RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 NIT1Q86X76 327 aa14.93□□□□□ -0.02
RTN1-202ENST00000342503 AMN1Q8IY45 258 aa14.93□□□□□ -0.02
RTN1-202ENST00000342503 KLLNB2CW77 178 aa14.92□□□□□ -0.02
RTN1-202ENST00000342503 ZNF324O75467 553 aaPredicted RBP14.92□□□□□ -0.02
RTN1-202ENST00000342503 AMTP48728 403 aa14.92□□□□□ -0.02
RTN1-202ENST00000342503 EBLN2Q6P2I7 272 aa14.92□□□□□ -0.02
RTN1-202ENST00000342503 RNASEKQ6P5S7 137 aaKnown RBP14.92□□□□□ -0.02
RTN1-202ENST00000342503 Q6ZWC4 215 aa14.92□□□□□ -0.02
RTN1-202ENST00000342503 DYNLRB2Q8TF09 96 aa14.92□□□□□ -0.02
RTN1-202ENST00000342503 URB1-AS1Q96HZ7 61 aa14.92□□□□□ -0.02
RTN1-202ENST00000342503 CCL24O00175 119 aa14.92□□□□□ -0.02
RTN1-202ENST00000342503 ANXA2RQ3ZCQ2 193 aa14.92□□□□□ -0.02
RTN1-202ENST00000342503 DNLZQ5SXM8 178 aa14.92□□□□□ -0.02
RTN1-202ENST00000342503 LEPP41159 167 aa14.91□□□□□ -0.02
RTN1-202ENST00000342503 TMEM61Q8N0U2 210 aa14.91□□□□□ -0.02
RTN1-202ENST00000342503 FAM19A2Q8N3H0 131 aa14.91□□□□□ -0.02
RTN1-202ENST00000342503 OR10AG1Q8NH19 301 aa14.91□□□□□ -0.02
RTN1-202ENST00000342503 ODF3Q96PU9 254 aa14.91□□□□□ -0.02
RTN1-202ENST00000342503 TMEM191AQ9H0A3 160 aa14.91□□□□□ -0.02
RTN1-202ENST00000342503 RNF114Q9Y508 228 aa14.91□□□□□ -0.02
RTN1-202ENST00000342503 NF1P21359 2839 aa14.9□□□□□ -0.02
RTN1-202ENST00000342503 INAFM1C9JVW0 142 aa14.9□□□□□ -0.02
RTN1-202ENST00000342503 H3BVH4 76 aa14.9□□□□□ -0.02
RTN1-202ENST00000342503 SNAI2O43623 268 aa14.9□□□□□ -0.02
RTN1-202ENST00000342503 IGKV3-20P01619 116 aa14.9□□□□□ -0.02
RTN1-202ENST00000342503 OR5AL1P0C617 328 aa14.9□□□□□ -0.02
RTN1-202ENST00000342503 DEFB114Q30KQ6 69 aa14.9□□□□□ -0.02
RTN1-202ENST00000342503 MRPL51Q4U2R6 128 aaKnown RBP14.9□□□□□ -0.02
RTN1-202ENST00000342503 U3KQK5 164 aa14.9□□□□□ -0.02
RTN1-202ENST00000342503 OTOGQ6ZRI0 2925 aa14.9□□□□□ -0.02
RTN1-202ENST00000342503 TRAV2A0A0B4J234 112 aa14.89□□□□□ -0.03
RTN1-202ENST00000342503 DUSP14O95147 198 aaKnown RBP14.89□□□□□ -0.03
RTN1-202ENST00000342503 FOXI2Q6ZQN5 318 aa14.89□□□□□ -0.03
RTN1-202ENST00000342503 HIVEP2P31629 2446 aa14.89□□□□□ -0.03
RTN1-202ENST00000342503 D6R8Y8 96 aa14.89□□□□□ -0.03
RTN1-202ENST00000342503 HSBP1O75506 76 aa14.89□□□□□ -0.03
RTN1-202ENST00000342503 MTORP42345 2549 aa14.88□□□□□ -0.03
RTN1-202ENST00000342503 PROK1P58294 105 aa14.88□□□□□ -0.03
RTN1-202ENST00000342503 CACNG7P62955 275 aa14.88□□□□□ -0.03
RTN1-202ENST00000342503 DMRTA1Q5VZB9 504 aa14.88□□□□□ -0.03
RTN1-202ENST00000342503 TIMM8BQ9Y5J9 83 aaPredicted RBP14.88□□□□□ -0.03
RTN1-202ENST00000342503 ASIPP42127 132 aa14.87□□□□□ -0.03
RTN1-202ENST00000342503 RNF185Q96GF1 192 aa14.87□□□□□ -0.03
RTN1-202ENST00000342503 AGRNO00468 2067 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 IGHV4-4A0A075B6R2 117 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 TRAV12-3A0A0B4J271 114 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 C7orf71A4D174 169 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 GNRH2O43555 120 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 SCGB1D1O95968 90 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 RAB4AP20338 218 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 DEFB131AP59861 70 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 CD300EQ496F6 205 aaPredicted RBP14.86□□□□□ -0.03
RTN1-202ENST00000342503 SPANXN1Q5VSR9 72 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 ORMDL3Q8N138 153 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 CHCHD1Q96BP2 118 aaKnown RBP14.86□□□□□ -0.03
RTN1-202ENST00000342503 PRELID3AQ96N28 172 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 GSN-AS1Q9NRJ2 163 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 KNCNA6PVL3 124 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 LINC00614P0C842 121 aa14.86□□□□□ -0.03
RTN1-202ENST00000342503 S100A4P26447 101 aaKnown RBP14.86□□□□□ -0.03
RTN1-202ENST00000342503 SMKR1H3BMG3 65 aa14.85□□□□□ -0.03
RTN1-202ENST00000342503 M0R2Z0 102 aa14.85□□□□□ -0.03
RTN1-202ENST00000342503 TRAV12-2A0A075B6T6 113 aa14.84□□□□□ -0.03
RTN1-202ENST00000342503 TCF21O43680 179 aa14.84□□□□□ -0.03
RTN1-202ENST00000342503 MED14OSP0DP75 135 aa14.84□□□□□ -0.03
RTN1-202ENST00000342503 CKS2P33552 79 aa14.84□□□□□ -0.03
RTN1-202ENST00000342503 AMTNQ6UX39 209 aa14.84□□□□□ -0.03
RTN1-202ENST00000342503 SPRY2O43597 315 aa14.83□□□□□ -0.03
RTN1-202ENST00000342503 NCR2O95944 276 aa14.83□□□□□ -0.03
RTN1-202ENST00000342503 FOSL1P15407 271 aa14.83□□□□□ -0.03
RTN1-202ENST00000342503 TSPOP30536 169 aa14.83□□□□□ -0.03
RTN1-202ENST00000342503 CDKN1BP46527 198 aa14.83□□□□□ -0.03
RTN1-202ENST00000342503 SPINK13Q1W4C9 94 aa14.83□□□□□ -0.03
RTN1-202ENST00000342503 FAM159AQ6UWV7 190 aa14.83□□□□□ -0.03
RTN1-202ENST00000342503 ADARB2-AS1A8MUL3 147 aa14.83□□□□□ -0.04
RTN1-202ENST00000342503 EVI2AP22794 236 aa14.83□□□□□ -0.04
RTN1-202ENST00000342503 KRTDAPP60985 99 aa14.83□□□□□ -0.04
RTN1-202ENST00000342503 S100A12P80511 92 aa14.83□□□□□ -0.04
RTN1-202ENST00000342503 PMCHL1Q16048 86 aa14.83□□□□□ -0.04
RTN1-202ENST00000342503 MAP6D1Q9H9H5 199 aa14.83□□□□□ -0.04
RTN1-202ENST00000342503 SCRT2Q9NQ03 307 aa14.83□□□□□ -0.04
RTN1-202ENST00000342503 RNASE3P12724 160 aaKnown RBP14.82□□□□□ -0.04
RTN1-202ENST00000342503 HLA-DRB4P13762 266 aa14.82□□□□□ -0.04
RTN1-202ENST00000342503 ZNF124Q15973 351 aa14.82□□□□□ -0.04
RTN1-202ENST00000342503 NSUN5P1Q3KNT7 163 aa14.82□□□□□ -0.04
RTN1-202ENST00000342503 SMIM15Q7Z3B0 74 aa14.82□□□□□ -0.04
RTN1-202ENST00000342503 SPAG8Q99932 426 aaPredicted RBP14.82□□□□□ -0.04
RTN1-202ENST00000342503 HLA-DRB4X5D2U9 266 aa14.82□□□□□ -0.04
RTN1-202ENST00000342503 TRAV25A0A0B4J276 109 aa14.81□□□□□ -0.04
RTN1-202ENST00000342503 IGHV1-24A0A0C4DH33 117 aa14.81□□□□□ -0.04
RTN1-202ENST00000342503 OR4C46A6NHA9 309 aa14.81□□□□□ -0.04
RTN1-202ENST00000342503 SIGLEC8Q9NYZ4 499 aa14.81□□□□□ -0.04
RTN1-202ENST00000342503 PHLDA3Q9Y5J5 127 aa14.81□□□□□ -0.04
RTN1-202ENST00000342503 LOC389332A0A1B0GUA5 103 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 H3BMM0 161 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 M0R381 172 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 NPYP01303 97 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 KRTAP10-3P60369 221 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 PRSS3P2Q8NHM4 247 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 ZNF256Q9Y2P7 627 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms