RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 VGLL1Q99990 258 aa10.62□□□□□ -0.71
TMEM248-201ENST00000341567 RRN3P1Q2M238 152 aa10.62□□□□□ -0.71
TMEM248-201ENST00000341567 IGF2BP2-AS1Q96M15 143 aa10.62□□□□□ -0.71
TMEM248-201ENST00000341567 C19orf84I3L1E1 186 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 P0C879 139 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 CKS1BP61024 79 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 ZNF491Q8N8L2 437 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 PRR25Q96S07 402 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 MSRB1Q9NZV6 116 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 TRAV21A0A0B4J279 112 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
TMEM248-201ENST00000341567 F6UB75 175 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 IGKV1-17P01599 117 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 LYPD1Q8N2G4 141 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 Q96MF0 132 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 ZNF292O60281 2723 aa10.61□□□□□ -0.71
TMEM248-201ENST00000341567 A8MWV9 139 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 TAX1BP3O14907 124 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 Q8N7P7 452 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 LTAP01374 205 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 DEFB1P60022 68 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 KLF5Q13887 457 aaPredicted RBP10.6□□□□□ -0.71
TMEM248-201ENST00000341567 GDF5OSQ5U4N7 250 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 NEGR1Q7Z3B1 354 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 LINC00477Q96M19 166 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 ANAPC13Q9BS18 74 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 SMPXQ9UHP9 88 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 A0A1W2PPM0 123 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 K7EP34 96 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 NDUFS8O00217 210 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 IGHV4-59P01825 116 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 WIPF2Q8TF74 440 aaPredicted RBP10.6□□□□□ -0.71
TMEM248-201ENST00000341567 VCX2Q9H322 139 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 A0A087WWL8 130 aa10.6□□□□□ -0.71
TMEM248-201ENST00000341567 LINC00322Q6ZN03 302 aaPredicted RBP10.59□□□□□ -0.71
TMEM248-201ENST00000341567 UBE2E2Q96LR5 201 aa10.59□□□□□ -0.71
TMEM248-201ENST00000341567 IGLV1-47P01700 117 aa10.59□□□□□ -0.71
TMEM248-201ENST00000341567 HOXB4P17483 251 aaPredicted RBP10.59□□□□□ -0.71
TMEM248-201ENST00000341567 LGALS9BQ3B8N2 356 aa10.59□□□□□ -0.71
TMEM248-201ENST00000341567 LGALS9CQ6DKI2 356 aa10.59□□□□□ -0.71
TMEM248-201ENST00000341567 C2orf70A6NJV1 201 aa10.59□□□□□ -0.71
TMEM248-201ENST00000341567 CGB3P0DN86 165 aa10.59□□□□□ -0.71
TMEM248-201ENST00000341567 CGB7P0DN87 165 aa10.59□□□□□ -0.71
TMEM248-201ENST00000341567 TEX29Q8N6K0 151 aa10.59□□□□□ -0.71
TMEM248-201ENST00000341567 CSTL1Q9H114 145 aa10.59□□□□□ -0.71
TMEM248-201ENST00000341567 H7C1H1 209 aa10.58□□□□□ -0.72
TMEM248-201ENST00000341567 RNASE1P07998 156 aaKnown RBP10.58□□□□□ -0.72
TMEM248-201ENST00000341567 THAP8Q8NA92 274 aa10.58□□□□□ -0.72
TMEM248-201ENST00000341567 TEX48A0A1B0GUV7 120 aa10.58□□□□□ -0.72
TMEM248-201ENST00000341567 PRSS46E5RG02 174 aa10.58□□□□□ -0.72
TMEM248-201ENST00000341567 SH2D6Q7Z4S9 175 aa10.58□□□□□ -0.72
TMEM248-201ENST00000341567 KLHL30-AS1Q8NEE0 82 aa10.58□□□□□ -0.72
TMEM248-201ENST00000341567 LINC01549A6NIU2 74 aa10.58□□□□□ -0.72
TMEM248-201ENST00000341567 PPP1R17O96001 155 aa10.58□□□□□ -0.72
TMEM248-201ENST00000341567 EGR2P11161 476 aaPredicted RBP10.58□□□□□ -0.72
TMEM248-201ENST00000341567 TNFRSF18Q9Y5U5 241 aa10.58□□□□□ -0.72
TMEM248-201ENST00000341567 TRAV12-2A0A075B6T6 113 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 KNCNA6PVL3 124 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 K7EIM0 57 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 IGLV2-8P01709 118 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 CR1LQ2VPA4 569 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 TRBV7-1A0A0A6YYK4 115 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 SPINK8P0C7L1 97 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 HTN3P15516 51 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 DEFB136Q30KP8 78 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 LINC01356Q8N9X3 169 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 ANKRD17O75179 2603 aaKnown RBP10.57□□□□□ -0.72
TMEM248-201ENST00000341567 PLNP26678 52 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 FAM110DQ8TAY7 271 aaPredicted RBP10.57□□□□□ -0.72
TMEM248-201ENST00000341567 DLX4Q92988 240 aaPredicted RBP10.57□□□□□ -0.72
TMEM248-201ENST00000341567 IGHV7-81A0A0B4J1V7 117 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 TSPAN13O95857 204 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 SLC25A16P16260 332 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 DTX2Q86UW9 622 aa10.57□□□□□ -0.72
TMEM248-201ENST00000341567 LINC01548A6NM66 108 aa10.56□□□□□ -0.72
TMEM248-201ENST00000341567 AZU1P20160 251 aa10.56□□□□□ -0.72
TMEM248-201ENST00000341567 FRYQ5TBA9 3013 aa10.56□□□□□ -0.72
TMEM248-201ENST00000341567 CENPVL3A0A0U1RRI6 287 aa10.56□□□□□ -0.72
TMEM248-201ENST00000341567 IGHV3-53P01767 116 aa10.56□□□□□ -0.72
TMEM248-201ENST00000341567 PDE6HQ13956 83 aa10.56□□□□□ -0.72
TMEM248-201ENST00000341567 DEFB112Q30KQ8 113 aa10.56□□□□□ -0.72
TMEM248-201ENST00000341567 C19orf54Q5BKX5 351 aa10.56□□□□□ -0.72
TMEM248-201ENST00000341567 GP9P14770 177 aa10.56□□□□□ -0.72
TMEM248-201ENST00000341567 LOXL1Q08397 574 aaPredicted RBP10.56□□□□□ -0.72
TMEM248-201ENST00000341567 CIRBPQ14011 172 aaKnown RBP10.56□□□□□ -0.72
TMEM248-201ENST00000341567 SPINK13Q1W4C9 94 aa10.56□□□□□ -0.72
TMEM248-201ENST00000341567 PAPPA-AS1Q5QFB9 102 aa10.56□□□□□ -0.72
TMEM248-201ENST00000341567 IGLV2-23P01705 113 aa10.55□□□□□ -0.72
TMEM248-201ENST00000341567 TOMM7Q9P0U1 55 aa10.55□□□□□ -0.72
TMEM248-201ENST00000341567 C8orf86Q6ZUL3 223 aa10.55□□□□□ -0.72
TMEM248-201ENST00000341567 ERG28Q9UKR5 140 aa10.55□□□□□ -0.72
TMEM248-201ENST00000341567 SPTBN5Q9NRC6 3674 aaKnown RBP10.55□□□□□ -0.72
TMEM248-201ENST00000341567 H3BRN7 92 aa10.55□□□□□ -0.72
TMEM248-201ENST00000341567 DEFB131AP59861 70 aa10.55□□□□□ -0.72
TMEM248-201ENST00000341567 C2orf66Q6UXQ4 117 aa10.55□□□□□ -0.72
TMEM248-201ENST00000341567 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
TMEM248-201ENST00000341567 DYNAPQ8N1N2 210 aa10.54□□□□□ -0.72
TMEM248-201ENST00000341567 DAZ1Q9NQZ3 744 aaKnown RBP10.54□□□□□ -0.72
TMEM248-201ENST00000341567 TRGV2A0A075B6R0 118 aa10.54□□□□□ -0.72
TMEM248-201ENST00000341567 C9JAW5 83 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms