENST00000345356 MBD3L5A6NJ08 208 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-202ENST00000345356 IGLV2-8P01709 118 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 Q8N1Y9 231 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 MBD3L2Q8NHZ7 208 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-202ENST00000345356 C19orf71A6NCJ1 209 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 CRYGBP07316 175 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 HOXD3P31249 432 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-202ENST00000345356 SUMO4Q6EEV6 95 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 DTX1Q86Y01 620 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 LY6HO94772 140 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 DEFB131AP59861 70 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 LGALS9O00182 355 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 ZFP2Q6ZN57 461 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 C11orf53Q8IXP5 236 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 PIFOQ8TCI5 191 aa9.48□□□□□ -0.89
COL12A1-202ENST00000345356 SAA4P35542 130 aa9.47□□□□□ -0.89
COL12A1-202ENST00000345356 ZDBF2Q9HCK1 2354 aa9.47□□□□□ -0.89
COL12A1-202ENST00000345356 NCOR1O75376 2440 aa9.47□□□□□ -0.89
COL12A1-202ENST00000345356 NLRC5Q86WI3 1866 aa9.47□□□□□ -0.89
COL12A1-202ENST00000345356 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
COL12A1-202ENST00000345356 F8WEM9 126 aa9.47□□□□□ -0.89
COL12A1-202ENST00000345356 ZNF295-AS1Q8N0V1 137 aa9.47□□□□□ -0.89
COL12A1-202ENST00000345356 TOMM6Q96B49 74 aa9.47□□□□□ -0.89
COL12A1-202ENST00000345356 ZNF503Q96F45 646 aa9.47□□□□□ -0.89
COL12A1-202ENST00000345356 TM2D2Q9BX73 214 aa9.47□□□□□ -0.89
COL12A1-202ENST00000345356 CD59P13987 128 aa9.46□□□□□ -0.89
COL12A1-202ENST00000345356 PSMB8P28062 276 aa9.46□□□□□ -0.89
COL12A1-202ENST00000345356 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.89
COL12A1-202ENST00000345356 RLFQ13129 1914 aa9.46□□□□□ -0.89
COL12A1-202ENST00000345356 IGHG2P01859 326 aa9.46□□□□□ -0.89
COL12A1-202ENST00000345356 CACNA1GO43497 2377 aa9.46□□□□□ -0.9
COL12A1-202ENST00000345356 C11orf86A6NJI1 115 aa9.46□□□□□ -0.9
COL12A1-202ENST00000345356 F6UB75 175 aa9.46□□□□□ -0.9
COL12A1-202ENST00000345356 ATP5G1P05496 136 aa9.46□□□□□ -0.9
COL12A1-202ENST00000345356 SRSF2Q01130 221 aaKnown RBP9.46□□□□□ -0.9
COL12A1-202ENST00000345356 BRK1Q8WUW1 75 aa9.46□□□□□ -0.9
COL12A1-202ENST00000345356 KRTAP27-1Q3LI81 207 aa9.46□□□□□ -0.9
COL12A1-202ENST00000345356 LINC00643Q86TS7 51 aa9.46□□□□□ -0.9
COL12A1-202ENST00000345356 ZNF407Q9C0G0 2248 aa9.45□□□□□ -0.9
COL12A1-202ENST00000345356 EML6Q6ZMW3 1958 aa9.45□□□□□ -0.9
COL12A1-202ENST00000345356 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-202ENST00000345356 IGKV2-29A2NJV5 120 aaPredicted RBP9.45□□□□□ -0.9
COL12A1-202ENST00000345356 UQCRQO14949 82 aa9.45□□□□□ -0.9
COL12A1-202ENST00000345356 CRYGCP07315 174 aa9.45□□□□□ -0.9
COL12A1-202ENST00000345356 RPL39P62891 51 aaKnown RBP9.45□□□□□ -0.9
COL12A1-202ENST00000345356 C11orf44Q8N8P7 122 aa9.45□□□□□ -0.9
COL12A1-202ENST00000345356 TEX49A0A1B0GTD5 131 aa9.45□□□□□ -0.9
COL12A1-202ENST00000345356 DAND5Q8N907 189 aa9.45□□□□□ -0.9
COL12A1-202ENST00000345356 IGLV3-9A0A075B6K5 115 aa9.45□□□□□ -0.9
COL12A1-202ENST00000345356 IGKV1-17P01599 117 aa9.45□□□□□ -0.9
COL12A1-202ENST00000345356 SPATA25Q9BR10 227 aa9.45□□□□□ -0.9
COL12A1-202ENST00000345356 A0A0G2JNJ9 132 aa9.44□□□□□ -0.9
COL12A1-202ENST00000345356 NBL1P41271 181 aa9.44□□□□□ -0.9
COL12A1-202ENST00000345356 LINC00322Q6ZN03 302 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms