RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 RNASE6Q93091 150 aaKnown RBP11.44□□□□□ -0.58
CLCN1-201ENST00000343257 SPTBN1Q01082 2364 aaKnown RBP11.44□□□□□ -0.58
CLCN1-201ENST00000343257 LINC01546A6NGU7 62 aa11.43□□□□□ -0.58
CLCN1-201ENST00000343257 LY6HO94772 140 aa11.43□□□□□ -0.58
CLCN1-201ENST00000343257 ARL3P36405 182 aa11.43□□□□□ -0.58
CLCN1-201ENST00000343257 RAX2Q96IS3 184 aa11.43□□□□□ -0.58
CLCN1-201ENST00000343257 ERG28Q9UKR5 140 aa11.43□□□□□ -0.58
CLCN1-201ENST00000343257 THBDP07204 575 aa11.43□□□□□ -0.58
CLCN1-201ENST00000343257 ASCL5Q7RTU5 278 aa11.43□□□□□ -0.58
CLCN1-201ENST00000343257 ANKRD29Q8N6D5 301 aa11.43□□□□□ -0.58
CLCN1-201ENST00000343257 PPDPFLQ8WWR9 84 aa11.43□□□□□ -0.58
CLCN1-201ENST00000343257 IGF1P05019 195 aa11.42□□□□□ -0.58
CLCN1-201ENST00000343257 DEFB1P60022 68 aa11.42□□□□□ -0.58
CLCN1-201ENST00000343257 NUP37Q8NFH4 326 aa11.42□□□□□ -0.58
CLCN1-201ENST00000343257 CTSGP08311 255 aa11.42□□□□□ -0.58
CLCN1-201ENST00000343257 LINC01559Q495D7 138 aa11.42□□□□□ -0.58
CLCN1-201ENST00000343257 C1orf122Q6ZSJ8 110 aa11.42□□□□□ -0.58
CLCN1-201ENST00000343257 C14orf178Q8N769 122 aaPredicted RBP11.42□□□□□ -0.58
CLCN1-201ENST00000343257 CNFNQ9BYD5 112 aa11.42□□□□□ -0.58
CLCN1-201ENST00000343257 ACACAQ13085 2346 aa11.41□□□□□ -0.58
CLCN1-201ENST00000343257 Q6ZS46 218 aa11.41□□□□□ -0.58
CLCN1-201ENST00000343257 SMIM2Q9BVW6 85 aa11.41□□□□□ -0.58
CLCN1-201ENST00000343257 A8MWV9 139 aa11.41□□□□□ -0.58
CLCN1-201ENST00000343257 TEN1Q86WV5 123 aa11.41□□□□□ -0.58
CLCN1-201ENST00000343257 TEX29Q8N6K0 151 aa11.41□□□□□ -0.58
CLCN1-201ENST00000343257 IGLV11-55A0A075B6I3 123 aa11.4□□□□□ -0.58
CLCN1-201ENST00000343257 IGHV7-4-1A0A0J9YVY3 117 aa11.4□□□□□ -0.58
CLCN1-201ENST00000343257 A6NJY4 79 aa11.4□□□□□ -0.58
CLCN1-201ENST00000343257 ZFAND6Q6FIF0 208 aa11.4□□□□□ -0.58
CLCN1-201ENST00000343257 C2orf66Q6UXQ4 117 aa11.4□□□□□ -0.58
CLCN1-201ENST00000343257 RASL10AQ92737 203 aa11.4□□□□□ -0.58
CLCN1-201ENST00000343257 CRIP2P52943 208 aaPredicted RBP11.4□□□□□ -0.58
CLCN1-201ENST00000343257 TRPT1Q86TN4 253 aaKnown RBP11.4□□□□□ -0.58
CLCN1-201ENST00000343257 BAALCQ8WXS3 180 aa11.4□□□□□ -0.58
CLCN1-201ENST00000343257 NBASA2RRP1 2371 aa11.4□□□□□ -0.58
CLCN1-201ENST00000343257 TRAV8-2A0A0B4J237 113 aa11.4□□□□□ -0.59
CLCN1-201ENST00000343257 ZNF688P0C7X2 276 aa11.4□□□□□ -0.59
CLCN1-201ENST00000343257 PSMG3-AS1Q96PY0 264 aa11.4□□□□□ -0.59
CLCN1-201ENST00000343257 NEXN-AS1Q8NBZ9 246 aa11.39□□□□□ -0.59
CLCN1-201ENST00000343257 ZNF883P0CG24 379 aa11.39□□□□□ -0.59
CLCN1-201ENST00000343257 COX8CQ7Z4L0 72 aa11.39□□□□□ -0.59
CLCN1-201ENST00000343257 BEX4Q9NWD9 120 aaPredicted RBP11.39□□□□□ -0.59
CLCN1-201ENST00000343257 C9JAW5 83 aa11.38□□□□□ -0.59
CLCN1-201ENST00000343257 ECSCRQ19T08 205 aa11.38□□□□□ -0.59
CLCN1-201ENST00000343257 NDUFA11Q86Y39 141 aa11.38□□□□□ -0.59
CLCN1-201ENST00000343257 ATP6V0E2Q8NHE4 81 aa11.38□□□□□ -0.59
CLCN1-201ENST00000343257 S100A4P26447 101 aaKnown RBP11.38□□□□□ -0.59
CLCN1-201ENST00000343257 C5orf64Q2M2E5 130 aa11.38□□□□□ -0.59
CLCN1-201ENST00000343257 AJUBAQ96IF1 538 aa11.38□□□□□ -0.59
CLCN1-201ENST00000343257 E7EQL1 145 aa11.38□□□□□ -0.59
CLCN1-201ENST00000343257 DUSP14O95147 198 aaKnown RBP11.38□□□□□ -0.59
CLCN1-201ENST00000343257 CLEC3BP05452 202 aa11.38□□□□□ -0.59
CLCN1-201ENST00000343257 SUMO2P61956 95 aaKnown RBP11.38□□□□□ -0.59
CLCN1-201ENST00000343257 OR11H6Q8NGC7 330 aa11.38□□□□□ -0.59
CLCN1-201ENST00000343257 MSRB2Q9Y3D2 182 aa11.38□□□□□ -0.59
CLCN1-201ENST00000343257 IGHV3-64A0A075B6Q5 118 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 A0A0G2JNJ9 132 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 UBE2D1P51668 147 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 PRR9Q5T870 116 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 IGFL2Q6UWQ7 119 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 Q9UFV3 132 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 C11orf86A6NJI1 115 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 GAGE5Q13069 117 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 GAGE6Q13070 117 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 TMEM170BQ5T4T1 132 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 KAAG1Q9UBP8 84 aa11.37□□□□□ -0.59
CLCN1-201ENST00000343257 CRLF1O75462 422 aa11.36□□□□□ -0.59
CLCN1-201ENST00000343257 IGKV3-7A0A075B6H7 116 aa11.36□□□□□ -0.59
CLCN1-201ENST00000343257 CD7P09564 240 aa11.36□□□□□ -0.59
CLCN1-201ENST00000343257 CFC1BP0CG36 223 aa11.36□□□□□ -0.59
CLCN1-201ENST00000343257 CFC1P0CG37 223 aa11.36□□□□□ -0.59
CLCN1-201ENST00000343257 UBE2D3P61077 147 aa11.36□□□□□ -0.59
CLCN1-201ENST00000343257 UBE2D2P62837 147 aa11.36□□□□□ -0.59
CLCN1-201ENST00000343257 DPM3Q9P2X0 92 aa11.36□□□□□ -0.59
CLCN1-201ENST00000343257 TRAV12-1A0A0B4J245 112 aa11.36□□□□□ -0.59
CLCN1-201ENST00000343257 CLEC19AQ6UXS0 136 aa11.36□□□□□ -0.59
CLCN1-201ENST00000343257 TOMM6Q96B49 74 aa11.36□□□□□ -0.59
CLCN1-201ENST00000343257 TRAV4A0A0B4J268 109 aa11.35□□□□□ -0.59
CLCN1-201ENST00000343257 CCDC179H3BU77 68 aa11.35□□□□□ -0.59
CLCN1-201ENST00000343257 COLQQ9Y215 455 aaPredicted RBP11.35□□□□□ -0.59
CLCN1-201ENST00000343257 C15orf32Q32M92 178 aa11.35□□□□□ -0.59
CLCN1-201ENST00000343257 ORMDL2Q53FV1 153 aa11.35□□□□□ -0.59
CLCN1-201ENST00000343257 C3orf56Q8N813 242 aa11.35□□□□□ -0.59
CLCN1-201ENST00000343257 LY6LH3BQJ8 138 aa11.34□□□□□ -0.59
CLCN1-201ENST00000343257 IGHV4-39P01824 125 aa11.34□□□□□ -0.59
CLCN1-201ENST00000343257 TSPEAR-AS2P59090 65 aa11.34□□□□□ -0.59
CLCN1-201ENST00000343257 RPL39P62891 51 aaKnown RBP11.34□□□□□ -0.59
CLCN1-201ENST00000343257 AKAP6Q13023 2319 aa11.34□□□□□ -0.59
CLCN1-201ENST00000343257 A0A0J9YY99 117 aa11.34□□□□□ -0.59
CLCN1-201ENST00000343257 SLC25A20O43772 301 aa11.34□□□□□ -0.59
CLCN1-201ENST00000343257 Q1RN00 199 aa11.34□□□□□ -0.59
CLCN1-201ENST00000343257 DEFB124Q8NES8 71 aa11.34□□□□□ -0.59
CLCN1-201ENST00000343257 BUB3O43684 328 aa11.33□□□□□ -0.6
CLCN1-201ENST00000343257 NHLRC4P0CG21 123 aaPredicted RBP11.33□□□□□ -0.6
CLCN1-201ENST00000343257 GAGE2BQ13066 116 aa11.33□□□□□ -0.6
CLCN1-201ENST00000343257 GAGE2EQ4V326 116 aa11.33□□□□□ -0.6
CLCN1-201ENST00000343257 GAGE2DQ9UEU5 116 aa11.33□□□□□ -0.6
CLCN1-201ENST00000343257 SRSF2Q01130 221 aaKnown RBP11.33□□□□□ -0.6
CLCN1-201ENST00000343257 SMIM20Q8N5G0 67 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms